Alab017590.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Apis laboriosa
Gene Symbol
lolal
Assembly
GCA_014066325.1
Location
JACEOM010000046.1:609843-614809[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-26 1e-23 84.6 0.0 1 98 20 113 20 115 0.95

Sequence Information

Coding Sequence
ATGTCAAATCAAATATGTCTAAAATGGAAcagttttttaaacaatatcgcCACGAGTTTCGAAAGTCTTTGGGAGGAAGAAGGTTTAGTAGATGTGACATTGGCAAGTGATGGACAGTGTCTTACAGCTCATAAAGTGATTCTCTCAGCAAGTAgtccttttttcaaaaaagtttttcagacAAATCCCTGTCAACATCCAGTTATAATACTCCAAGATGTACACTTCAGTGAACTAGAAgctttacttatatttatatataaaggagaagtaaatattgaacaaaaaaatttgccAGCACTTTTAAAAGCTGCAGAAACATTACAAATCCGTGGTCTTTCGGGAGGAGATATATTTGCTAAAGAATCTTATAAAAGATTAGTAGAATTGGAACAGGCAGTAGAAGAAGGAACAGGtagtaaagaagaaaatccaaagaaaaaacaaaaattgaacaaacatcaaaattctatattagaaACAGCACTAACACCTAAAGTATCTCAAGTAGAAAGCACAGATGAGTCTACAACCAGTGAACAAGGTGGTAAAGAAGGagattatttattgcaaaaaaatatgcaaaatccAATCTATCAACGTTTAGAAATGAagatagAACCATTAGAAACTGTATTAGAAGATTCTCAAAAACAATCTTCAACGGACAAAGATCCAGCAGAAAGATTAGATACTGGACAACTTGAAGGAAATCAAGGATCATCGAAGCCGAATGTAACCGTAATCGCCGATGCACGAGAGGCCTCGACCCCTTCGCCCGAGCCGGAAACACATGCGAGATTTCCAATTGGCCTTGATCGAACACCACCTTGGAATACGTATCGACACAACGACGAGCTTTACTCgccgaattattcgaattcggAATCGATGCCCGATCATCAAGAATCCATGAACATACTCGTGGAACGGAATGCGAGAGTTCTGCGTTCTGTCTTTCCCACTTGTCCGGGGGCAGCTAACAATTCGGAATTCTCGGAGGAGACAGTGAAGGGTGCCACGGCGTATCCACCATTTCCGTGTCCGTTTTGCGACAGGGCGTACACAAGTTGGGGTTTTCGACGAAGGCACATCAAAGCCGTCCACACGATTTCACCATCTTTAAACTGTAAATGGTGCTTACAGGTTCTTCCTACGCATGCGGCTTGGAGAAGTCACGTAATATTAGCGCACAATCTGTCCGCAAGCGACGCGCATAATGGTCTCCTGATTTTGGAGGAGGCGCACATGGTTTTACAAATTGCACGCCCTACCAGGTTGGACACtttagttaatataattaaacagaaTTCTCAGCAGAACAACAATCAAGATACGAATTCACAAtcggagaaaaattga
Protein Sequence
MSNQICLKWNSFLNNIATSFESLWEEEGLVDVTLASDGQCLTAHKVILSASSPFFKKVFQTNPCQHPVIILQDVHFSELEALLIFIYKGEVNIEQKNLPALLKAAETLQIRGLSGGDIFAKESYKRLVELEQAVEEGTGSKEENPKKKQKLNKHQNSILETALTPKVSQVESTDESTTSEQGGKEGDYLLQKNMQNPIYQRLEMKIEPLETVLEDSQKQSSTDKDPAERLDTGQLEGNQGSSKPNVTVIADAREASTPSPEPETHARFPIGLDRTPPWNTYRHNDELYSPNYSNSESMPDHQESMNILVERNARVLRSVFPTCPGAANNSEFSEETVKGATAYPPFPCPFCDRAYTSWGFRRRHIKAVHTISPSLNCKWCLQVLPTHAAWRSHVILAHNLSASDAHNGLLILEEAHMVLQIARPTRLDTLVNIIKQNSQQNNNQDTNSQSEKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00983681; iTF_00224645; iTF_00684867; iTF_00360996; iTF_01418436; iTF_00761066; iTF_01122542; iTF_00230774; iTF_00227365; iTF_00221994; iTF_00221355; iTF_00219887; iTF_00225330; iTF_00625593; iTF_00183371; iTF_00860492; iTF_01071094;
90% Identity
iTF_00230774;
80% Identity
-