Asti039358.1
Basic Information
- Insect
- Aphodius sticticus
- Gene Symbol
- egg
- Assembly
- GCA_963966075.1
- Location
- OZ014514.1:4170271-4225120[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.39 4.9e+03 -1.3 0.0 31 43 1528 1540 1493 1544 0.77 2 3 5.2e-13 6.5e-09 36.7 0.0 5 71 1569 1628 1565 1633 0.89 3 3 1.7 2.1e+04 -3.4 0.2 13 27 1895 1909 1894 1915 0.79
Sequence Information
- Coding Sequence
- ATGTCTGAATCTATGGAAGTTGATTCAGATCCAATTCAGATCGCGAAAAAAAAGAAGACCGACAATACACCATGCGACATAGTGATATTAGATGACGACGATGCCGAGCTAGAGTGCGACTTCATAGATTTGGTCAAAACTGGTTTAACGGCGAATACGAAATGCATAAACTACGCGTGCAAGAGCGGCACGAACATGCTCGAACCACCCGGCTTCTGCTTGTCGTACTATCGCATAAAAAACAAGGTGAAAAAGCGGCAACAAGTTTGTTTGGAATGTTACGAGGAAGCTATAGAGCATTACGATGCATTAGCCGCAGCGGCAAAGAGCGATCGCCCCCTTATGGCAATGCAAGTTGCTTTTCGGAATGACGTTGTTGAAATTGATGATTCGGATTCGGATACTGAGGAAGAAAATGTTGCTGTGGACGTTTCTACTGTTAAATTATTCGAGACCGAGTTTGATAACACGGTTTCCGATGTTTTGCGGAAGTATAATTTCAATGATCAAGTCCGCGAGAGCTGTCAGATCTTGTCGAAAGAGACGGAAGCTATTGCAGATTCTTTTAAGGAGGTGAAAACTATGTTTGAAAGTATACGCTCGGAGTCAGATCAAATGATCTTTGAACTGTCGAATATCATGCGGTCCGATAATATGGAACTACCACCGTTAAATATCATGGACAGGAGGACCCCCGTTAGAAGACAACCATATAAACATACCGCATCTAAAGTTATACCACCAGCAAaaccaGTGGCGTTAAATTCACCGCAGTCTGGCTTGCTGAAGACTGCTTTGCAGAAACCTGGAATATCAAACGTTCCTATTATTGCGTCCCCCGCAAAGGGGGCCACGCCTCCAGTCATTAGGCCAATTGCAGCTGCTAATATGTCGGCCGCTAGTACGTCGGTTGCTTCGACACCAGTCGTTCCGATGCCTCGTGAAGCTAACCCAGACTCTATCGTAGGCCTGACTGGAGATATAGTGATAATTCCGGCAGATTTGCCACCTTTAGGGATAATTGAGAAACCGCCTTTGAAGATCGTTTGTGTTTACATTCCGGAGCGTGCTATGGAGACATGGCGTTTTGTTGAACGTTTTGATTTGGACGACCGTGAAGCTTCCACATTATGCGTTGATGGCTTGCAGCATTTGCAGTCGAGGGGGGTGGACGGCTTATGtagtgtattaaatattttccaTAACAACATCCGAAGTGTGCAAAAGAACTATGATGAGCTATTATTGTTGCTGTCGAGTAGTACAGTTGCATTTCAGGTTATTGTCCTGACGGAGACTTGGTGTATTCGTAATGTTGATAATTTAGGAATTGATGGCTATGACGCTTTTTATAGCGATGGAAAGTTTAACCAGAATGACGGGGTTATGATTTATGTAGATTCAAAGCTGACCTCAGATGTGaatcatatcaaaatacatGAAGTTACGTTTACATGCTTAAAGCTAAATATTGGCGGATTAATAGTTGTTGTAATCGCAGTGTATAGACCACCAGCCACGGACATTGTGTTGTTTCTGGACGATTTGGGCGCCACACTTGATAGTTTGGACCCTGCTGATGTGCATGTGTTTTTGGGggatattaatttaaatattataaattcagGTGACAATTCGGTGCAAGAGTATTTGAGTATATTAAGTGCACACggttttttgtcaaaaattaacACTCCAACACGAGTGTGCAACTCCTCGGAGACCTGTATTGACCACATATTTGTGAGACAGTCTAGAGCGAAAAATGTACAGAGTATCTCAGCTGTTGTGAGAACAGCTTTAACGGACCATTATAGCTCGGTCATCAGATTGTTCGGTGCGGATCCCATGGTAGGAGCTACGAAGAATGATTCCGGCTTAGTGCGAAGCATCTTGCAGTACTCTAAGTTGACCGAAGAGCTTCACGGCGAGAGCTGGCAACAAGTTTATGGTGCACAAAACGCAAGCACTGCCACTGAAGAATTTATTCTGAGATTAACGAGTGCAATAAGTAAGTGTAGTAAAACCAAAAGAACAGGTCAAAGAAGAAATAAAAGGAGAAAACCTTGGATGACAGAAGAACTAGTCAATCTCATTTGTGAGAGAGATACCTTAAAAATAACCGTCGCGATGAATCCTGATAATGAGGCGTACAGGACCGATTACCGGAGTTTTAGAAATCGGGTGACGAGTCAGATACGTAAGACAAGGCAGGATTATTACAGGGCTCAGCTTGATGATGCGGGAACAGATATGAGAAAGATTTGGCAGCTGATTGGTGATGTTACAAATGAGACCAGGTCATCCAACGCAGTGCGACAGATTCGAGATATCGATGGGCAAACTATTACAGATAAAGTAGAGATGTGTGAATTGTTTAATAACTACTATTGTAGTTTGGGACAGAATATGGCGGCCAGTATTGTCGGAGGGATGGTGAACAGCGATGCGTGTGGAGTAGATGCGAGACCTAACAGCCTCTACCTATGTCCAGTAAGCAAATCGGAACTTACCAATATAATATCTTCACTAAGGAATGGGAGTTCTACGGGACAAGATGGTATAAGCTCAATAACATTAAAAGTTGCTCACAACTATCTTCTTGATCCACTGGAACATATAATAAACAACTGTTTTGTCGAGGGAACTTTCCCGAGCATTTTTAAAACAGCCAAAGTGGTCCCAATATATAAAGGCGGACATTTCAGTATGGGTCTTCGGCGTGGTCTTTCAACTGTTGATGCCATGTATGCTCTTGTCCATAATATTTACGAAAGCCTGAATCGTGGGAGGAGGCCAGTggtgatttttattgatttggcAAGAGCTTTCGATACGGTTTCACATGATATACTGATGGAGAAAATGGAAGCGTATGGAATAAGAGGTACTGCGGCGGGCTGGTTTAGAGAATACTTGTCGAAGCGGTCTCAGTATGTTGTGATTGACAATCAGGCCAGCAGCAAACGGGAGATTAATTATGGGGTCCCACAGGGTTCTGTACTCGGCCCAGTGTTATTCCAACTGTATATAAATGATCTTCTCGAATTGGACATAGGTGGCAAAATATATTCATATGCGGATGACACGGCGCTGTTCTTTGATGACGTGGAGTGGACTTTGGTCAAGAAGAAAGCAGAGATCGGTTTGTGCAAAGTACGCAGTTGGCTAACTAAAAATCTGCTGACCCTCAACGCAAAAAAGACAACATTTTTGGCTTTCTCTTTGAATGCTGCAAGCGAGGCAAAATTTGATAAGGTGGTCCTTCATAAATGTGTATATGGGCTCGATTGCTCGTGCACAGAGTCAGTTGGTAGATCGAAGTCTGTCAGATACTTGGGTCTGTATATTGACCAATATTTACGGTGGGACGTCCATGTGCAGTCGGTTGCTGGAAGGGTGCGCAAGTTGCTACATAAGTTCTACCTTCTTAGAGATGTGCTCGGTCGTGCCTTGTTGTTGAGAGTGTATGGGGCTTTGGTTGAGTCAGTAATTACATATGGGATGGTCATTTGGGGGGGTGCGGCTGCAACTATTCTGGAGCCGGTTAATATTGTTCATCGTCACGTGTTGAGAATCTTGGATAGAAGACCGGCTCGCTTCTCGACTAGGGAACTATTCTTGTCTGTTGGGGTTCTGGATATCAGAAGTGATATGTACTACGCAAATCGATCGGAAATGATCGGCTCGTGGATCAAGGTGCAACTGACGGACGTAGTGCTGTCGGGAACGAAAAAAGACGGTCAGATTTTTACGCAAAGCCTCTTTGAGATTTCCATCGAGAATAAACAGAAGGCGGTGCAGAAAAAGTACGTCTCCGGAAAGGAAATTGCGTATTCTACCCTGCCGGGCGTACAGCTGGACGTCGGAACTCGAGTGATTGCGGTTTTTAGAGAAACTACACCAGCGGGagagattaaaaagaacaaaaaggatTCATACTATCCTGGAATTGTGGCGGAACCTTTACAGCCGGCGAATAAATATAGGTACCTAATATTTTTCGACGACGGTTACGCGCAATATGTATCTCATACTAATGTTCACCTCATCTACGAGGCGAACATGAATGTCTGGGAAGACGTAAACGTAAATTCTCGAGCGTTCGTCAAGAAATATCTGGAAAATTACGAGACCAGAGCCATGGTCCGTTTCCTAAAAGATCAAACAGTACGAACCGAGTACaacgggAAATGGTGGGTTACGACGGTTATAAACGTAGATTGTTCCCTGGTCCAAGTATTTTTTGACGATATCAGCAGAATAGAGTGGATCTACCGCGGTTCAACTCGCTTTAGTCCGATGTTCGAACAGGAGCAAGCTGCGGCGAACAGACAACAGAAACAGAGGTTTACAAGGAAGCCaaatATGTCTGGTCCGTACGTAGAATTCACGAGATCTGACGGATCAGCAACAAGTGGGGTTCCCGCCGGCGGCAACTTGGAGACTCAACAgcaacagcagcagcagcaacagCAGAGATCGGTGGCCAGAAAAAGTACTTCGAAACCGCAGGTCGTCAATAATAGTATCACGTCGAATATGAATCCGTTTTTGCCTGCGGACTTAGAAGCACCTGCTACTAAGATTGTGTATTATACCCCGCGCCGACAGAAGCCGAAGACGAACAATTACGAGACACATAACTGCGCCCCAAGTTGCAGGGATTATCTCTACTGCCAGCTAAACAGGATGAAAGGTTACAGTCCGTTGGCCAAACCACTTCTCTGCGGTTTCTACCGTTTGCTATACAAGGTGAAGCATAAGAAGATCGTTGTCTACAGAGCTCCGTGCGGAAGAACATTGAGGAACATGGCCGAGGTCCACAGATATCTGCGGCTTACGAAATCGGACCTTACGGTCGATCTGTTTGACTTTAACGTGTTTGTGAGGTGCCTCGCGGAATTCATGGTTGAGGCGAAGAGTATCATCTTGAAGGATCTCTCAGAGGGTAAGGAAGAATGTCCGATCACCGTCGTCAACTACGTCGACACCAAATCACTGGACTTCTGCAACTATTCAACAAGGAGGCAACCCATGGAAGGTGTCATGCTGAACCTAGAGTCCGATTTCCTCGTCGGATGCGATTGTACCGACGATTGCTCGGACCGAAGCAAATGTTCATGTTGGCAGCTAACACTCGAATCTCTCAAGTACATGGACAAAGATACAGACCCTGAATCAGTGGGATATCAATACCGTAGACTCCCCGAACCTATATTCTCCGGGATATTTGAGTGCAATCAGCGGTGTAAATGTGCCGCAACTTGTCTCAATCGTGTCGTTCAGAATCCGATGCAGCACAAGCTTCAGGTGTTCAAGACTGATTCCCGAGGATGGGGGATCCGCTGCCTCAACGATATTCCGCAGGGCTCCTTCATCTGTATATACGCCGGCAGCCTGTTAACCGAGGATATCGCAAATATGGACGGCAAATCGTACGGCGACGAATACCTAGCGGAATTGGACTTTATCGAAACCGCGGAACGCGCCAAGGAAGATTACGAGGACGACCCTTACCACGAGGAACTAGCGAAGGACGAAAAAACTCCCGAACCAAGCGAAGAGGAGGACGCCGCCGAAGAGGACGACAACGACCTGGATAGCACGCGGGATCGCCAGGAAGATTTCGATTTCGTCCCGAGCATGTTCATCCCGAAAGATACTCAGCAGAAGGAAGAGACAGGTTATCGATCGCGACTCAGGCAGAGGAAGAGCAGCGCTAAACAATTGCAAGAGAAAAAGGCAGACAAGGCTGAAAAGGCAGAGAAAGCGGAGAAAGCTGAAAAAGTGGAGAAGGCCAAGGCAAAGCCTCCGCCGCCTGTTGTCGAAGATGATGATACGGTTATGATTAGCGACGATGAAGATTATGTTCCCAGAGAACCCAGTAGTTTTATACCGAAAGATGAACCTGCCGATGAGGATCGGAGAAAGTACAGCTCAGTACGAGAGATGTTTGGATCAGAAGAAGACGTATACATCATGGACGCAAAGAGCACAGGAAATATTGGAAGATTTTTGAACCATTCATGTTCACCAAATATTTTCGTCCAGAACGTCTTTGTGGACACCCATGACCCCCGTTTTCCGTGGGTGGCGTTTTTCACGATGAGTTACGTAAGGGCGGGAACGGAGCTCACTTGGAACTACAATTACGACATCGGAAGTGTGCCAGATAAGGTTTTGTACTGTTACTGCGGTTCCAGTGAGTGCAAAGGTCGTCTTTTGTAA
