Asti001573.1
Basic Information
- Insect
- Aphodius sticticus
- Gene Symbol
- bab1
- Assembly
- GCA_963966075.1
- Location
- OZ014506.1:16632541-16636210[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-17 3e-14 53.9 0.0 1 43 28 71 28 73 0.95 2 2 3.5 3.7e+03 -0.8 0.8 6 15 155 164 153 170 0.87
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACGAATCAGAGTCTGGTGCATAATCTGAGATTCCGAGAAAGAGGACCGTTGAAATCCTGGAGGCCAGAGACCATGGCCGAGGCAATTTTCTCAGTGCTGAAGGAAGGCTTATCCTTGTCGCAAGCGGCGAGGAAATACGACATCCCGTACCCGACGTTTGTTCTCTACGCCAACCGCGTCCATAACATGCTCGGCCCGTCCGCGGATGGAGGTTCGGATCTCCGACCAAAAGGCAGAGGCCGCCCGCAGCGTATTCTTCTTGGCGTATGGCCGGATGAGCATATACGAGGTGTTATTAGGGCTGTAGTTTTCCGGGATTCCCATCAAATTAAGGACGAACATATATATCCACGTATGCATGATAACGTCAACATGCAGCAATACCAGAACAACAACTGCAGCAATGGACAAGATTCCAACGTATCCCCAGGTGCAGCAGCCGCCGCAGCAGTAGCTGCAGTAGCGCAAGGATTACGGCAGCAGATGTGCAGCATGGTTGCTGCTGCCCAACATCAAAGTTCAGCGCACGACACGAACCCAGTAGCAAGTTTAGTCAACTCGTTGGCATTAGCTGGACATTGTGGAGGAGTCTCCATGTCGAGTAATGGTGCCCCGCCGATAAGCATGAGCCACATGGCTTCGATGAGGATGGCCAGTCCAGCAAATAGCATACAAGATCTGCGAATAAGTCCTGCAGGATCAGGATTAGAAAGTCCAATATCTTCCCCGTTAGGTTTAACAGTTTCGAGTTCCATGGAGCCTGCCATTAGTATGGGAATCGGGAATAATCTGGATGTGTCCGCGATGGGTGTTCCCGGAATGGTTGGCTATAATAAGGCTCCGAGGAATTACGCTTCTCCAAGGCCTGAGAATTTATTCCATGAGGAGTTGGAGGAATTAGTTAAGCCTTTGCATGGTACCAATGGCGGTCGCCCAAAGGACCCAATATCGTCGATAAAGATGGAACCTATGACAGAGTGTCGTGGCGAATGA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHQIKDEHIYPRMHDNVNMQQYQNNNCSNGQDSNVSPGAAAAAAVAAVAQGLRQQMCSMVAAAQHQSSAHDTNPVASLVNSLALAGHCGGVSMSSNGAPPISMSHMASMRMASPANSIQDLRISPAGSGLESPISSPLGLTVSSSMEPAISMGIGNNLDVSAMGVPGMVGYNKAPRNYASPRPENLFHEELEELVKPLHGTNGGRPKDPISSIKMEPMTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121512;
- 90% Identity
- iTF_00980860;
- 80% Identity
- -