Basic Information

Insect: Aphodius sticticus
Gene Symbol: L
Assembly: GCA_963966075.1
Location: OZ014515.1:13689429-13694983[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.5e-06 0.00043 22.0 0.6 1 23 73 95 73 95 0.98

2 18 0.31 24 7.0 6.0 1 23 101 123 101 123 0.97

3 18 2.9e-05 0.0023 19.7 3.4 1 23 129 151 129 151 0.99

4 18 0.002 0.16 13.9 1.2 1 23 157 179 157 179 0.97

5 18 0.00078 0.06 15.2 0.1 2 23 205 227 204 227 0.95

6 18 0.0079 0.6 12.1 0.6 3 23 255 276 253 276 0.96

7 18 0.0034 0.26 13.2 0.2 1 23 302 325 302 325 0.95

8 18 0.043 3.3 9.8 0.0 2 23 414 435 414 435 0.96

9 18 0.018 1.4 10.9 5.1 3 20 445 462 444 466 0.89

10 18 0.087 6.7 8.8 0.2 1 23 471 494 471 494 0.92

11 18 7.1 5.5e+02 2.8 0.3 1 11 501 511 501 515 0.89

12 18 0.079 6.1 8.9 3.7 1 23 558 581 558 581 0.81

13 18 3.5 2.7e+02 3.8 0.2 2 23 625 647 624 647 0.89

14 18 0.00036 0.028 16.3 4.4 2 23 661 682 660 682 0.97

15 18 0.00016 0.012 17.4 0.7 1 23 691 713 691 713 0.98

16 18 0.013 0.98 11.4 0.1 2 23 855 876 854 876 0.95

17 18 0.035 2.7 10.0 0.1 1 23 884 906 884 906 0.95

18 18 0.0041 0.31 13.0 1.2 1 23 913 935 913 935 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.5e-06	0.00043	22.0	0.6	1	23	73	95	73	95	0.98
2	18	0.31	24	7.0	6.0	1	23	101	123	101	123	0.97
3	18	2.9e-05	0.0023	19.7	3.4	1	23	129	151	129	151	0.99
4	18	0.002	0.16	13.9	1.2	1	23	157	179	157	179	0.97
5	18	0.00078	0.06	15.2	0.1	2	23	205	227	204	227	0.95
6	18	0.0079	0.6	12.1	0.6	3	23	255	276	253	276	0.96
7	18	0.0034	0.26	13.2	0.2	1	23	302	325	302	325	0.95
8	18	0.043	3.3	9.8	0.0	2	23	414	435	414	435	0.96
9	18	0.018	1.4	10.9	5.1	3	20	445	462	444	466	0.89
10	18	0.087	6.7	8.8	0.2	1	23	471	494	471	494	0.92
11	18	7.1	5.5e+02	2.8	0.3	1	11	501	511	501	515	0.89
12	18	0.079	6.1	8.9	3.7	1	23	558	581	558	581	0.81
13	18	3.5	2.7e+02	3.8	0.2	2	23	625	647	624	647	0.89
14	18	0.00036	0.028	16.3	4.4	2	23	661	682	660	682	0.97
15	18	0.00016	0.012	17.4	0.7	1	23	691	713	691	713	0.98
16	18	0.013	0.98	11.4	0.1	2	23	855	876	854	876	0.95
17	18	0.035	2.7	10.0	0.1	1	23	884	906	884	906	0.95
18	18	0.0041	0.31	13.0	1.2	1	23	913	935	913	935	0.98