- Protein Sequence
- MSESMEVDSDPIQIAKKKKTDNTPCDIVILDDDDAELECDFIDLVKTGLTANTKCINYACKSGTNMLEPPGFCLSYYRIKNKVKKRQQVCLECYEEAIEHYDALAAAAKSDRPLMAMQVAFRNDVVEIDDSDSDTEEENVAVDVSTVKLFETEFDNTVSDVLRKYNFNDQVRESCQILSKETEAIADSFKEVKTMFESIRSESDQMIFELSNIMRSDNMELPPLNIMDRRTPVRRQPYKHTASKVIPPAKPVALNSPQSGLLKTALQKPGISNVPIIASPAKGATPPVIRPIAAANMSAASTSVASTPVVPMPREANPDSIVGLTGDIVIIPADLPPLGIIEKPPLKIVCVYIPERAMETWRFVERFDLDDREASTLCVDGLQHLQSRGVDGLCSVLNIFHNNIRSVQKNYDELLLLLSSSTVAFQVIVLTETWCIRNVDNLGIDGYDAFYSDGKFNQNDGVMIYVDSKLTSDVNHIKIHEVTFTCLKLNIGGLIVVVIAVYRPPATDIVLFLDDLGATLDSLDPADVHVFLGDINLNIINSGDNSVQEYLSILSAHGFLSKINTPTRVCNSSETCIDHIFVRQSRAKNVQSISAVVRTALTDHYSSVIRLFGADPMVGATKNDSGLVRSILQYSKLTEELHGESWQQVYGAQNASTATEEFILRLTSAISKCSKTKRTGQRRNKRRKPWMTEELVNLICERDTLKITVAMNPDNEAYRTDYRSFRNRVTSQIRKTRQDYYRAQLDDAGTDMRKIWQLIGDVTNETRSSNAVRQIRDIDGQTITDKVEMCELFNNYYCSLGQNMAASIVGGMVNSDACGVDARPNSLYLCPVSKSELTNIISSLRNGSSTGQDGISSITLKVAHNYLLDPLEHIINNCFVEGTFPSIFKTAKVVPIYKGGHFSMGLRRGLSTVDAMYALVHNIYESLNRGRRPVVIFIDLARAFDTVSHDILMEKMEAYGIRGTAAGWFREYLSKRSQYVVIDNQASSKREINYGVPQGSVLGPVLFQLYINDLLELDIGGKIYSYADDTALFFDDVEWTLVKKKAEIGLCKVRSWLTKNLLTLNAKKTTFLAFSLNAASEAKFDKVVLHKCVYGLDCSCTESVGRSKSVRYLGLYIDQYLRWDVHVQSVAGRVRKLLHKFYLLRDVLGRALLLRVYGALVESVITYGMVIWGGAAATILEPVNIVHRHVLRILDRRPARFSTRELFLSVGVLDIRSDMYYANRSEMIGSWIKVQLTDVVLSGTKKDGQIFTQSLFEISIENKQKAVQKKYVSGKEIAYSTLPGVQLDVGTRVIAVFRETTPAGEIKKNKKDSYYPGIVAEPLQPANKYRYLIFFDDGYAQYVSHTNVHLIYEANMNVWEDVNVNSRAFVKKYLENYETRAMVRFLKDQTVRTEYNGKWWVTTVINVDCSLVQVFFDDISRIEWIYRGSTRFSPMFEQEQAAANRQQKQRFTRKPNMSGPYVEFTRSDGSATSGVPAGGNLETQQQQQQQQQQRSVARKSTSKPQVVNNSITSNMNPFLPADLEAPATKIVYYTPRRQKPKTNNYETHNCAPSCRDYLYCQLNRMKGYSPLAKPLLCGFYRLLYKVKHKKIVVYRAPCGRTLRNMAEVHRYLRLTKSDLTVDLFDFNVFVRCLAEFMVEAKSIILKDLSEGKEECPITVVNYVDTKSLDFCNYSTRRQPMEGVMLNLESDFLVGCDCTDDCSDRSKCSCWQLTLESLKYMDKDTDPESVGYQYRRLPEPIFSGIFECNQRCKCAATCLNRVVQNPMQHKLQVFKTDSRGWGIRCLNDIPQGSFICIYAGSLLTEDIANMDGKSYGDEYLAELDFIETAERAKEDYEDDPYHEELAKDEKTPEPSEEEDAAEEDDNDLDSTRDRQEDFDFVPSMFIPKDTQQKEETGYRSRLRQRKSSAKQLQEKKADKAEKAEKAEKAEKVEKAKAKPPPPVVEDDDTVMISDDEDYVPREPSSFIPKDEPADEDRRKYSSVREMFGSEEDVYIMDAKSTGNIGRFLNHSCSPNIFVQNVFVDTHDPRFPWVAFFTMSYVRAGTELTWNYNYDIGSVPDKVLYCYCGSSECKGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -