Basic Information

Insect: Apis cerana
Gene Symbol: stc_1
Assembly: GCA_029169275.1
Location: CM054916.1:1610500-1615103[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3 2.8e+04 -4.4 1.6 15 19 557 561 556 561 0.81

2 13 0.25 2.3e+03 -0.7 0.3 4 10 590 596 589 596 0.94

3 13 3.9e-05 0.36 11.5 14.9 4 19 607 622 605 622 0.93

4 13 3.9e-07 0.0036 17.9 16.8 1 18 658 675 658 676 0.97

5 13 5.1e-08 0.00047 20.7 9.2 1 19 714 732 714 732 0.98

6 13 3 2.8e+04 -4.6 1.3 6 10 762 766 762 766 0.96

7 13 2e-06 0.019 15.6 12.1 4 18 779 793 772 794 0.86

8 13 2.4 2.2e+04 -3.8 2.0 5 10 823 828 823 828 0.93

9 13 0.00088 8.1 7.2 8.4 1 11 834 844 834 845 0.97

10 13 3.6e-10 3.3e-06 27.6 13.8 1 19 861 879 861 879 0.98

11 13 3 2.8e+04 -7.4 8.9 14 18 931 935 918 936 0.71

12 13 6.5e-07 0.0059 17.2 13.6 1 16 972 987 972 998 0.85

13 13 1.2e-05 0.11 13.1 13.6 1 19 1004 1023 1004 1023 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3	2.8e+04	-4.4	1.6	15	19	557	561	556	561	0.81
2	13	0.25	2.3e+03	-0.7	0.3	4	10	590	596	589	596	0.94
3	13	3.9e-05	0.36	11.5	14.9	4	19	607	622	605	622	0.93
4	13	3.9e-07	0.0036	17.9	16.8	1	18	658	675	658	676	0.97
5	13	5.1e-08	0.00047	20.7	9.2	1	19	714	732	714	732	0.98
6	13	3	2.8e+04	-4.6	1.3	6	10	762	766	762	766	0.96
7	13	2e-06	0.019	15.6	12.1	4	18	779	793	772	794	0.86
8	13	2.4	2.2e+04	-3.8	2.0	5	10	823	828	823	828	0.93
9	13	0.00088	8.1	7.2	8.4	1	11	834	844	834	845	0.97
10	13	3.6e-10	3.3e-06	27.6	13.8	1	19	861	879	861	879	0.98
11	13	3	2.8e+04	-7.4	8.9	14	18	931	935	918	936	0.71
12	13	6.5e-07	0.0059	17.2	13.6	1	16	972	987	972	998	0.85
13	13	1.2e-05	0.11	13.1	13.6	1	19	1004	1023	1004	1023	0.97

