Basic Information

Insect: Apis mellifera
Gene Symbol: JARID2
Assembly: GCA_003254395.2
Location: NC:11016948-11024890[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.7e-23 9e-20 70.0 0.0 6 89 1389 1470 1385 1470 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.7e-23	9e-20	70.0	0.0	6	89	1389	1470	1385	1470	0.94

Sequence Information

Coding Sequence: atggtATTAAGtcgaaatgataaaagaaaaagaaaagaaggagattTGGTGGATCTTATGGATCCACTTTCAGAATCTCCAAAGAGgacTAAAGTACATGCACAAAGAAAATTTGCACAAGGTGCAACAACAGTTTTTAATCCTTCACATACTCCTATtaaggataaagaaaaaactaagCCAGCAGTTATAACAGAATTAATAACTCATAAGCGACCAAATACAGAAGACTTTTTGACATTTTTGTGCTTTAgaggAACATCAATTTTACCtccaagtttaaatttttttaatgttggtaataaaaaagaaaaattggatccTAAGCCAATACGTACtatgatagataaaaatataacttcaaCTAATATATCTGTTGAAAATCAAAAGCCAGAATCAAGTCAGAAAACTACTACTAAAATAAAACCTGTTATTgctgataaaaagaaagttccaaatacaataaaaaaaaatatttcaacatttaaAAGTACAACATCTACTGTACAagcacttaaaaaaaaatatcaagaacaGCGTCTTGCTAagcaaaggattaaaaataaatttaaaacatcatGTGTTATGAGAACAAGATCTTGTACAGAACGAACATTGTTAAaatctgtaaataaattagcacccagaaaatttttaccaagaattgaaaataaaagactTGGTTTGAGAAGTAGTGTGCTTgcagataaaacaaaaaaaggtcCATCAAAAGTTAAATCTATATCACCTaaaccaaagaaaaaaattataatgaaacaaaaaaatagtgATACATCAAATTCAGATTCTACATCTGAAGAAGAAGGTCCTTCAGAAAAATCAGTACCACAGATAAAACGTACAATTCAAAAAACtgttcagaaaaatatatgtacaagaAGTAAATCTGAAATGAGAAGAATTACACGTTCTCATAGTGGTACAATTTCTCCAAAAAATCTTTGTAGAAGACCAACAAGAAAAACTAAAGAAGCAGCTGCAGtatatatggaaattttaGGTCGAAAACTTGTAAGTCCTGATTTagaaaatgatgataatatttctatggATAGTTTTCCAGAATTACCAAATACACGTAAAATTTCTCAgacagaaaatgaaattaaaaataaagtaaaacaaTCTATTACAAAAAcaactaaaaataaagataataaaatttcttctatccATAATACATCAAATAAAAGATTGGATAAaactaaaacaaataaaattacttttaaaagtaaaagattaataagagTTCATAAATATTGTGAAGTTGATAGTGATGAAGAATCTATTAGTTCCAATGGAACTAATAATACAAGACCTGTTACAAGAAGAAGTTTagggaaattaaataaacctATAAACCGATATCTTAGATCTTCTACTAAAAATGTGACTacaagaattgaaattgaagataatgtaaacattaaatcaaaatctcaagttcaaaataatttaaaatttaataaggaaaaatttgtaatgaaaCGTAAACGAGAACagaatacaaataaatcattatctgaaaaaattaatggattaaaacaaaaagaaataaaaaatactgtaATTGAAAGTACAGATTCTGATGAAGAAACATTAGGTATgttacttaataaattaaaaagaaaaaagaatgataatatacaaaaagatattattaataaaaataatgatcatAAAAgtgaagataaaattgaacaacctttaaaagaaaatttagtcAAAACtgatctttcaaaaatatcagatGATGAAGAATCTTTTCGAGGATTTACAAAAAAAGCAATATCCAAAGTATTAAATTCGTGTCAAACACATGTTAATGTTAATCTTCTTGTCACAAAAAAAACGAATGACAAATTAGAAACAACTAAAATAGAAGATGAACAAACTTCAAATGTAActaataaacaagaaaatgaaagagaattatcaaataatgaacctctattaaatacaaattcttcttcaatGATACATGTAGTAGATAATCAGCATCAAAAACTTGAAAAGGATAAATTGGAATTGCCTGATTTAGTATCTGATGAAATAGaacataaaatatcaatgaaaaataatgaaaaagaatgtcATCATAAAACAGAAATTTCTTCCATAGATATGTCTTTATCAACATTgcatataagaaaagaaaaagtaaatatgtCGACTGAACAAATTGAAAAGTGGTTGAATGAAAGTTCACTTGCTAAAGAAGAAAGTAAATTAGAAATGGAAAATGTATCTACTTTCAAATACGAtgcttgtgaaaaaaaaactgatatgtcacatttatcaatttcaacaaaaattcaaCATTTGGTAAGACCAGTTAATGTCACACTTTCTAAACTAACAGAAAAGGCTAATATAAAAGAtcgtataaatacatataataaatatgcccCTATTATAGCAGGAGAATTGCAATCTGATTTAAAACAACATAATGAACtatctaatattaatgttaataaacataatacaaattttaaagatataaataaaggattaaatataaaattgaataaagattCATGTTCTGGAGAAGAAGGTGAAATTGCATTAAAATCTGATCATACTTCAGTAGATAATtcaaatgagaaaaaattattaacagaaaagaaaactaTATTTCAACCAAGGAAACCATTTTTACCAAAAGTTAAAGAACGTAAAACAGTAACTCCTAATGCAAATGCATTTTCCCCAGAAAATGAAAGCAGTGTTTATGCATTTGAAAGTGATACAGAAGTTCCAGTTAATACTCCTTTTAGACGTAAAATTCGAGAATCTAATAAATCaaacatgaattttaatttatctgaaACTAACCCAagtaaatctgaaaataatgcaaataaatctaagaataatacaaataaatttgataataatgcaaataaatctgaaaataatacaaataaatttgataattcaaataaatccgaaaatataacaaataaatctgaaaatgaagcaaataaaaatattgaaaaagcaagcaaaaataattgtgaacgaacatttaaagaaaattccaacaattcttcaaaaaatgaaaatgaaatagtagaaataaaaaatatgtcaaatactactttaaatgtaaataaatttgaattagcaaaaaattttgcaacttTAGCAAATATACAAGTTTTACCACTTGATAAATTAACAACAACTTGGAGTAATGTAAATTGTAGTACATCAATAGCAGTACAAGTAAATCTTGATGATAATGTACAAACACAAAAACAAATAACAGAAGGAGATGTAAATCAACAAAAAAGTACAGAAATATCTACTCAAACTGAGagcaataatgaaaatgatgatgaaaatgatggtcaactattttatatacctTTAGCTGCTGTCACAAGAAATGGACCAAATTTAATTCAAGGACAGCAATTAATTCAAGGTGTAGCTGTAAAACTTGGCACTGAAGGACCAAATGGTCCTAATCAAAAAGTTCTTTTAAGAGCAAAATTAGTTACCAAACCTCCATCATCAATAGCACGTTGTCCTCCTATAGGTACAGTGCAACCTACAACTCGTAGTCCACCTAACTCTACTCTTATAACAACTGATCATTCAATACCATCTActtcttcaaatattacatCTATTGTTAGTACATCTAATTCTGAATTTCAATCATCTTCTCTAAGCAAAAATGAAAACATATTACAAACAACAAATAGACAAACTATTGGAACTGCATTAAATAtaggaattgaaaaattaccaAAATCCCCAAAAACTtctagagaaagaaaaacatcaATTGATTCAAATAAGAACGGAAAAcgatgtcaaattaaaacaaaacataaaggttttgaaaattattctccaACTAATAATGTAACATTTCCAAAtgcaaaagatgaaaataacgAAGCACGATTAGTTGAGGCTCCAACATTTCATCCAagtgaaaaagattttcaagatCCTctagaatatatagataaaataagaccaattgcagaaaaatttggaatatgcAGAGTTGTACCACCAcctaattttaaaCCGGAATGCAAAGTGTCAGATGATATGCGATTTACAGCTTATAATCAATATGTACATCGTATGCTACATAGGTGGGGTCCCAATGTGAAAGAAATGAtggctataaaaaaatatttagctaCACAAAGTATAACATTAACTCATCCACCTTGGattggtGGAATGGAAGTTGATTTGCCTCATTTATATCAAACAGTTCAAAGTTTAGGTGGATTAAAAgaagttattgaaaaaaagaagtggCAAAAAGTAGCTGATGGAATGAAAATACCAAAATCTGCTCAAGATCGTGTAACTAAATTAGATgatatttattgcaaatatttattaccatATGATACATTATCACCagagGAACGAGgtaaattatttgatgaagTTGAATCTGAatggataaaaagagaaagtaaAGTTCTACAAAGGCAAAATGCaccaataaatgaaaatgatgaagaagaagatgatgatAGTTCTGATGAAATTGAGGAATGTATTGTAAAAGGTAGAAATATGCCGTTAAATGCATTTTATCGTATTGCACGAAATACACAACGTATGTGGTTCGGTGAAAATCAACGATCTGGAAATGAATCTGAAGGTGCTTCTGCTGATGAAGTTGAAAGTGCATTTTGGAAACATGTAGCAGAAAGAAAACGACATGTTTGTGTACATGCTGCAAGCATTGATTCAAGTGGACGTGGTTTTGGATTTTCAGTTGCTAAAAATAGTCCATTTGCAAGACATCCATGGAATCTTAAAGTACTTACTAATAATGCTGGATCAGTATTAAGAGCTTTAGGTCCCATAATgggtgTGACAGTACCAACACTTCATGTAGGCATGTTATTTAGCGCATGTTGTTGGTACCGTGATCCTCATGGTCTTCCTTGGATAGAATATCTACATACTGGTGCTAAGAAGATTTGGTATGGTATACCAGATGaacataacaataattttagagAAGCTCTTTCAAAAATGGTTCCacgatattgtaaaaataaaactatatggCTACCATCAGATACAGCAATGGTTCCTCCAGAATTATTGGTTAGTAATGGAGTATCATTATGTCAGACTGTACAAGAACCAGGAcagtttataattgtatttcctAAAGCATTTACATCGAGTATATGTACTGGTTATGTAGTATCTGAAAGTGTTTATTTTGCACAACCATCTTGGTTGGAAACTGCTGAACAAGTATTTAAAgATATACAAGATAGTTGTGAAccatcaatattttcatttgaaagattattatttaatattattaatgactCTAGATCTCATATAGAAGTATTAAAACAGattttaccaagtgtaattaaaattcgcgaaaaagaaataaattatcgtaaaGAATTAGAATCAGTAGGTCTcacaaataaagaaagattacCCTTGCCAGAtagtggaaaaagaaaaaaaggaaaaaaagtgaaagaagATGATGGTGACTTTGAATGTGAAACTTGTAGagctaatttatttgtttcattagtTAATAATTCACAAGATGATAgtgtttattgtttattacatgcattacaattatttaatagaaaaaagcaaattttaaaacattttactcTAATGTATACGTATAATGAGgaagaattaaatgatttgattcataaattagaagaaagaattgaagCCAAATCTAAAAAGACtaatcaaattaaacaaacaaaataa
Protein Sequence: MVLSRNDKRKRKEGDLVDLMDPLSESPKRTKVHAQRKFAQGATTVFNPSHTPIKDKEKTKPAVITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGNKKEKLDPKPIRTMIDKNITSTNISVENQKPESSQKTTTKIKPVIADKKKVPNTIKKNISTFKSTTSTVQALKKKYQEQRLAKQRIKNKFKTSCVMRTRSCTERTLLKSVNKLAPRKFLPRIENKRLGLRSSVLADKTKKGPSKVKSISPKPKKKIIMKQKNSDTSNSDSTSEEEGPSEKSVPQIKRTIQKTVQKNICTRSKSEMRRITRSHSGTISPKNLCRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNISMDSFPELPNTRKISQTENEIKNKVKQSITKTTKNKDNKISSIHNTSNKRLDKTKTNKITFKSKRLIRVHKYCEVDSDEESISSNGTNNTRPVTRRSLGKLNKPINRYLRSSTKNVTTRIEIEDNVNIKSKSQVQNNLKFNKEKFVMKRKREQNTNKSLSEKINGLKQKEIKNTVIESTDSDEETLGMLLNKLKRKKNDNIQKDIINKNNDHKSEDKIEQPLKENLVKTDLSKISDDEESFRGFTKKAISKVLNSCQTHVNVNLLVTKKTNDKLETTKIEDEQTSNVTNKQENERELSNNEPLLNTNSSSMIHVVDNQHQKLEKDKLELPDLVSDEIEHKISMKNNEKECHHKTEISSIDMSLSTLHIRKEKVNMSTEQIEKWLNESSLAKEESKLEMENVSTFKYDACEKKTDMSHLSISTKIQHLVRPVNVTLSKLTEKANIKDRINTYNKYAPIIAGELQSDLKQHNELSNINVNKHNTNFKDINKGLNIKLNKDSCSGEEGEIALKSDHTSVDNSNEKKLLTEKKTIFQPRKPFLPKVKERKTVTPNANAFSPENESSVYAFESDTEVPVNTPFRRKIRESNKSNMNFNLSETNPSKSENNANKSKNNTNKFDNNANKSENNTNKFDNSNKSENITNKSENEANKNIEKASKNNCERTFKENSNNSSKNENEIVEIKNMSNTTLNVNKFELAKNFATLANIQVLPLDKLTTTWSNVNCSTSIAVQVNLDDNVQTQKQITEGDVNQQKSTEISTQTESNNENDDENDGQLFYIPLAAVTRNGPNLIQGQQLIQGVAVKLGTEGPNGPNQKVLLRAKLVTKPPSSIARCPPIGTVQPTTRSPPNSTLITTDHSIPSTSSNITSIVSTSNSEFQSSSLSKNENILQTTNRQTIGTALNIGIEKLPKSPKTSRERKTSIDSNKNGKRCQIKTKHKGFENYSPTNNVTFPNAKDENNEARLVEAPTFHPSEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVESEWIKRESKVLQRQNAPINENDEEEDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGNESEGASADEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPIMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVSNGVSLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDSRSHIEVLKQILPSVIKIREKEINYRKELESVGLTNKERLPLPDSGKRKKGKKVKEDDGDFECETCRANLFVSLVNNSQDDSVYCLLHALQLFNRKKQILKHFTLMYTYNEEELNDLIHKLEERIEAKSKKTNQIKQTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01424161;
90% Identity: -
80% Identity: -