Basic Information

Insect: Aphodius sticticus
Gene Symbol: -
Assembly: GCA_963966075.1
Location: OZ014509.1:67761795-67776675[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.5e-05 0.0027 19.5 1.2 1 23 135 157 135 157 0.97

2 15 0.016 1.2 11.1 5.9 1 23 163 185 163 185 0.96

3 15 0.00023 0.017 16.9 0.1 1 23 288 310 288 310 0.98

4 15 0.026 2 10.4 0.1 1 23 316 339 316 339 0.96

5 15 0.00031 0.024 16.5 3.4 1 23 363 385 363 385 0.97

6 15 0.0016 0.12 14.3 0.0 1 23 398 420 398 420 0.95

7 15 1.7 1.3e+02 4.7 0.2 1 23 426 449 426 449 0.95

8 15 0.028 2.2 10.3 6.2 1 23 456 478 456 478 0.94

9 15 8.6e-05 0.0066 18.2 4.4 1 23 484 506 484 506 0.97

10 15 0.013 0.99 11.4 0.3 3 23 513 533 512 533 0.97

11 15 9.2e-06 0.00071 21.3 0.5 1 23 541 563 541 563 0.98

12 15 0.0088 0.67 11.9 0.2 3 23 571 591 569 591 0.97

13 15 0.00028 0.021 16.6 0.3 1 23 597 619 597 620 0.95

14 15 0.081 6.2 8.9 1.5 1 23 634 656 634 656 0.96

15 15 0.0016 0.12 14.2 0.1 1 20 962 981 962 984 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.5e-05	0.0027	19.5	1.2	1	23	135	157	135	157	0.97
2	15	0.016	1.2	11.1	5.9	1	23	163	185	163	185	0.96
3	15	0.00023	0.017	16.9	0.1	1	23	288	310	288	310	0.98
4	15	0.026	2	10.4	0.1	1	23	316	339	316	339	0.96
5	15	0.00031	0.024	16.5	3.4	1	23	363	385	363	385	0.97
6	15	0.0016	0.12	14.3	0.0	1	23	398	420	398	420	0.95
7	15	1.7	1.3e+02	4.7	0.2	1	23	426	449	426	449	0.95
8	15	0.028	2.2	10.3	6.2	1	23	456	478	456	478	0.94
9	15	8.6e-05	0.0066	18.2	4.4	1	23	484	506	484	506	0.97
10	15	0.013	0.99	11.4	0.3	3	23	513	533	512	533	0.97
11	15	9.2e-06	0.00071	21.3	0.5	1	23	541	563	541	563	0.98
12	15	0.0088	0.67	11.9	0.2	3	23	571	591	569	591	0.97
13	15	0.00028	0.021	16.6	0.3	1	23	597	619	597	620	0.95
14	15	0.081	6.2	8.9	1.5	1	23	634	656	634	656	0.96
15	15	0.0016	0.12	14.2	0.1	1	20	962	981	962	984	0.93

