Aaln021227.1
Basic Information
- Insect
- Aphrophora alni
- Gene Symbol
- FTZ-F1
- Assembly
- GCA_963513935.1
- Location
- OY740766.1:112716822-112728680[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-51 3.4e-47 164.2 0.6 243 408 1 163 1 164 0.99
Sequence Information
- Coding Sequence
- ATGAAATTACTTCAGCATTCGTGGTCTGATATGTTGGTTTTGGATCACATGCATCAAAGAATGCACAACAGTTTGCCAGATGAAACAACATTACCTAATGGTCAGAAGTTTGATTTGCTCTCTTTAGGACTCTTAGGTGTACCATCATTAGCTGAACATTTTACTGAACTCACCGCTACACTGCAAGACCTAAAGTTTGATGTCAGTGATTATATTTGTGTTAAGTTCCTTCTATTATTAAACCCAGATGTTCGAGGCTTAATGAACCGGAAGCATGTGCAAGAAGGTCATGAGCAAGTCCAACAAGCACTTCTAGATTACTGTATGTCCTGCTATCCTCAGTTACAGGACAAATTTGGAAAGCTGTTAACTGTTATGCCTGAGATACATGCACTAGCAAGTAGAGGAGAAGAACACCTGTACGTAAAGCACTGTAGTGGAGGTGCTCCTACACAAACATTGCTAATGGAGATGCTTCATGCGAAACGAAAATAA
- Protein Sequence
- MKLLQHSWSDMLVLDHMHQRMHNSLPDETTLPNGQKFDLLSLGLLGVPSLAEHFTELTATLQDLKFDVSDYICVKFLLLLNPDVRGLMNRKHVQEGHEQVQQALLDYCMSCYPQLQDKFGKLLTVMPEIHALASRGEEHLYVKHCSGGAPTQTLLMEMLHAKRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00139780; iTF_01478857; iTF_00630564; iTF_01348109; iTF_00630647; iTF_00762617; iTF_01348061; iTF_00762591; iTF_00930378; iTF_01500457; iTF_00386475; iTF_00930446; iTF_00386398; iTF_00884286; iTF_00884095; iTF_01059917; iTF_01059918; iTF_00857683; iTF_01353780; iTF_00857722; iTF_01353818; iTF_01059995; iTF_01059996; iTF_01132275; iTF_01132237; iTF_00715195; iTF_01298472; iTF_01309486; iTF_00715154;
- 90% Identity
- iTF_00139780;
- 80% Identity
- iTF_00139780;