Aaln013015.1
Basic Information
- Insect
- Aphrophora alni
- Gene Symbol
- dmd-4
- Assembly
- GCA_963513935.1
- Location
- OY740765.1:144039715-144051050[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-25 1e-20 75.6 13.1 1 47 5 51 5 51 0.99 2 2 0.13 3.2e+03 0.4 1.9 28 35 393 400 392 402 0.86
Sequence Information
- Coding Sequence
- ATGGAAAAGACCCGTCGACCAAAGTGTGCCCGCTGCAGGAACCATGGTATGATCAGCTGGCTACGAGGACATAAACGTCATTGCAGGTTTAAAAGTTGTTACTGTGCAAAATGTAGCCTCATTGCTGAACGTCAGAGGGTCATGGCGGCACAGGTAGCACTGAAACGACAGCAAGCTGCTGAAGATTCAATAGCTCTTGGTCTGACTGCCGTAATGACTGGCAAGAAGTTCGGATTTCTACCACCAGGTCCGATTTTTGGAATGGCAGTTCCCGAGCCtgttgAAATATCAGATCGTTCGTCTTCTAGTAAATCACCAAACTCTACAACAGTTATCTCCGAAACAGAACCAACAACTAGCACAACCAGCGACATAAACGTTGCAACAACTACTACAAGCACATCTGATAATTCTCATTCAGATTCATCTGATAAAGATCCAGATGAAGATAAAATCAGAAAAGACAAAACGCATCTATCATCGAATACGTTCTCACAGTCATCGTTGGAACTTTTAGTTCGGTTGTTTCCGGCAAAGAAAAAATCTGTTCTAGAGTTGGTCTTGCGAAGATGTGGACACGATCTCCTCCAAGCTATAGAGTTATGCGCACCTCAGGACCTTAGCAATCCTGCCAATCTTGCTGTTAAGAATCACATCAATGAAGCAGCTTTGAGTTTCTTACATGCTACCAATGcgAGAAATGAAGAACCTGAAGATGACGAAGAAGGTGAAACAAGACCACACGAACCACCTCGCAGAGTATCCGTATCCTCGACCAATCAGAAATCAGCATTCAAACCCTTTATTTCCATAACGAGTCGGTTATCCAATGAGATTGCTAGTCCTCCAGAAGCTCACCAAAACAGTCAGCCGCAGATCAGATCTCGAATTATGGAAGGAGAACAGAAGCCGCTAACTCTTCACACGTCGCCCTACAGAACTGGTTTGGCGACACTGCCTCATTTCAACTGTAATAATCGATTTCTTTTCTCATCACCTCGAAGTTCAGCTATCGATTTCTTTCAACTACCGAACAACGTAGCTTCTCACAGCTTTGTAAATACTGCTGCTAGTACCTTCAGCACTTCTGTTCTACCTTGCCCACTCTACCAGACTGTTCCGCATTCTTCTCTTCAGTTGAACTCGGTACTGTTCCAACACCAACCATCAACTGTTGCTTGTACCTGTCCACAGTGTGCTACAGAAACATAA
- Protein Sequence
- MEKTRRPKCARCRNHGMISWLRGHKRHCRFKSCYCAKCSLIAERQRVMAAQVALKRQQAAEDSIALGLTAVMTGKKFGFLPPGPIFGMAVPEPVEISDRSSSSKSPNSTTVISETEPTTSTTSDINVATTTTSTSDNSHSDSSDKDPDEDKIRKDKTHLSSNTFSQSSLELLVRLFPAKKKSVLELVLRRCGHDLLQAIELCAPQDLSNPANLAVKNHINEAALSFLHATNARNEEPEDDEEGETRPHEPPRRVSVSSTNQKSAFKPFISITSRLSNEIASPPEAHQNSQPQIRSRIMEGEQKPLTLHTSPYRTGLATLPHFNCNNRFLFSSPRSSAIDFFQLPNNVASHSFVNTAASTFSTSVLPCPLYQTVPHSSLQLNSVLFQHQPSTVACTCPQCATET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -