Asti042993.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphodius sticticus
Gene Symbol
-
Assembly
GCA_963966075.1
Location
OZ014514.1:34979421-34986172[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 2.6e-05 0.002 19.9 0.6 1 23 107 129 107 129 0.99
2 27 0.026 2 10.4 0.5 1 23 135 158 135 158 0.96
3 27 0.0076 0.59 12.1 5.5 1 23 164 186 164 186 0.98
4 27 0.00015 0.012 17.5 0.4 1 23 381 403 381 403 0.99
5 27 0.61 47 6.1 1.4 1 23 409 432 409 432 0.96
6 27 0.0034 0.26 13.2 5.5 1 23 438 460 438 460 0.98
7 27 0.0017 0.13 14.2 0.4 1 23 574 596 574 596 0.98
8 27 0.61 47 6.1 1.4 1 23 602 625 602 625 0.96
9 27 0.0041 0.31 13.0 5.7 1 23 631 653 631 653 0.98
10 27 0.099 7.6 8.6 2.3 1 23 688 710 688 713 0.77
11 27 0.00015 0.012 17.5 0.4 2 23 717 738 716 738 0.97
12 27 0.00019 0.015 17.2 2.1 1 23 744 766 744 766 0.99
13 27 0.0095 0.73 11.8 0.4 1 23 770 792 770 792 0.97
14 27 0.00014 0.011 17.5 2.1 1 23 798 820 798 820 0.99
15 27 0.34 26 6.9 0.9 1 20 826 846 826 848 0.95
16 27 0.0011 0.085 14.8 1.8 1 23 852 874 852 874 0.99
17 27 0.0015 0.12 14.3 2.0 2 23 881 902 880 902 0.97
18 27 0.015 1.2 11.2 0.2 1 23 908 930 908 930 0.99
19 27 0.0022 0.17 13.8 1.9 1 23 936 958 936 958 0.98
20 27 0.0025 0.19 13.7 0.2 3 23 966 986 965 986 0.98
21 27 0.011 0.85 11.6 2.0 1 23 992 1014 992 1014 0.99
22 27 0.013 0.97 11.4 5.7 1 23 1315 1337 1315 1337 0.99
23 27 8.6e-05 0.0066 18.3 1.4 1 23 1343 1365 1343 1365 0.99
24 27 7.1e-06 0.00054 21.7 0.5 1 23 1371 1393 1371 1393 0.99
25 27 5.9 4.6e+02 3.0 2.7 1 23 1399 1421 1399 1421 0.86
26 27 3.9e-05 0.003 19.3 1.1 1 23 1427 1449 1427 1449 0.96
27 27 0.00016 0.012 17.4 0.7 1 23 1455 1477 1455 1477 0.99

Sequence Information

Coding Sequence
ATGCAGGAAACTGATGCCAATTCTGGATTAGATACTTCCCCAAGATTTGTTACTGAATTCGACAAAATGGAATGTGACGAAAGTGTCGATCATgcaaactgcgatagttcactACACGAACAACGCTCTGAAGACCCTGTGCAAATAGAACCACGAGAGGATCTATTGGAAATCATCGACGTTGACGACTCAATTGCACAAGATGATGAGCGGGAGAAATTAGGAGTGAAACCTTACAAATGTAGCATATCTAGCCCAGCTTGTGCCACAGGCGCTAGTATTACTGAGAACTTTAGAACGCAAACAGGAAAGAAGCAATTTCAGTGTGGCGAGTGTGATCATGTTAGTGCGCAACGTGGTGGTCTCACAcgccatatgagaacgcataccggTGAAAAACCATTCCAATGCCCCGTATGTGAATATTGCACTGCACCTGAAGGAAGTCTTCGAGACCATCTGACACGACGACATAAGATAAAGAATACACATAAATGCGTAGATTGTGACTTATGCTTTGCTAAATTCTCCAGTCTtttaaaacataagaaaatgcatgcaAAAGCGAAATTAGTTAAACGTACTGTTTGTGACTTTGACACCGTAACCTCGGAGCATCTTGAAATTCTGAACAAAACGCAGAAAATGGAATGTGTTGAAAGTACCGATCCTGCAAACTCCGATAGTTCACTACCCGAACAACGCTCTGAAGATCCTGTGGGAATAAGACCACCAGAGGATCTATTGGAAATCACCGATCTTGACGACACAACTGCACAAGATGATGAGCGGGAGAAATTAGGAGTGAAAccttacaaatgtaacatatcTAGCCCTGCTTGTGCAACAAGTGCTAGTAGTCCAAGATTTGTCACTGAATTCGACAAAATTGAATGTGACGAAAGTACCGATCCTgcaaactgcgatagttcactACACGAACAACGCTCTGAAGACCCTGTGGGAATGGGACCACCAGAGGATGTATTGGAAATCATCGACGTTGACGACACATTTGCACAAGATGATGGGCGGGAGAAATTAGGAATGAAAccttacaaatgtaacatatcTAGCCCTGCTTGTGCAACAAGTGCTAGTATtactgagcacttgagaacgcatacaggaaaGAAGCAATTTCAGTGTAGCGAGTGTGATCATGTTAGTGCAAATCGTGGTGCTCTTACAATACATATTAGAAAACATACAGGAGAGCGACCGTTCAAATGCTCCGTTTGTGAATATGCTTCTGCATACGTTGGATGTCTTCGACAACATCTGACACGACAACATCAGATAAAGAAGACACATAAATGCGTGGattgtgactatgcttgtgctaAATCCTCCACCCTTAGAAAACATAAGAAAACGCATACAAGAGCGAAATTAGTTAAACGCACTGCTTGTGACTTTGGCACCGTAACCTCGGAGCATCTTGAAATTTCGAACAAAATGCAGAAAATGGAATATGACGAAAGTACTGATCCTgcaaactgcgatagttcactACCCGAACAACGCTCTGAAGACCCTGTGGGAATAGAACCAGTTGCGGATCTATTGGAAATCATCGACCATGAAGACACAACTGCACAAGATGATGAGCAGAAGAAATTAGGAGTGGAAccttacaaatgtaacatatcTAGCCCTGCTTGTGCAACAAGAGCTAGTATTACTGCGCACTTGAGAACGCCTACAGGAATGAAGCTATTCCATTGTGGCGAGTGTGATTATGTTAGTGCAAAACGTGGTGCTCTTACAATACATATTAGAAAACATACAGGAGAGCGACCGTTCAAATGCTCCGTATGTGAATATGCTTCTGCATACGTTGGATGTCTTCGACAACATCTGACTCGACAACATCAGATAAAGAAGACACATAAATGCGTGGattgtgactatgcttgtgttAAATCCTCCACTCTTAGAAAACATAAGAAAACGCATACAAGAGCGAAATTAGCTAAACGCACTGTTTGTGACATTGCAACCGTGACCTCGCAGCATCTTCAAATTCCCAACAAAGCGCACATCAAACCGAAACCAATCCACATATGCCCAGTTTGCGAATATACTTGTActaaaaaatttattcttaagaaCCATATGATTAATCACATTAGAGTGAAAGTATCTCAATGCGGCCAGTGTGATTATTCTTCTTCAAACCGTGCTGATTTTATAAGGCATATGAGAATTCATTCACCTGTAAAACCATTTCAGTGTCTAGTTTGTGAGTATGCTTGTACTAACCGCTCTAGTCTTCAACTACATATCAAAACGCATATAGACGAGTTTAAATGCGACCTGTGTGAATATTCAACCACAACGCTGGAGCAACTTGTAGTTCACAAGGGAACTCATTACGAACAGGAACCATTTACATGCCAAGATTGTGACTATACTTGTACAGAGGCCTCGACTCTTGAAGAGCATACTAGAACGCATACAGAGAGGAACATATTTAAATGCAGTTATTGTAACTTGTATTCAACTTCAACCTTGAAGCACCTGGAAATACACATCGTAAAGTGTGTACCATATAGATGCAAGCTCTGTCCGTACGGTGCTACACGTTGTAGAGATCTTAAAGAACATATGAGAGTGCATACGGGAATAGAGCCGTTGAAATGTACATTTTGCAACTATACTACTAACTATCGTACTAATCTAGACCGGCATATTAGAGTGCATACCGGAGAAAAGCCGTTTAAATGTGATTTCTGCGACTATGCTCGTGGAGATAAAGCTGGTCTTCTAATGCATATGCTAACGCATAAAGGGGCGAAACCCTATAAATGTAAActatgtgattatgctggtgTATCCAGTCATAGCTTAAGACGGCATAAGGCAACGCATAAAGGAAAGAAGAATTTGTTATGCAACATATGTAACTATGCTACTGCACAGCGTGTTCAACTAGCCAGACATATGACATCACATACAGGACTGAGGCCATTTCAATGTTCCTTCTGCAGCTATGCAGGTGCTGTGAAATGTGACCTTACACGTCATATGCAAACACATCCAAAAGAAACAAGTTCTAAACAAACCATATTAagtaaactcataacgaacaTAGCTGGAGAAAGCAGACCAAGTGCAAGCTTCGTAACATCTGCGGAAGACCTTCAACTAACAACTCCGGTGGGGGAAGATTGCACTCCAGTGCAGAAtacattgaagaaatgcaaatttaTAGTGACGTCAATCATGAACAACCAAGATGATATGGATAATATAATTGAAGACCATCCTGCGAACCAGGTTGAGGAAGAAGTAAGTATGGATGAAATTAGACAAACGATGAACCAGAGTGATGGAGTGAGAGATGAATTTCCGAAAGACAAAGAAGTGGCAGAGAAGGGTACGGAAGTATCTCAAATCAGGAACGTTACTGAAGATTATATTTGTGACATACATGATACAAATGTAGTAGATAGTAGGTGCGATGTGATGGTAGATATAACCAAGGTGAAGGCAGAAGTAACTACAGATGAAATAACACCAACGATGAACCATAGTGATGGAGTGAGAGATGAATTACTGAAAGACAAAGAAGTGGCAGAGAAGGGTACGGAAGTATCTCAAATCAGGAACGTTACTGAAGATTATATTCGTGACATACATGATACAAATGTAGTAGATAGTAGGTGCGATGTGAAGGTAGATATAACCAAGGTGAAGGCAGAAGTAACTACAGATGAAATAACACCAACGATGAACCAGAGTGATGGAGTGAGATATGAATTACCGAAAAACTCAGAAATGGCAGAGAAGTGTAATCTTCAACAGCGTACGAAAACGCATGGGGAAGAGACGTTATTTAACTCTCATAGCGAACAGACACCATTTACATGCCAAGATTCTGGCACGATTCCGGCCTCGATGCAGCTTCAAATGCACACCACAACGCATGtccaatattttaaatgcaaattctGTGCGTATGCCAGTACACGTAGTGGTTGTCTTAAACACCATATGAGAGTGCATTCGGTAGAAAAACCGTTTAAATGTACAATTTGCGACTACGCTTCCCAATATCGTAGCAGTCTAACACAGCATATCAGAACGCATTCCGGTGAGAAACCTTTTAAATGTGATGTGTGTGACTATTCTGGTACACAAAAATCTAATCTAGAAATGCATATGCTAACGCATGCAGTGGAGAAGCTCTATAAATGTAAACTATGCGATTATGTTAGTTCATTCCGCAATACCCTTGTATGCCATGAGGTAACGCATACAGTAGCGCAGCAATTTTTATGCAACATATGTAACTATGCTACTGCACAGCGTAGTAAACTAACCAGACATATGAGAAGCCATACAGGACAGAAACCATATCAATGTTCCTTATGCAGCTATGCGGGTGCTGAGAAATCTTACCTTACACGTCATATGAGAACACATTCAAAAGAAAAACCATCTAAACAAACCATATTAAGCAAACTCATAACAAACATGGCTGGAGAAAGCAGCCCAAGTGCAAGCTTCGTAACATCTGCGGAAGACCTTCAACTAACAACTGCGGTGGAGGAAGATTGCACTCCAGTGCAGAAtacattgaagaaatgcaaattcaTAGTGACGTCAATCACGAATAAGCAAGATGATATGTATATAATTGTAGACCATCCTGCGAACCAGGTCGAGGGAGAAGGAAGTATGGATGAAACGAGACAAACGATGAACCAGAGTGATAGAGTGAGAGATGAATTACCGAAAAGCAAAGCAGTGGCAGAGAAGTGTAAGGAACTGTCTCCTCCAATCAGGAATGTAACTGAAGCTGATATTCGTGACATACATGCTATAAATGTAGTAGATAATAGGTGCGATGTGATGGTAGATATAACCAAGGTGAAGGCAGAACTAACTACAGATGAAATAGCACCAACGATGAACCAGAGCGATGGACTGATGTATGAAATCATAAAGGTTAACGAAGAGATACAGAAGTGGGAGCAAGAATTGATACTTGAGGTATGGCAAAAAATGGAAGCGCTTGCTGCAGTGGATGCTCTACAGAAGGAATTGGAGGAACGGGAGAAACTGTGGATGGAGGAGAAAGGGAAGCTTGAGGATCGCATACATGAAttagaaaatgaaaaaacaGATATAaggacattattattttaa
Protein Sequence
MQETDANSGLDTSPRFVTEFDKMECDESVDHANCDSSLHEQRSEDPVQIEPREDLLEIIDVDDSIAQDDEREKLGVKPYKCSISSPACATGASITENFRTQTGKKQFQCGECDHVSAQRGGLTRHMRTHTGEKPFQCPVCEYCTAPEGSLRDHLTRRHKIKNTHKCVDCDLCFAKFSSLLKHKKMHAKAKLVKRTVCDFDTVTSEHLEILNKTQKMECVESTDPANSDSSLPEQRSEDPVGIRPPEDLLEITDLDDTTAQDDEREKLGVKPYKCNISSPACATSASSPRFVTEFDKIECDESTDPANCDSSLHEQRSEDPVGMGPPEDVLEIIDVDDTFAQDDGREKLGMKPYKCNISSPACATSASITEHLRTHTGKKQFQCSECDHVSANRGALTIHIRKHTGERPFKCSVCEYASAYVGCLRQHLTRQHQIKKTHKCVDCDYACAKSSTLRKHKKTHTRAKLVKRTACDFGTVTSEHLEISNKMQKMEYDESTDPANCDSSLPEQRSEDPVGIEPVADLLEIIDHEDTTAQDDEQKKLGVEPYKCNISSPACATRASITAHLRTPTGMKLFHCGECDYVSAKRGALTIHIRKHTGERPFKCSVCEYASAYVGCLRQHLTRQHQIKKTHKCVDCDYACVKSSTLRKHKKTHTRAKLAKRTVCDIATVTSQHLQIPNKAHIKPKPIHICPVCEYTCTKKFILKNHMINHIRVKVSQCGQCDYSSSNRADFIRHMRIHSPVKPFQCLVCEYACTNRSSLQLHIKTHIDEFKCDLCEYSTTTLEQLVVHKGTHYEQEPFTCQDCDYTCTEASTLEEHTRTHTERNIFKCSYCNLYSTSTLKHLEIHIVKCVPYRCKLCPYGATRCRDLKEHMRVHTGIEPLKCTFCNYTTNYRTNLDRHIRVHTGEKPFKCDFCDYARGDKAGLLMHMLTHKGAKPYKCKLCDYAGVSSHSLRRHKATHKGKKNLLCNICNYATAQRVQLARHMTSHTGLRPFQCSFCSYAGAVKCDLTRHMQTHPKETSSKQTILSKLITNIAGESRPSASFVTSAEDLQLTTPVGEDCTPVQNTLKKCKFIVTSIMNNQDDMDNIIEDHPANQVEEEVSMDEIRQTMNQSDGVRDEFPKDKEVAEKGTEVSQIRNVTEDYICDIHDTNVVDSRCDVMVDITKVKAEVTTDEITPTMNHSDGVRDELLKDKEVAEKGTEVSQIRNVTEDYIRDIHDTNVVDSRCDVKVDITKVKAEVTTDEITPTMNQSDGVRYELPKNSEMAEKCNLQQRTKTHGEETLFNSHSEQTPFTCQDSGTIPASMQLQMHTTTHVQYFKCKFCAYASTRSGCLKHHMRVHSVEKPFKCTICDYASQYRSSLTQHIRTHSGEKPFKCDVCDYSGTQKSNLEMHMLTHAVEKLYKCKLCDYVSSFRNTLVCHEVTHTVAQQFLCNICNYATAQRSKLTRHMRSHTGQKPYQCSLCSYAGAEKSYLTRHMRTHSKEKPSKQTILSKLITNMAGESSPSASFVTSAEDLQLTTAVEEDCTPVQNTLKKCKFIVTSITNKQDDMYIIVDHPANQVEGEGSMDETRQTMNQSDRVRDELPKSKAVAEKCKELSPPIRNVTEADIRDIHAINVVDNRCDVMVDITKVKAELTTDEIAPTMNQSDGLMYEIIKVNEEIQKWEQELILEVWQKMEALAAVDALQKELEEREKLWMEEKGKLEDRIHELENEKTDIRTLLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00138318;
90% Identity
iTF_00138318;
80% Identity
iTF_00138318;