Alab019004.1
Basic Information
- Insect
- Apis laboriosa
- Gene Symbol
- Usf1
- Assembly
- GCA_014066325.1
- Location
- JACEOM010001026.1:973190-975390[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.052 9.7e+02 1.0 0.0 11 38 138 166 137 168 0.81 2 2 4.1e-08 0.00075 20.6 0.4 17 48 217 248 214 251 0.95
Sequence Information
- Coding Sequence
- atggatattttgGAGCAGCATCTCGAACAACAGGATGTCAGTACTGTTAACGCAAAGGATGACGGTGGCACAGGAATTGTTATTGAAGAAGCGGAAATCGTAGACTGCGaagGAGAAACTGTTGCAGAAGATGGAATGCGTTACCAAGAAGCACTTGCATATAGAGTAGTTCAAGTAAATGGAACTACTGCTGGCAATGAAATAGAACTGCCAGTCACTCAACCAGGAAATAACACTGTACAAGTCCTAACATCCCCATTAAATGGACAGTTTTATGTTATTGGAAATGCTAATGATGTTTTCACAACTGCACAAGCTTCTAGATCATTGGTTCCTAGAACCACTACTTTACAAATAGAAACACCAAGGAATTGTACCACTGTATTAAAGAAGagAGATGATAGAAGAAGAGCCACTCATAATGAAGTTGAACGTCGACGAAgagacaaaataaataattggattgcaaaattgggaaaaattattcctgAATGCAATGCAGCTGCAAATGGAAGTGGTAGTGGTAGTGGTGAAGGAAAGGCAAATTATGAAACTCAGAGCAAAGGAGGAATTTTGTCAAAAGCCTGTGAATATATAACAGAATTAAGAGCAGCCAATCAGGGATTGGGGCAATGTTTACGTGATAACGAAAAACTACGACAAGAAATAACTGCTTTGAAACAACTTGTTGCGCAATTGAAACGTGAGAATCTTCAACTCAGATCACAAATCTCGCCCTCTACAGGAACGAACGTTGACGTTTGA
- Protein Sequence
- MDILEQHLEQQDVSTVNAKDDGGTGIVIEEAEIVDCEGETVAEDGMRYQEALAYRVVQVNGTTAGNEIELPVTQPGNNTVQVLTSPLNGQFYVIGNANDVFTTAQASRSLVPRTTTLQIETPRNCTTVLKKRDDRRRATHNEVERRRRDKINNWIAKLGKIIPECNAAANGSGSGSGEGKANYETQSKGGILSKACEYITELRAANQGLGQCLRDNEKLRQEITALKQLVAQLKRENLQLRSQISPSTGTNVDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070773;
- 90% Identity
- iTF_00183675;
- 80% Identity
- iTF_00141036; iTF_00141551; iTF_00140986;