Ador001398.1
Basic Information
- Insect
- Apis dorsata
- Gene Symbol
- -
- Assembly
- GCA_000469605.1
- Location
- NW:418475-425544[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0041 0.25 11.0 0.2 1 23 690 712 690 712 0.97 2 12 0.6 36 4.2 0.2 2 23 799 820 799 820 0.95 3 12 0.23 14 5.5 0.6 3 23 998 1018 996 1018 0.95 4 12 5 3e+02 1.3 1.0 1 11 1029 1039 1029 1045 0.85 5 12 0.00055 0.033 13.8 0.1 1 21 1096 1116 1096 1117 0.95 6 12 0.075 4.5 7.0 2.1 2 23 1143 1164 1142 1164 0.95 7 12 4.3 2.6e+02 1.5 0.1 1 23 1183 1205 1183 1205 0.95 8 12 3.5 2.1e+02 1.8 2.5 1 13 1212 1224 1212 1235 0.78 9 12 0.00064 0.039 13.5 0.3 1 23 1253 1275 1253 1275 0.97 10 12 0.0057 0.35 10.5 4.3 1 19 1723 1741 1723 1743 0.97 11 12 1.6e-05 0.00096 18.6 0.7 1 23 1932 1955 1932 1955 0.97 12 12 0.13 7.9 6.3 1.3 1 23 1957 1979 1957 1979 0.97
Sequence Information
- Coding Sequence
- atgaaaaatagttCTTATACgttaagaaaaagatttaaaaatgatactaTGGAACAATtgtcaaagaaagaaaataaattacaagttttatataaattgtgtaAGCCAGTGTatgtaaatatcataaaattaccaataaataaatcagagataaaaaaatgctgtgaaaaagattcatttataactcaaaaaaaagatatattaaaaaatagaaaacgaaaaaCTAAAGATTatgttaaaagaataaattccaaatataatcAGTTACATCATTTATGTAAATCAAAAACTAAAACTAAATctcaaaatgtattattttctaaagaaataaaaaataaagataaaacattacttataaagaatttatcaaaaaacattaaacaaCCAtgcataaaattacataaaatagatgaagtaatcaataaaatagcaCAAACATTtgcaaaaacaatttcaactAAAGAATGTgcaataaatagaatagaatgcATGAAAGAAAGTCAAActgaattaaatacatttattgcaGAATCAgtagaattattatctataaatactgataaaaatgaatatgttaaaaatcaagaaactgaaaatgcaataattaatccttatgtaaataaaattccacaATCAAATGAGTacagtgaaaataataataataaatcttctgattctgaaattataagaattactagaaaagaaaatttcaaaaagaaacgtaaaaatgatatgaatgatgattatgataataataataacaatgaaaataacaatatacataaaattactttaaataaaataaaaagattgaaaagaaatttaccaGAGAAaacattagaaattaatatagcaCATGAAGAtgctaaaaaagaatatatagatgaaaattcaatgttGCAATTAGGATCATTAGATGTtactaatgaattatttaatctatcagataaaaaaaatttaaatataaaggaaaatataaatatatcacagCAGGAATTaactatatcaaataaattatctacaaTATATGATTCTGATAATGAAAACAATGATCTTGATCAAAACATACAAGAAgataattccaattttatgcctttagaattaaatcttgtaagtattatagaaaatgataCTTCTGTAAACACAAGAAATCATGATATTATGGCAATTGAAAAACCAAttttaaaagacaaaaatattcaaaaatcaatacaagaatcatttaattctaatagacattttatacaaaaatataaactttttaaagaattaagaatctttttaataaaatttgatgctttgaaaaactttaataataaatattcagctaaagaaattgagaaattgatagaaacatatataaattcttcaacaaattttaatatttcaaaacttcaaaaaaataaaaaatctataaataaaatgtcacttacatttaaaaatgttaatgttaACTCTGATGAatctataaatcatatttcaaatttaaacatttgtgaaactgcaaataaaaatatttgcataactGCCAAAGAAATACAAAGCATAATTGaaccattattaattttttcaaaaaaatcatctttaaattcaattaataaagaaaaagtaaaaaaagaggaaaatttagaaattcaaaaaaattgtcataatttaacaaaaatatttgaaaacaaatctgaagaaagatttaagcaaaatagaattaataattcagaaCAAATATCAGATTTACTTTCTATTACTAAACCTATATTATCTTCTTCACATGAGTCTATTAATGAAACTTCTAACTTATcaaatgtatttgaaaatactgttaatattaaaaagtcaaTAAATATGTTAGATATAAATTCTGTAACAAAATCCACTAATGAAATGTTATGCTTAAAGGAAGAAATAGTAAAAACTTCTCTATGTAagcaaaaatcaatttcagaaAACATGAAAGTTAATACACATATTAAAGATACtacaaaaaatgttttaacttATTACTCTTCCATGATATCtccaataaaagataaaaaacttaaagatAAGAAAGAGACTAAAATTTCTACTTATAAATGTATTGTTTgtgatcttaattttaaagaatattctgATTTGCAGtcacatttaattattcatacacAAAAGCAAAGTAATACTTTATCAAGTatgtcgaaaaatattaatgaatcatCTGAAAAATCTCAAGAAATCGTAACTTGTTTTTCAGAAATAGAAATGTTAGAATCACCAAAAATATCTGAACAAAAAAATACGGAATATGTGTCAAAATTTCTTActagtgataataataaacaattaaagaaaaaagatataacaaaaaatttaataaataaagagaaaaagaaaaagattgaatgtattaataattcaaatgaatGTAGTATTTGTTTACAAGATTTTCTAACAAAAACTGATTTGGCAactcatatttatttacatacagAAAATGAATTGCAACAAGCTTATAAAGTtgcaaaacaaaaatcaaatgagaatgaaaagacaaaaaataaagaatttaaacaaagcaaaactaaaaaatttattgatagtaAAAGTAGTATAATATCTAACacaattcaaataaatgaaaaaattaacagTAAAGAAGAATTGTTATGTGTACAAGAATCAGATAAatcagataaattaattagagaaaattctaaaattaaagatataaaattcactgctttcaaagaaaatgatatgcaaaatatagaattaccaatgaaattagataaagagaaaataaataaaatagaatgtaccaaaaaatcatttacaatATGTGAATGTCACAAACCAggaatcaatgaaaattgcTTGCAAATTGAAATAGTTCTTCTTTGTCATACTTGTAGAGTGTTATATAGAAGTATAAAATGTTTTGAGACTCATTATCGTCTTCCTGAATATGCAGACTGTAATCAAAATTGCTTAAACAATGGTCGTTctccaaatttattttgtgCTACTtgcaatatgatatttaattcagTTCAAGATGTACGTCATCATTTAGAGATACACGcccgttttaaaaaaaattctacaatgGAATTTCGATGCAACATttgtaaagttatattttgtgGAATAGGAACtcttttctatattcattGGTCAAAACATGCAAGAGATTCTTTATGGATGGCTAATGAGCAATCATTTCCAaagaattctataataaactcaaaactaaaaaaaaattcttcaatgaatttaaatatatctacagAAGATTATATTCAAGTTGCAGAATATGTTTGCAACAATTGCAAATTACCTTTTATTAATGAAGATGATTTAAAAGAACATATTCAAAAGtgtaataaatctaatttatttaaaaatacaactaCTATAGAGAACTCTAATAACATTGTTCAGACAATAAAAGTAACTTGTAATTTATGTGACaacacttttaaaaaaaatgaattttataagcaCATAAAaagtaaacataattttagtGATCCTCAATTTCTTTGTATATCACTTGCAACTGcaaaattagtatttatttgCAGTATTTGTATGGTAAtaactgaaaatttttatgattttgagGATCATTGGTTGAcgcataatataattcatgtaAATTTTACTTGTACACATTGCAAtactaaatatcataatagtttaaattcttttatagaaCATGCtaaaaaacataaagaaagttataatatattgtcctGTATAGTGAATTAtgaaaaagcaaaatttatttgtgaattttgtaatattggtTTTAAGTCTTCTCAAAATATGCAAGAACATATTACTattcataaacaaatatattttaaaactgatCAAGTtacaaatcataataattctgcattattatcaaaaaaaaatcattcttccAATTTTACAGCAACTGTTGAGAAACAGATAGAGAAAACATCACAAATGAAAActcaaacaataaaaaaaataaataagatttgttCAACAAAATCTGGTATAGACAACGATACtgagaaattaatcaaaatactaGAAGGAAATGAAGATGATTCTGAGATAGTAATAGATTTGATAAACCAATCAGAATcattaaatgatgaaaaacgtaaggaaaaagaaattacttctAATAATACttctaatatattagaaacgtCTTGTATTAATCAAACTAatataatgttgaaaaataatataactaaatcACCAGTAACAAGTCTAAATGTTCAAACATCTTcacattttacaaatttagaatcttctccaaatattttaaattcacgaACATTTAATTCAAACGTTAAATATACGAATGTTTTGCAAGattcaaatatatcttcaaaaaagattaataataatgataataatcaacttgatccaaaaattaaaacaacagATGATCAATTAATCATAAAGAATATACAACctattcttcaaaataatgaaCCTCAAGATATAGTTTCAACtacaaaagaattagaatcagttttgaaaacattattaaaagaagaagaagaaattccaCCAAGAAAAGGATTTTTAAGAGTGAAAACTCTTGCAGAGCTTAGAGatcctataaaattaaataaacttgatGATCATGTTATTCAAAATGCTGGTGATTCtatcaatcattttaaaagtCATAATATTTTggatgaaaatgataaacaacataaaattaaagaaaaagacttatcttcaaaacaatttatagattttacttcgaacaaatttgagaaatcattatacgaaaaaacaacgcaatctcaaaaaaattcaaatatattaccaTTGTCTTtatctaattcaaattattcacaattaaATGTCTCTGAAATTCAACCATATAATacagtaataaataatcaacaaCAGCAGCGATTACAAACAaacataaatcaaaataaatattcatcttcTTCACAAGAAGTAATATCAGAAGTAACATCAATAAACCATAAAAATTTACCAACTTACGATATTGCTCGAACAACTACAACTATACCACATTCTATTTTGAAGAGTAATGATGgatctaataaaattgtaaaaactattaatgtacagcaaaatgtaaatatagcaCATACAACGTCttcttctattaataaaaatgatcaaatgtcttctttcaataatacaattaattcaaatcaatataaatgtcattattgtgatttttgtacagataatttatcaaacttGTTAAAACATAACTTACCAGGTAATCATATTAGCtgtgaaaaacaatatttacaacATAGTGAACAGAATAAAAAACTCAAAGAACTTGATAATTTACAAACAAAGACAAGAATTATGCAAAACCAAAATtcaagttataaacaatttcaacaatcaaatataaatcaatcaggaattaaatatacttCTTTGCCTACATGTTATCAATATCCTTATATTGCTACAAATAATTCAGATAAAAGTACTCCAATATTTAAGCAAAATCAGTCAATAATAACTAATCAATCGATAACAGAAAAtgtttcttctctttattataaaaatttaaatcataacgCTGGTGGAATAGTGATGAATCAAGTTGTTCCTGCTATACAGAACATACCAACAATAGAATTTATACAACAACCAACACAGCaacaaatatatcaatcaCAAGTTTACAATGAACCAACAACAATTATAGATGCTCAATATATGCAGCAATCACAGaatttagtaaatttttctGATGTTTACCAAATGACGAGCAATCAATATGAAGTAACTAAGCCAAATGTTACAACTTATGAAATTCGATACATATGTTCTTATTgtacgaaaaaatttatttctgaagATTTATTGCAGTtgcatatgaatatttttcataattttgtatgtaatatttgcaatttgcgtttatataattttaatgattttaatcttcataaaattaaacatacgaTATATTAA
