Alab009756.1
Basic Information
- Insect
- Apis laboriosa
- Gene Symbol
- dmd-4
- Assembly
- GCA_014066325.1
- Location
- JACEOM010000984.1:448030-450788[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-25 1e-21 77.6 10.7 1 47 21 67 21 67 0.99 2 2 0.56 5.2e+03 -1.6 0.3 3 8 349 354 348 356 0.76
Sequence Information
- Coding Sequence
- ATGTTGCGTGGAAAGAGTAAAAAAGTGGAGAATGAAGAGACAGAAGGTGAGCTGAAACAGAGGAGGCCGAAGTGTGCTCGGTGTAGAAATCATGGCTTGATTTCTTGGTTGAGGGGACACAAAAGAGAGTGTCGTTATAGGGAGTGTCTTTGTCCGAAATGTTCTTTGATTGCAGAAAGACAGAGGGTGATGGCTGCAcagGTGGCCCTTAAGAGACAACAGGCGGCAGAAGATGCTATTGCTCTAAAAATGGCTAAAGTCGCAACTGGTCAGAAGCTCAGTCGATTACCTCCGGGAAAAATATTTGGTATGGCAGTAACCGATCCAAAATCAATTGGGGATAGCAACAAACAAGAAAATCCTCCTTCAAAAGAGGACCTAGGAGATGAAGACTCGAAAAAGGACGACTCTTTAAATGATCAATGTCTCAATTCATCAGTGATTAAGGAGAGCACACCAAAGAACAAAAACCTAGTATTCAATGTGAACAATAGAGAGGAAACAAAAGAGAGCAGTGTGTCTCAAACTTCAGTGGAAACATTAGCTCGTCTTTTTCCCAATACAAAGCTCTCAGTACTACAATTAGTGTTGCAAAGATGTGGTCAAGATCTATTGAAAGCTATCGAATATTTTGCTAGTGACAGTTTTGGAATCAATTCGACAACTTATACTTCAGCCTTTCAGCCTCCTCAAAGCATTAACGAGGCCAGGTCTAACGAACAAATTGCTGGTACTATGTTGGCTCCAATTTATTCCAGTCtttcaagaaatttctatGGAGATGGCTATTGTTTCTTAAATATCGTTCCTGAACAATTTCCTAACAGTATAGTAGATGCAACAGCTTGTACCGCATTGCCAATCAAAAATAGTGGACATGAACAAGAAGGAGTAGCTTTAAATGttcaatacaataattatttcaattcagGAACGCAACAACAACTGAGAGATCATGTGTATACTCAAGTTACGGATCATCTTTCTCCAAGACCTAGTTTCCTTCATTTACCATCGGTATTGCCAGGAATTCCTTGTGTGCAACCTAATTGCTCTCAATGTATCTATAAATTTCCCTGA
- Protein Sequence
- MLRGKSKKVENEETEGELKQRRPKCARCRNHGLISWLRGHKRECRYRECLCPKCSLIAERQRVMAAQVALKRQQAAEDAIALKMAKVATGQKLSRLPPGKIFGMAVTDPKSIGDSNKQENPPSKEDLGDEDSKKDDSLNDQCLNSSVIKESTPKNKNLVFNVNNREETKESSVSQTSVETLARLFPNTKLSVLQLVLQRCGQDLLKAIEYFASDSFGINSTTYTSAFQPPQSINEARSNEQIAGTMLAPIYSSLSRNFYGDGYCFLNIVPEQFPNSIVDATACTALPIKNSGHEQEGVALNVQYNNYFNSGTQQQLRDHVYTQVTDHLSPRPSFLHLPSVLPGIPCVQPNCSQCIYKFP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00215728;
- 90% Identity
- iTF_00140611; iTF_00142484;
- 80% Identity
- -