Sequence Information

Coding Sequence: ATGCTGTTTAAGGGCAACAGTTCGCGATTGGAAATGCTAATTGAGAAGCTGCAAGGCAATAGGGAAAACGCAAATTCGGACTTTTCCGCTCCAGGACAAGCGAGTTCGCCATCTAGCAGCAACCAATCCTCTCCGACCAGTTGCCAAAGTTTTGTTTTGAGTGATGCAACAGACGTTGACGAGGTGTACACTATGGGGGCAACTGCAACAACACCTTACGAGTGCAACATCTGCAAGAGGGCATTTTCCAGGTCGTCTGTGCTCAGCAAACACTTGCAGATCCACACGGATCAGCTCCAGTTTAGCTGTCCGTATTGTAGGCGTCTCTTCAAGCACAAGAGGTCCCGCGACCGGCACACCAAATTGCACACTGGCGACAAGAAGTACAAGTGCGTCCACTGCGATTCAGCGTTCGCGAGAAGCGATCATTTGAAAATCCACTTAAAAACTCACGACAATAAGAAGCCTCATCAATGTGAGCTATGCAACAGGGGCTACAATACTGCTGCTGCTTTGGCATCTCATCAACAGCATCATTCCAAAAAAGACCACAGGTGTGGGAGCAGCTCCAGCAGAGCAACAACTACAAGCACTCCTAGTCCTGGCCAAATCAAGTGTCCACAATGTAATGAAATATTCGCTAAAACGGAACAACTACAAACTCACATAGCAATAAAGCACAAACCTCCAACCCCTCAGAAGACACCAGAGACAAATTCGACAGTTCCCACAGCATCTGAAATGGAGCTACCAAAAATGGCATGCATGTACTGTGGAAAAGATTTTCCTAACATGAATTTGATGTACCACCACATTAACACAGATCACAGCGGAATTTTTATTCCCCAGAATTCGTCATATTCGAGCGCTAAAGATGCTTCACCGAAACTAAAAAACTCAACGTACCCTTGTGATTTGTGTACCATGAAGTTCGAAACTTCGCAAGCATTGAAGGATCATCTAGAGAACATCCATTGGAAGCTGCATGTGGACTATAATGCGACAACGTCTCAACAAGCAAAAGCGACTGATCTAAGTAGGAAAAGGAAAATTGATGAAGTTGATGATAAGCGAAATGATGGTACTAAACGAAATTCGCCATCAGCTGTGAGCAGTCCTTATGATGCTAATGATAAGCCATGCATATGTTCATATTGCTACGCCCAAATGCCTAATTTCAAAAGTTTTCTTGTCCACATGGAAAGCCACGTCTCTCTTAGCGCTTCAAACTTTGTTGGTTACTGCCCAATTTGCGGCGAACCTGGTAGAGATCCAATGGAGTTCAGTTCGCATATATTCAGCCATATAGTCAGCGATGTCACTGGTAGATGTTGCCATCAATGCAAGAAGTCTTTCGACCAGTTGGAACAGCTGCAAAAGCATAACTTTGAAGCACATTCCCAAAGTCTTTTCAAATGTACGATTTGCGGGGAGCTTTTTGAAAATGAAATCGCTATTCAGgtgcACTTCAATAATAAACACTGCAACGAATGTAAGCATTATCGATGTAACTTATGTCCCCAACAATTCTTCCATGATCGGTTGACGGCAGATTTGCACGTATCCATGAGGCATGGCACCCAGTTATCTGGTAATTTTAGGAATCAgcaagttttaaataaatttcctCCATCGTTCAACGAAATAGACTCCAGGAGGGTGTACCAAACGTACCAATGTCCTTTCTGTCAAAAATCTTTTAAGGATGAATACCTGCATCATCTTCACGTACTTAAGGAACATAACGAATCTCGAGAGGGCGAAAACTACTTGGTGGATGTCACAGCTTTGACGGCGGGTTCTCCAAACTTCTCATACAAGTCAATATCTCCTCAAGATGGCTTGAAAGGCGATTTGAAAATGATGTGTTTGAGTTGCGACGTTTGCAACAGGGCCGACTTCAGCAGCGAATCGGAACTCTTAGGCCACAAGAAATTGCACCAATCTCACGCGAAAACGAAGATGGGTTCTGTAAGTCTGCAATGCGCGTATTGTAACGAACATTGTAAGTCGCGGAGTGACCTAGAGAATCATATGAAGAGTCATCAAGTATCGTGCGGAAAAGGAAAGCATAAATGCAATATTTGCGATGAGATATTTTCCTCCTCCATCACTTTAGCTGACCACAAGCTTACCCATTGCAAAATTGTTTCTGGAAACACTTGCACCCAGTGCAAGGCGATCTTAGAAGACGAACAGTGCTTCTATACTCATCAGATGCAACATAACAACTCATCAGCCATCACTAAAAACAATTCGCAAATACCCCTTCCAGCGAACTGCGTCATCTGCTGCCAAACACTTCAGACTGATGTCGAAATGAGATTGCACGCGAAATTCCACCTGAGGCATTTACTCCAAAAGGAATTCCTTTGCGTCGTTTGCAATAAAATCTACGATAACCAATTATCAGATAAAAGTAATGGTGTGTCAATTTCAATTTGCAAAGACTGTAAGATGACCAATGGCGGCGGGTACCAACTCCAGAAAGAATTTAAGCACTACGGGTCTTTCGATAAAGATGAAGAAATGCAATTTAGAAATATGGAGGATTCGAGCTTGGTATGCAAGCTGTGCAGAAATGTCTTCCCGACGCAAGTGAAGCTGCAGGTCCATTTGATAGAGCACAACTTCATGGGAATGGGTCAATTCAGGTGTTACGTGTGTTCGTCTGTGTTTACTACGGCGAATGGACTTCAAGGACACATTGTTGGTCATGGTTTAAATCAGAGCCCTTATGAGTGTAACGAGTGCAAGATGAAATTCTTTTTCGAAACTGAACTGGAAAATCATAGAATATCGCACGCTATAGCGATGCAGAAAGTAGCTGAAATAAAAAGCGAGAAACAGTACAAGGCATGCGGCAATTGCTCAGGTGTTTACTTGGAGAGTTACTTTGCTGAGCATCTCGAGGCATGCTGTAAGGTAGAGATAAAAACTGAAGACAATAGTAACGATGACAGTGAGAGGAAAAACTGTTTCGAGACCAGTGGTATAGACGCGaaaattgaagaaatgcaataa
Protein Sequence: MLFKGNSSRLEMLIEKLQGNRENANSDFSAPGQASSPSSSNQSSPTSCQSFVLSDATDVDEVYTMGATATTPYECNICKRAFSRSSVLSKHLQIHTDQLQFSCPYCRRLFKHKRSRDRHTKLHTGDKKYKCVHCDSAFARSDHLKIHLKTHDNKKPHQCELCNRGYNTAAALASHQQHHSKKDHRCGSSSSRATTTSTPSPGQIKCPQCNEIFAKTEQLQTHIAIKHKPPTPQKTPETNSTVPTASEMELPKMACMYCGKDFPNMNLMYHHINTDHSGIFIPQNSSYSSAKDASPKLKNSTYPCDLCTMKFETSQALKDHLENIHWKLHVDYNATTSQQAKATDLSRKRKIDEVDDKRNDGTKRNSPSAVSSPYDANDKPCICSYCYAQMPNFKSFLVHMESHVSLSASNFVGYCPICGEPGRDPMEFSSHIFSHIVSDVTGRCCHQCKKSFDQLEQLQKHNFEAHSQSLFKCTICGELFENEIAIQVHFNNKHCNECKHYRCNLCPQQFFHDRLTADLHVSMRHGTQLSGNFRNQQVLNKFPPSFNEIDSRRVYQTYQCPFCQKSFKDEYLHHLHVLKEHNESREGENYLVDVTALTAGSPNFSYKSISPQDGLKGDLKMMCLSCDVCNRADFSSESELLGHKKLHQSHAKTKMGSVSLQCAYCNEHCKSRSDLENHMKSHQVSCGKGKHKCNICDEIFSSSITLADHKLTHCKIVSGNTCTQCKAILEDEQCFYTHQMQHNNSSAITKNNSQIPLPANCVICCQTLQTDVEMRLHAKFHLRHLLQKEFLCVVCNKIYDNQLSDKSNGVSISICKDCKMTNGGGYQLQKEFKHYGSFDKDEEMQFRNMEDSSLVCKLCRNVFPTQVKLQVHLIEHNFMGMGQFRCYVCSSVFTTANGLQGHIVGHGLNQSPYECNECKMKFFFETELENHRISHAIAMQKVAEIKSEKQYKACGNCSGVYLESYFAEHLEACCKVEIKTEDNSNDDSERKNCFETSGIDAKIEEMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00137273;
90% Identity: iTF_00137273;
80% Identity: -