- Protein Sequence
- MKNSSYTLRKRFKNDTMEQLSKKENKLQVLYKLCKPVYVNIIKLPINKSEIKKCCEKDSFITQKKDILKNRKRKTKDYVKRINSKYNQLHHLCKSKTKTKSQNVLFSKEIKNKDKTLLIKNLSKNIKQPCIKLHKIDEVINKIAQTFAKTISTKECAINRIECMKESQTELNTFIAESVELLSINTDKNEYVKNQETENAIINPYVNKIPQSNEYSENNNNKSSDSEIIRITRKENFKKKRKNDMNDDYDNNNNNENNNIHKITLNKIKRLKRNLPEKTLEINIAHEDAKKEYIDENSMLQLGSLDVTNELFNLSDKKNLNIKENINISQQELTISNKLSTIYDSDNENNDLDQNIQEDNSNFMPLELNLVSIIENDTSVNTRNHDIMAIEKPILKDKNIQKSIQESFNSNRHFIQKYKLFKELRIFLIKFDALKNFNNKYSAKEIEKLIETYINSSTNFNISKLQKNKKSINKMSLTFKNVNVNSDESINHISNLNICETANKNICITAKEIQSIIEPLLIFSKKSSLNSINKEKVKKEENLEIQKNCHNLTKIFENKSEERFKQNRINNSEQISDLLSITKPILSSSHESINETSNLSNVFENTVNIKKSINMLDINSVTKSTNEMLCLKEEIVKTSLCKQKSISENMKVNTHIKDTTKNVLTYYSSMISPIKDKKLKDKKETKISTYKCIVCDLNFKEYSDLQSHLIIHTQKQSNTLSSMSKNINESSEKSQEIVTCFSEIEMLESPKISEQKNTEYVSKFLTSDNNKQLKKKDITKNLINKEKKKKIECINNSNECSICLQDFLTKTDLATHIYLHTENELQQAYKVAKQKSNENEKTKNKEFKQSKTKKFIDSKSSIISNTIQINEKINSKEELLCVQESDKSDKLIRENSKIKDIKFTAFKENDMQNIELPMKLDKEKINKIECTKKSFTICECHKPGINENCLQIEIVLLCHTCRVLYRSIKCFETHYRLPEYADCNQNCLNNGRSPNLFCATCNMIFNSVQDVRHHLEIHARFKKNSTMEFRCNICKVIFCGIGTLFYIHWSKHARDSLWMANEQSFPKNSIINSKLKKNSSMNLNISTEDYIQVAEYVCNNCKLPFINEDDLKEHIQKCNKSNLFKNTTTIENSNNIVQTIKVTCNLCDNTFKKNEFYKHIKSKHNFSDPQFLCISLATAKLVFICSICMVITENFYDFEDHWLTHNIIHVNFTCTHCNTKYHNSLNSFIEHAKKHKESYNILSCIVNYEKAKFICEFCNIGFKSSQNMQEHITIHKQIYFKTDQVTNHNNSALLSKKNHSSNFTATVEKQIEKTSQMKTQTIKKINKICSTKSGIDNDTEKLIKILEGNEDDSEIVIDLINQSESLNDEKRKEKEITSNNTSNILETSCINQTNIMLKNNITKSPVTSLNVQTSSHFTNLESSPNILNSRTFNSNVKYTNVLQDSNISSKKINNNDNNQLDPKIKTTDDQLIIKNIQPILQNNEPQDIVSTTKELESVLKTLLKEEEEIPPRKGFLRVKTLAELRDPIKLNKLDDHVIQNAGDSINHFKSHNILDENDKQHKIKEKDLSSKQFIDFTSNKFEKSLYEKTTQSQKNSNILPLSLSNSNYSQLNVSEIQPYNTVINNQQQQRLQTNINQNKYSSSSQEVISEVTSINHKNLPTYDIARTTTTIPHSILKSNDGSNKIVKTINVQQNVNIAHTTSSSINKNDQMSSFNNTINSNQYKCHYCDFCTDNLSNLLKHNLPGNHISCEKQYLQHSEQNKKLKELDNLQTKTRIMQNQNSSYKQFQQSNINQSGIKYTSLPTCYQYPYIATNNSDKSTPIFKQNQSIITNQSITENVSSLYYKNLNHNAGGIVMNQVVPAIQNIPTIEFIQQPTQQQIYQSQVYNEPTTIIDAQYMQQSQNLVNFSDVYQMTSNQYEVTKPNVTTYEIRYICSYCTKKFISEDLLQLHMNIFHNFVCNICNLRLYNFNDFNLHKIKHTIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00142105; iTF_00142715;
- 90% Identity
- iTF_00142105;
- 80% Identity
- -