Basic Information

Insect: Aphodius sticticus
Gene Symbol: -
Assembly: GCA_963966075.1
Location: OZ014509.1:7795573-7800876[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0019 0.14 14.1 1.9 1 23 149 171 149 171 0.98

2 11 1.4e-05 0.0011 20.7 0.5 2 23 200 221 200 221 0.98

3 11 0.0019 0.15 14.0 0.2 2 23 230 251 229 251 0.97

4 11 2.4e-07 1.9e-05 26.3 2.2 1 23 257 279 257 279 0.98

5 11 0.12 8.9 8.4 0.8 2 21 286 305 285 306 0.92

6 11 2 1.5e+02 4.5 0.1 2 23 320 342 319 342 0.92

7 11 4.9e-06 0.00037 22.2 0.1 1 23 347 369 347 369 0.96

8 11 0.0006 0.046 15.6 3.4 1 23 375 397 375 397 0.98

9 11 4.2e-06 0.00032 22.4 7.6 1 23 403 425 403 425 0.98

10 11 1.3e-07 9.8e-06 27.1 1.0 1 23 431 453 431 453 0.99

11 11 0.00028 0.021 16.7 1.1 1 23 459 481 459 481 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0019	0.14	14.1	1.9	1	23	149	171	149	171	0.98
2	11	1.4e-05	0.0011	20.7	0.5	2	23	200	221	200	221	0.98
3	11	0.0019	0.15	14.0	0.2	2	23	230	251	229	251	0.97
4	11	2.4e-07	1.9e-05	26.3	2.2	1	23	257	279	257	279	0.98
5	11	0.12	8.9	8.4	0.8	2	21	286	305	285	306	0.92
6	11	2	1.5e+02	4.5	0.1	2	23	320	342	319	342	0.92
7	11	4.9e-06	0.00037	22.2	0.1	1	23	347	369	347	369	0.96
8	11	0.0006	0.046	15.6	3.4	1	23	375	397	375	397	0.98
9	11	4.2e-06	0.00032	22.4	7.6	1	23	403	425	403	425	0.98
10	11	1.3e-07	9.8e-06	27.1	1.0	1	23	431	453	431	453	0.99
11	11	0.00028	0.021	16.7	1.1	1	23	459	481	459	481	0.96

Sequence Information

Coding Sequence: atgttggaAAACAATGCAACAGAAGCTCACAATCTCGGAAAAACTGAACTTTCATCTACGAGTTCTTGTAGAATTTGTCTGATTGAAACCGATTGCCAGAATATCTTCGAATTGAATTACGAGGGTCAAGATATCGTGGATATCTACAGTTTTTGCACTAATATAAAATTGGTCAAGGAACTGCACAATCCCGAACATGTTTGCTTGTCGTGCATTACCGAGCTAATTCAAGCATACGAGTTCATAACAAAATGTCAAACGTCCCATGAATTCCTACTATCGATACCCGAAGTTATAACAGAAAACGTGACGGAATATAATAATGACGTTGCAAAATCCGAGGAAGATATTTATATCCAAGTAATTGATAAAAATCCTTCGGAAACAGacaaaaataaaaccttgcagGAAGAAAAACACCAGACTGAAGTAAGAGAAGAGAATCATACATGTCTTATATGTTTAAAAGAGTACACGACATCGGCTGGCTTGAAAAATCATTCAAAGACGCATGAGAAAGAGATAACGAATAATCCCGAAGATATTGAGAAGAGAAAAATTTTAGATACCGAGGTAAAACAGCTGAAAAGTGGTCGTAAATGCCCTAAATGTTCAAAGGTGTTTTCGACTATAGCAGGTTTGAAGATTCATTATAGGTCGCATGCGAATGGGACAACGGATACGATAACATGCAAAATATGCGCGAAAACTTTAATCTCTCGGAAGAATATTGCAAGACACATGTTGATACAtactgaacaaaaaccttttcgtTGTGAGGAATGCGGCAGAGgtTTCAGACAGAAACACTCCCTACAAACGCACATGATGATCCATACGGGCGAACGACCGGTTGTCTGCGAATTCTGCGCTCAAACGTTCAAGCAAGTGAAAGACCTGAAGTACCACCACAGCAAAGGCGACTGCACACTCATCGAGAACAAGAACGACCCGACAACTTGCAATATCTGCTTAGCGCCAGCAAAATCATACCGAGCTCTTCGACAACATTACTCCTTAGCCCACAGCAAAAAAGAATACCTCTGCAACGAATGCGGAAAGGGCTTTATATCCGCCGCAGGATTAAAACAACACCTCCAAACTCACACCGGCGATAGACCTTACGTATGCCAAGTTTGCGATAAGAGATTTTTGCAGAAACATTCGTTAAAGTATCATATGTATATCCATACCGGCGAGAGGCCTCATCGGTGTGATATTTGCGGGAAATCGTTTGTTCAGCATCACCATTTGACGATACATATGCGTTTGCACAGTGGGTATAGGCCGTATAGTTGTCAGATTTGTTCAAAGTCGTTTACGATGAAGGGAAATTTGACGGTGCATATTAGGACTCATACTGGGGAAACCCCGTTTGTGTGCGATGTATGCGACGCGGGATTTCATGATTCGAGTTCGTTGAAAAAGCATAAGGTTAAGCATGATTTGGTAAGAGGTGTAGCAAAGGTTAAAAAGCCGGATAAAGTTATTGATTTGACTGTAGAATGA
Protein Sequence: MLENNATEAHNLGKTELSSTSSCRICLIETDCQNIFELNYEGQDIVDIYSFCTNIKLVKELHNPEHVCLSCITELIQAYEFITKCQTSHEFLLSIPEVITENVTEYNNDVAKSEEDIYIQVIDKNPSETDKNKTLQEEKHQTEVREENHTCLICLKEYTTSAGLKNHSKTHEKEITNNPEDIEKRKILDTEVKQLKSGRKCPKCSKVFSTIAGLKIHYRSHANGTTDTITCKICAKTLISRKNIARHMLIHTEQKPFRCEECGRGFRQKHSLQTHMMIHTGERPVVCEFCAQTFKQVKDLKYHHSKGDCTLIENKNDPTTCNICLAPAKSYRALRQHYSLAHSKKEYLCNECGKGFISAAGLKQHLQTHTGDRPYVCQVCDKRFLQKHSLKYHMYIHTGERPHRCDICGKSFVQHHHLTIHMRLHSGYRPYSCQICSKSFTMKGNLTVHIRTHTGETPFVCDVCDAGFHDSSSLKKHKVKHDLVRGVAKVKKPDKVIDLTVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00981462; iTF_00981958;
90% Identity: iTF_00981462; iTF_00981958;
80% Identity: -