Sequence Information

Coding Sequence: atggcTACTTGGGATGGTTCTTACTCAGGACCAGATGATCAAAATTGTTACGTTTATCCCGATCAAAATGTTTCTGGAACTACAACAAGAAACTGGACATTATTtcctaataatataaataatgattatttacaaCCTAATCACGAGTTTTATGTACAAAATGAACCtatatttgaacaaaataatcCAAATACTTTCTATCAATCAAATACAAATGTCGTGTCAAATTTATTGACCACAACCACTTATCATGATCATGTAACAAATTCTATAGGTAATACAgaagtattaaataatcaagaatattttccaaatgttGATTCTCagcaatgttatatatatgaaaacaatTGGAATTctgattatgatttattaaagaataagataaaacatgattctataaaaagaattaaaaagacttcaagtaatataacaaatcattcaaaattacaTGTTATGGCACAAGAATTTGTAccaaataataaagaagatgatgatagaaagaaaaataatgaattattaaatacaaagttTATTAATGATTCAGATGTTTGTGTTAAAGAAAGtaacaaaaaatcaaataaatatttcttttgtaatgCAAATagacatgaaaaaaaatataataacaaaagaaattctaattataaaccTAAAGAAGGACAACAAGATCaatgttataaaagaaatacaaatacaaattcatATCCACAACAAGTGAAGACaccttataaatttttaggtaataaatactttactaacaaatattattcaggaaaatctcaaataaattcaaaatatgtaaatgaagATGCATCAGAAAAACGTACAATGAATAACAATGATGCTTGTAATAGTAAAAAAGattctattacaaatttaagtaaaagagaaagagaatcatctttaaatatgaatataaataaaaataaaaatttatcaaatgagGACAATGATGAAAGATCTATTATTGCTGATAATATACAGTCTAATGATATATCACaatctaataatctaattaaggAATTAACTTACTATAATTCTGGTTTAAAACaaacttataataatcataaaagtataagaaaatataatgatagatataatagagaggaaaattataaagaaaagcaatttcaatatcaaggatataatagagaaaattaCTATAaggaagataaatttaaagtaagaAGCCAAATATGTAACAATGgagaatataatgaatataaagaaaattttagtgAGGAAACTGGATTAGAAACAAaggaagtaaaagaaaaaagacataaTTACCAAGGATATAGCGGATTTAAAGAACataataaagaaagtaaaatggaaatttttaaagaaaaagataaaaataaacattatgtatttggaaataaagaaaaaggaaatgaacATTGgcgaaataaaagagaaattagcgaaagaaataatatccaaAAACGAGGACAAAATAAAAAGTCACCAATtgATGATGATGCAAGTCAAAGAGAAAGATTAACAGAGCAGTTGAATAGAGGGCAATTGGAATGTTTAGTATgttgtgaatatattaaacaaaatgattatatttggtCATGTTCTAATTGCTATCATGTTCTACacttaaaatgtattaaaaaatgggCAAAATCATCGCAAGctgAAAATGGATGGAGATGCCCAGCATgtcaaaatgttaatttaataattcctgAAGATTACTTTTGTTTTTGTGGTAAAACAAAAGCACCTGAATGGAATCGTAGAGATGTTGCACATTCCTGTGGTGAAATTTGTGGTAGAATGttgtcaaaaaataattgtccTCATAAATGCACTCTTTTATGTCATCCAGGATCTTGTCCACAATGCACTGCAATGGTAGCAAAATATTGTGGCTGTGGTAAAACTTTACAAACAGTGCAATGTAgtgttcataaattattattgtgtgATTCCATATgtgataagaatttaaattgtgGTAGACATAAATGCCAAAAGAAATGTCATCATGGAGAATGTGCAAATTGTGAAGAAACAATAAcacaaaaatGTTTTTGTGGTAAAAATACAAGAGAAATAACTTGTCAAAGTAATATTTCACTTACATATTCTTGTGAAACAGTTTGtggtaaattattagaatgcgGCAATCATACTTGTACAAAATTATGTCATGCAGATGCTTGTGAATCTTGTTCTTTAATTCCTGAGAAAATTACAACTTGCTGTTGTGGACAAACACCATTAACAGATAAAAGACAAAGTTGTTTAGATCCAATTCctatatgtgaaaaaatatgttcgaaaaatttaaaatgtggaCAACCTAataaccCTCATAAGTGTAAAGCAAGATGTCATGAAGGAGATTGTCCTGTTTGTGATTTATCTACAGACGTTAAATGCCGTTGCGGAAATATGGATAGAGAAATAGCttgtaaagatttaatatcaaaagctGATGATGCaagatgtgaaaaaaaatgtataaagaaaagatCTTGTGGCAAGCACAAATGTAATCAATTATGTTGTATAGAAATAGAACATATTTGTCCATTAATTTGTTCTAAAACTTTAAGTTGTGGTAGACATAAATGTGAACAAAGATGTCATAAAGgaaGATGTCAACCTTGCTGGCGTAGTAGttttgatgaattatattGTGAATGTGGATCTTCAGTGATATATCCTCCTGTTCCATGTGGAACACGAAGACCTGTATGTGATAAACCTTGTTCTCGTCAGCATTCTTGTGGGCATGAAGTGTTGCATAATTGTCATAGTGAAATAACTTGCCCACCTTGTACTGTCCTCACTCAAAGATGGTGTCATGGTAAACATGAATTACGAAAAGCTGTGCCATGTCatgttaatgaaatttcatgtGGTTTATCATGTAATAAACCCATATCTTGTGGTCGACATAAATGTATTACTATTTGTCATCCTGGACCATGTGAAAAACCAGGACAACAGTGTTCTCAGCCTTGCACTACTTTAAGAGAAATGTGTGGACATATTTGTGCTGCTCCATGTCATGAGGGTAAATGTCCAGATACACCTTGTAAGGAAATGGTTaagGTGACATGTCAATGTGGACATAGAACTATGTTTCGTGTTTGTGCCGAAAATTCTAAAGAATATCAAAGAATAGCAAGTAGTATATTAGCTAGCAAAATGGCTGATATGCAACTAGgtcattctattaatttagaagaagTATTTGGTCAAGgagtaaaaaaacaaaatcaattaaaaactttagaaTGTAATgatgaatgtaaaataatagaacGGAATAGAAGATTGGCATTAggtttacaaattataaatccaGATTTAAGTGGAAAATTAATGCCTAGATATAGtgattttatgaaacaatGGGCTAAGAAAGATCCACATTTTTGTCAAATGgttcatgaaaaattaacaGAGTTGGTTCAGTTAGCAAAGATTTCTAAACAAAAATCACGCAGTTATTCTTTTGACAGCATGAATAAAGATAAACGTCATTTCATTCACGAGTCTTGTGAACATTTTGGTTGTGAAAGTCAGGCATATGATCAGGAGCCAAAAAGAAATGTTGTTGCAACTGCTGTAAAAGATaaatgtTGGTTACCTAGCTATAgtttattagaaattgtaCAACGAGAAAATGGTCAAAGAAAAGTTCCAGGTCCAATGTTAAATACTACAAAAACTGATGGATCTGTGAAgaCAATATTATCACTGCCTGCAAAAAAAACTCAAAAACCAGATACACCATCAAGCATAAAAACATCAGAGCcagaaatagattattttgattatcaaGGTTAA
Protein Sequence: MATWDGSYSGPDDQNCYVYPDQNVSGTTTRNWTLFPNNINNDYLQPNHEFYVQNEPIFEQNNPNTFYQSNTNVVSNLLTTTTYHDHVTNSIGNTEVLNNQEYFPNVDSQQCYIYENNWNSDYDLLKNKIKHDSIKRIKKTSSNITNHSKLHVMAQEFVPNNKEDDDRKKNNELLNTKFINDSDVCVKESNKKSNKYFFCNANRHEKKYNNKRNSNYKPKEGQQDQCYKRNTNTNSYPQQVKTPYKFLGNKYFTNKYYSGKSQINSKYVNEDASEKRTMNNNDACNSKKDSITNLSKRERESSLNMNINKNKNLSNEDNDERSIIADNIQSNDISQSNNLIKELTYYNSGLKQTYNNHKSIRKYNDRYNREENYKEKQFQYQGYNRENYYKEDKFKVRSQICNNGEYNEYKENFSEETGLETKEVKEKRHNYQGYSGFKEHNKESKMEIFKEKDKNKHYVFGNKEKGNEHWRNKREISERNNIQKRGQNKKSPIDDDASQRERLTEQLNRGQLECLVCCEYIKQNDYIWSCSNCYHVLHLKCIKKWAKSSQAENGWRCPACQNVNLIIPEDYFCFCGKTKAPEWNRRDVAHSCGEICGRMLSKNNCPHKCTLLCHPGSCPQCTAMVAKYCGCGKTLQTVQCSVHKLLLCDSICDKNLNCGRHKCQKKCHHGECANCEETITQKCFCGKNTREITCQSNISLTYSCETVCGKLLECGNHTCTKLCHADACESCSLIPEKITTCCCGQTPLTDKRQSCLDPIPICEKICSKNLKCGQPNNPHKCKARCHEGDCPVCDLSTDVKCRCGNMDREIACKDLISKADDARCEKKCIKKRSCGKHKCNQLCCIEIEHICPLICSKTLSCGRHKCEQRCHKGRCQPCWRSSFDELYCECGSSVIYPPVPCGTRRPVCDKPCSRQHSCGHEVLHNCHSEITCPPCTVLTQRWCHGKHELRKAVPCHVNEISCGLSCNKPISCGRHKCITICHPGPCEKPGQQCSQPCTTLREMCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMFRVCAENSKEYQRIASSILASKMADMQLGHSINLEEVFGQGVKKQNQLKTLECNDECKIIERNRRLALGLQIINPDLSGKLMPRYSDFMKQWAKKDPHFCQMVHEKLTELVQLAKISKQKSRSYSFDSMNKDKRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTTKTDGSVKTILSLPAKKTQKPDTPSSIKTSEPEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00217441;
90% Identity: iTF_00141523;
80% Identity: -