Basic Information

Insect: Apis mellifera
Gene Symbol: retn
Assembly: GCA_003254395.2
Location: NC:14437269-14535093[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 3.2 5e+03 -2.9 0.0 67 82 204 220 184 221 0.70

2 2 4.8e-26 7.5e-23 79.8 0.0 2 89 227 312 226 312 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	3.2	5e+03	-2.9	0.0	67	82	204	220	184	221	0.70
2	2	4.8e-26	7.5e-23	79.8	0.0	2	89	227	312	226	312	0.96

Sequence Information

Coding Sequence: ATGGAAATGAGCGACGAATATCAGGACATGGGAAACCCTGGAGGAGGGGTCGCGGTGGTCAATATACCGATGGCCCATCATCAGCATTCGCCCGATAGTCCGCTGTCGCATCAGGAAGAAGATCTGTCCGATCCGGATCTTCAGGATGAAGAGAGCGGCGAGGAGTTACCTCAGCAACCACTTCAAGGTAACACGCACTCCTCGACGGATAGTGCATCCGCGCAGGCTGGTACACCTACTCCATTAACACACTTGAACAGTCTGATGGGTGCACATCATCCGCACTTTCTGGCAAAATTGAAGATGGAGCCCACCGATATGGACGCTTTGAACAACAAGAGCGGTTTAGAAGCGTTGCAAGCGGCAATGGGCGGAAGTGGTTTCAATCTGCCATTCTCGTTTCCACCACCCGCGTTTCTGACGCCCCAACACCACTCGCAAAACAGTCACGCGCAATCTGGTGGTAGTATCGGGAGCGGGGTTGGAAATCAAGTGACGTCGTCGGCTAGCTCACATTCTAGCGAGTCTTCACAGGGGAGCGCTAGAAACGGTGGCGAGCCTCGCGAGACCAACAATCAGTCTCAGGGTAATACGGCGGGAGCGAATCACCAGCAGCAGACCAGTTGGAGCTTCGAAGAGCAGTTCAAACAGCTTTACGAGATCAACGACGATCCGAAAAGGAAGGAATTCCTGGACGATCTCTTCAGTTACATGCAAAAGCGAGGAACGCCGATCAATCGACTGCCGATCATGGCGAAATCGGTACTGGATCTGTACGAATTGTATAATTTGGTGATAGCGAGAGGTGGCCTCGTTGACGTGATCAACAAGAAGCTTTGGCAGGAGATCATCAAAGGCCTACACTTACCATCGAGTATCACTTCCGCCGCGTTCACTCTGCGTACCCAGTACATGAAATACTTATATCCGTACGAATGCGAGAAGAGACGACTGTCGACACCCGCAGAGTTGCAAGCGGCGATCGATGGGAATCGTCGCGAGGGACGACGAAGCAGCTACGGGACATACGCGGCAAGCGGCAGCACGACGAACGAGAGCCTCGTTCAAAGGAATCCCCACACGCCCAACTCGTTGGCGTTGCACGCGCAAATGTCCCCGTTGTCTTTGGTCACAGCAGTTGCAGCCGGTGGCCAGCACCACGGATCCCAGTCGCTGGTAAACGGCAGCGCTGCGCACACCCCATTGCCGCACCACCCGCACCATCCTCAACACTCCCAGGGCCTACCGGGACAACCACCGAATGCAGGCCCTATACCCGGAATGGCGCCATCCGAATTCGAAGCACGCATGGTGGAATACGTAAAACTGTTGAACAAGGAATTGAGAAGCGGAACACCGCCACCAATGGGGCACAGGCCGGGAAGCGCATCTCCCCCGTCCTCGACGCCGTCGAGAGACGGGGCGTTCAGCGCCCTGGAAATGTCACGATTGACCTTGTGGAACATGTACAACAACAACACCTTGTATCCAGGGGTCGGCCACCAACCACCCATCTCGCCCCAAACGTCTCATTCCCCGCTACCTCCGGCCTCCAGTCCCGAACCTCAGAGGGAAGCTCTTGATCTCGGGCTGAGTCGCGAGTTTCCCATTTTCAGGTCGTCGCCCGTATCCTCGCCGGCAAGGCAAAGCTCGCCGTCCTCGGGCGGCAGTATGCAAGTCAAGAGGGATACGGAACTGACCGTCGCCCCCGGACCTCCTCCCGCTAAAAGGTTACTCTCGGATGAGGACAGTCCGCCCGAGAAGAACGCCCCGGCCACTCTGGGCACGcacattaaaatttcaaatcgaggTGACGGCAGGAACGGCGACAATTCCTTAGTAGTCAGTATGGAGTTGAACGGGGTGATGTATCAAGGTGTTCTGTTCGCTCAAAGTGACAGCAGGTCCACGAGCAGTACAGCGTCcaccaacaacaacaataacgcGAAACCGTCGCGGAGTGTGGTCTCGTGA
Protein Sequence: MEMSDEYQDMGNPGGGVAVVNIPMAHHQHSPDSPLSHQEEDLSDPDLQDEESGEELPQQPLQGNTHSSTDSASAQAGTPTPLTHLNSLMGAHHPHFLAKLKMEPTDMDALNNKSGLEALQAAMGGSGFNLPFSFPPPAFLTPQHHSQNSHAQSGGSIGSGVGNQVTSSASSHSSESSQGSARNGGEPRETNNQSQGNTAGANHQQQTSWSFEEQFKQLYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGTYAASGSTTNESLVQRNPHTPNSLALHAQMSPLSLVTAVAAGGQHHGSQSLVNGSAAHTPLPHHPHHPQHSQGLPGQPPNAGPIPGMAPSEFEARMVEYVKLLNKELRSGTPPPMGHRPGSASPPSSTPSRDGAFSALEMSRLTLWNMYNNNTLYPGVGHQPPISPQTSHSPLPPASSPEPQREALDLGLSREFPIFRSSPVSSPARQSSPSSGGSMQVKRDTELTVAPGPPPAKRLLSDEDSPPEKNAPATLGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQSDSRSTSSTASTNNNNNAKPSRSVVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00360694;
90% Identity: iTF_00141623;
80% Identity: -