Sequence Information

Coding Sequence: ATGGAGGAAGGTTTTGCGTTGGACTGGGGCGACTCGGTCGTCCAAGAGGAAGAAGTAATATGCGGCATCGAAAGCGAGGGCATGCTAGCCTCGGACGGGCCAGAGTTCACAGACGTTTGCGACGAGGTAATCGTCAATGAAACGGACCCGGGCGAGAATGTATCCGCGGAGAATGTTATGTACCTTACTGATAATAACATTCTCGTCATGCAGCAGAATAACGACACCCCTTTCATGGACTGCCAGGTATCCGAAGAAGTCGTAACAGACCAATGGAACGACGCCTGCCCCGAAGTCATAGTCGGCAACGAAGAAAACGTCGGCGACGGTGACAACATCCCCGGCGAGGACGTCACCATACCGCTGCCCTTGGACCAAGACCAGTACACGGCCGCCCGGCCGTACCCGTGCGACTTCTGCAGCCGCCGGTTCCGCAAGAAGGCCAACCTAATGAACCACATGGTCTCGCACCAAACGGACCGTCCCCACTGCTGCAACCTATGCGGCGTCCGCTACGTCCGAAAGTGCGACCTCATGAACCACCTAAAGATCCACGCCTACGTCCCCGAAACCGTAGACAACCTCGAAGAAGACACGCCCGACGAATCCGACTACGAGAAGCACAAACGTCAGAAGCCGTTCATCAAGAAACGCAAGAAACCGAAGATCAAAGAGGAATTCCCCGATTCCCCCGACGGGAAAGGCGCGTCGAGCTCGCGGAGTTACGATTACGTCGACGAGGATATGCGTTTGATGGAAACGATGGAATCGAACGTTAAATCCGATTACAACGCGTATCTCCCGCAGGAGAATCACCCGGTTTCCGAGCCGAGGTTTCCGATTACGGATCCGAGGAAGCCGTTTGTGTGTCAGCACTGCGGGGTGGGTTTTGCGAGGGAGAAGGCGTTGGCGTCGCACGCTAGGGTGCACGCTGGGGATAGTCCGTTTGAGTGTCAGAAGTGCGGGGAGATGTTTTGGGACGCGGCGTTGATGCGGGAGCACGTTAGGAATAAGCACGGGGATATGGAGGATGCGTTCGAGGATGATGATGATGAGTATTCGGAGGAGGAGGGGAAGTACGGGGAGTTCTTCTGCCAGACGTGCGGCGTGTCTTTCCATCGGCTGGAGTTGTTGCGGCGGCACCAGAAGATGCACGTGAAGGAGGAGTACGTGAACGAGGTGGAGTACGGGCACATCTGCAAGATTTGTGGGGAGTCGTTCACGGAGGCTCTGGATCTGCTGGCGCACGCCGAGGTGCACGCGCGAGGATCCGATTATAGATGCATGCTATGCGGTGAACTATGCGCCGACGAGCAATCCGTAGCCGTGCACGTCCAGTCGAAGCACGGCAAGAACCTCCCGCCGCACACGTGCATGCAATGCGGCCGTACCTGTAAAGATAAAAAGTCGCTATTCAAGCACTCTTTGGAACACAGCAAGGAGAAGGTCTTCAACTGCAACAAGTGCCCGAAGACGTTCCACAACAGGGCTCGACTCAAGCGGCACATGTTATCGCACAGGAACAAGGTAGTCGCGTGCGACGTCTGCGGCGAGGAATTCCCCGACGGCCGATCCCTCATGAACCACCGGCACAGTCACAGCAGCGTCTCCGGACGCCAATTCCCCTGCAAAGAATGCGGAAAAACCTTCGGATCGCGGAGCTCGCAACAAATCCACCTACGGATACACACGGGCGAACGCCCGTACGGCTGTCGGTTCTGCTGGAAGGCGTTCGCCGACGGAGGGACCTTACGCAAGCACGAACGGATCCACACCGGGGAGAAGCCCTACGCGTGCGCCGTGTGCCCCCGTGCGTTTAATCAAAGAGTCGTTTTACGCGAACATATTCGTTCGCACCATTCGGGGCCTGACCCGAATTATTCGCATTCCGTGACTCCGTATTGCTGTTCGGTCTGTTCGGATATGTTTGCGACATCGCAGGATCTGATCGTGCATTTGATTCATCATTGCGACTTGAATACGGCGATGCGGAGGCAGCCGCAGGTGGGGCCGAGGAAGTACAAGAGGAGGCGTAAGCTGAAGCCGCACGAGTTGGATATGATGTCGAATATGGATGATGACGATCGGGATGATGATTTCTCGGATACGGACGAGGAGGAGAGCGAGAGGCGCAAGAGGAAGAAGAAGGCGCCGCGGTCGCCGCCGAAGCAGCAGCCCGTGTCGTCGGGGTTTAGCGAGGTGGTTAATAGCTTCTCGTCGGCCATCGAGAATATCAGCTCGATCGTTAAGGGTACCGGGAAGAACAAGAAGAAGGTAAAGTCGGAACAGTCCGTTCCGTCGCGGCCCAAGATGATTCACACGCAGAAGACTAAAGTGGCGGTCGAAACGACCGAGGGCGGCAAGGTCCGCCACAAGACGAAAACCCTGATAACGCGGACGCAACCGACCGAGCTGAAGTCGGCTACGGGTGAACGGATTAGGCCGCGGACGAAGAACGTCAGTTACCACATCTTGAATCCGGACAAATACCCTCTCGCGACTTTCAGCGACGACGCAGCCCAGGCGGTCAACAACCTCCTCGCGAGTGAACCGCAACACCACGACCAAAACGGCATCATCGAGACGCCCGTTGAGGTTATGGCACCGCTCCCTACGATCGCCACTTCAACGCGACAGCTACGGAGACACAACAACAGCTTAGAACCGGGAAGGTTGATCATCGGACCCGGAACGAAGGTCGTAAGGATCGTAAAGAGCGGAATGATCGTTTCGAAGTCGAAAATCAGTCAGAAAGACGAAACGGAGCCGGAGCAGATCACGCCCGACGTCGAGGAGCCGATACATATTAAGCAGGAGGTGACGGAGGTGACGACGCCTCTGCACGAACTCGCCGAACTTTCGATGCAGCACGCGCAGAGCATATTCAAGTGCGAGATGTGCAGCGAGGTATTTACGGATAGGGCTCAGCTGCTCCTGCACGTGCCGATACATATTTGA
Protein Sequence: MEEGFALDWGDSVVQEEEVICGIESEGMLASDGPEFTDVCDEVIVNETDPGENVSAENVMYLTDNNILVMQQNNDTPFMDCQVSEEVVTDQWNDACPEVIVGNEENVGDGDNIPGEDVTIPLPLDQDQYTAARPYPCDFCSRRFRKKANLMNHMVSHQTDRPHCCNLCGVRYVRKCDLMNHLKIHAYVPETVDNLEEDTPDESDYEKHKRQKPFIKKRKKPKIKEEFPDSPDGKGASSSRSYDYVDEDMRLMETMESNVKSDYNAYLPQENHPVSEPRFPITDPRKPFVCQHCGVGFAREKALASHARVHAGDSPFECQKCGEMFWDAALMREHVRNKHGDMEDAFEDDDDEYSEEEGKYGEFFCQTCGVSFHRLELLRRHQKMHVKEEYVNEVEYGHICKICGESFTEALDLLAHAEVHARGSDYRCMLCGELCADEQSVAVHVQSKHGKNLPPHTCMQCGRTCKDKKSLFKHSLEHSKEKVFNCNKCPKTFHNRARLKRHMLSHRNKVVACDVCGEEFPDGRSLMNHRHSHSSVSGRQFPCKECGKTFGSRSSQQIHLRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPNYSHSVTPYCCSVCSDMFATSQDLIVHLIHHCDLNTAMRRQPQVGPRKYKRRRKLKPHELDMMSNMDDDDRDDDFSDTDEEESERRKRKKKAPRSPPKQQPVSSGFSEVVNSFSSAIENISSIVKGTGKNKKKVKSEQSVPSRPKMIHTQKTKVAVETTEGGKVRHKTKTLITRTQPTELKSATGERIRPRTKNVSYHILNPDKYPLATFSDDAAQAVNNLLASEPQHHDQNGIIETPVEVMAPLPTIATSTRQLRRHNNSLEPGRLIIGPGTKVVRIVKSGMIVSKSKISQKDETEPEQITPDVEEPIHIKQEVTEVTTPLHELAELSMQHAQSIFKCEMCSEVFTDRAQLLLHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00137250;
90% Identity: iTF_00137250;
80% Identity: -