Basic Information

Insect: Aphrophora alni
Gene Symbol: -
Assembly: GCA_963513935.1
Location: OY740767.1:142541572-142543377[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.8e-09 3.8e-07 32.0 0.0 2 43 12 53 11 55 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.8e-09	3.8e-07	32.0	0.0	2	43	12	53	11	55	0.94

Sequence Information

Coding Sequence: ATGGCAAAGAGGGGAAATTACGGAAAGTGGTCACAAGATGATTTACAAAGAGCGGTAGATGCTTACAGAAATGGCGATTTTGGATTAAACGAGTGTGGGAGAATTTACGGAGTGCCTAAAGGAACAATAAAAAGACACGCGGATGGAAAAAACTCTGTAGCAAATGAGATTAAGTTATTGGGAAGacaaccaacttttgatcatgaAATGCAAGAAGTTCTAAGAAACCATTTGTTAATGTTCGAACAGATGTTTTATGGATTTActactttagaatttagaaaGCTAGCTTTTGAAGTAGCAGAAAAATATGGGCTTCCTCATAgttttaacaaggaaaaaaagtgTGCTGGAAAGAAATGGTACTATAATTTTATGCGTAATAACCCTCAACTTAGCCTTCGTAGGCCAGAAGCTACATCACTGGCCCGAGTTAAAGGGTTCAATAAAGATAATGTCATgcacttttttgatatcttagaGAAAACTGTCAAGGACAACAACATAAATGCAAACACCATATTTAATGTTGATGAATCAGGATAttcaacagtgcaaaaacatatgCAAAAGGTAATAGCGAAGAAGGGCAAGAAACAAGTTGGGGGTGTAACAAGTGGTGAAAGAGGGATTAATACAACTATGGTATGTGCTGTTAGTGCTTCAGGTATCTATGTTCCacctatgattatttttaagaGGAAGATATGGTTGGAAGATCTGAGATTCGGTGCCCCCTTGGGAAGCATAGTAAAAATATCTGATTCTGGATACATTAACTCAGATCTTTTCTTTGAGTGGCTTAGGCACTTTCATAGTTTTGTCAGTTCTACAAAGACAAATAAAGTTCTTTTACTGTTAGATGGCCACACGACACATTGCAAAAACCTAGAAGCTCTAGAATACGCTAGAGAGAATGGAATCATCCTTTTACAGCTCCCTGGACACACATCACATAGGTTGCAGCCATTGGATGTTGCGTTTTTTGGACCTCTCCAAAAATACTTTGTTCAGGCCCAAGATGCTTTTTTAAGAGAGTACAAGGCAGATAAGGTAACTCAGctacaaatatcaaaacttttaaatgaagctTACGGAAAAGCTGCCACTGTAGGTAATGCTGCAAGTTCGTTTAGGGCAAGTGGATGTTGGCCTGTAAACAGGAACGTGTTTAGAGATTGTGATTTCGCTGGTGCAAGTGCTTTACAACCAGAAAACCAGATATTGCCCCCTTCTGAAGTTTCTGAACCACAAACACCAGAGCCAGGCACAAGTAAGACACACAACTATATccagaatatttccaaaaacacttCCTCGACAAGTTCTGAATTGGACGACACTGACGAAGATAGTGACTATGAACCTgcatctaaaaaagtttcatttagagAAACTCTGCTGAAAGTATCTCCATTACCAAAAAGAAACTTGTTTCAAGCAGTCTCGAGAGGACGTGGACAAGGCCGAGGTAGAGGATGTGGAGCTCAAAAGGCTGTTGTTATTACAAGCAGTCCTTATAAACTGgctttggaagagaaaaaaactatggcaaaggagaaagaagagagaaaaagGGAACGTATTGAGAAGAGAAGTGAAAAGTTAAATAAGAACACAGGAGTTGTGAAAAAAGTGGGaagaggaaatattaaaaaggaaaccAGTTGGTACTGCTATATTTGTGATGAAGCGTCTCATGAAGATATGATTCAGTGCATTAAGTGCCATACTTGGGTGCATACGATTTGCGCAGgtgttaaaaaaggaataaaacaatatttttgttcaagttgCCATGAGTAG
Protein Sequence: MAKRGNYGKWSQDDLQRAVDAYRNGDFGLNECGRIYGVPKGTIKRHADGKNSVANEIKLLGRQPTFDHEMQEVLRNHLLMFEQMFYGFTTLEFRKLAFEVAEKYGLPHSFNKEKKCAGKKWYYNFMRNNPQLSLRRPEATSLARVKGFNKDNVMHFFDILEKTVKDNNINANTIFNVDESGYSTVQKHMQKVIAKKGKKQVGGVTSGERGINTTMVCAVSASGIYVPPMIIFKRKIWLEDLRFGAPLGSIVKISDSGYINSDLFFEWLRHFHSFVSSTKTNKVLLLLDGHTTHCKNLEALEYARENGIILLQLPGHTSHRLQPLDVAFFGPLQKYFVQAQDAFLREYKADKVTQLQISKLLNEAYGKAATVGNAASSFRASGCWPVNRNVFRDCDFAGASALQPENQILPPSEVSEPQTPEPGTSKTHNYIQNISKNTSSTSSELDDTDEDSDYEPASKKVSFRETLLKVSPLPKRNLFQAVSRGRGQGRGRGCGAQKAVVITSSPYKLALEEKKTMAKEKEERKRERIEKRSEKLNKNTGVVKKVGRGNIKKETSWYCYICDEASHEDMIQCIKCHTWVHTICAGVKKGIKQYFCSSCHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00139232;
90% Identity: iTF_00139275;
80% Identity: iTF_00139277;