Asti013415.1
Basic Information
- Insect
- Aphodius sticticus
- Gene Symbol
- retn
- Assembly
- GCA_963966075.1
- Location
- OZ014507.1:48349462-48360041[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-20 8.2e-17 62.8 0.0 17 89 14 84 8 84 0.93 2 2 2.1 1.1e+04 -1.8 0.0 47 61 207 219 178 236 0.59
Sequence Information
- Coding Sequence
- ATGCGTGCGTGTCCTACGCGAAGAAAAATTGCGGCGTTTAGTACACCAATAAATCGCCTCCCCATCATGGCCAAACACGTTCTTGACTTGTTCCAACTTTACAATTTGGTAGTGGAGCGTGGGGGTTTGGTAGAAGTTATCAATAAGAAGTTATGGCAGGAGATAATCAAGGGGTTGAATCTACCCTCATCGATAACATCGGCTGCCTTTACTCTGCGGACACAATATATGAAATACCTGTACAACTACGAAACGGAGAAAAAGAAGTTCAGCACGTTCTCCGAGCTTCAAGTCGCCATTGACGGCAACCGGCGTGAAGGAAGACGAGCGACATACTATGATCACAGAGCCACCTCATCGAATCCGCCCACACCTCAGCAACAGTTGACAAACGCCAGATTAAGCCAGTTGGCCAATTCAGCGATGAGTCTCCACAATGGCCACGGTATACAAGCACCCCCAATCCCAAATCCACAAATGAACGGTACGGCGGTTCTCCAAGCCGCTATTGGAAACGAATTGCAACAGTCGATCAACATGATGGACTATTTCAAGATGTTCCAAAACGTATCAATGCCCACCAGCGTTGCCGCTGCAATGCCAACACCTGGTGGCTTGAACGTTGCCGCTACCTTGTGGAACTCGGTATACAATAACAATCCCAATCAACATCAGCCGCCGCAGATTCATCATCAAATCCCCGAGCAAAGGGAGCCGATTAATTTGGCTAATCCTGAGACGAATAATGATTCGTTTGCTGAGGCGACGCCAAACTCTTCAAGGAGGAAACGTAGTCGGAGGTCGCCGTATGACCGTTCTGATAATAGTAATGATTCCGCGACTGCAGCTCGCAGAAGACGATCGCCGAGTGTCAGCCCGCCTCCAGCACAGCGACCTGCACCATTCGCAACCAGTATAAGGATCGAGACGCGAGGTGACGCTCGTAATGGTGAGGGTTCCCTAGTTGTTACCATGGAGGTAGGCGGTCAGACATACCAAGGAGTTTTATTTTCACAGCAAAATGAATCTAGCGAATCAAGAAACTCGATGCCGTAA
- Protein Sequence
- MRACPTRRKIAAFSTPINRLPIMAKHVLDLFQLYNLVVERGGLVEVINKKLWQEIIKGLNLPSSITSAAFTLRTQYMKYLYNYETEKKKFSTFSELQVAIDGNRREGRRATYYDHRATSSNPPTPQQQLTNARLSQLANSAMSLHNGHGIQAPPIPNPQMNGTAVLQAAIGNELQQSINMMDYFKMFQNVSMPTSVAAAMPTPGGLNVAATLWNSVYNNNPNQHQPPQIHHQIPEQREPINLANPETNNDSFAEATPNSSRRKRSRRSPYDRSDNSNDSATAARRRRSPSVSPPPAQRPAPFATSIRIETRGDARNGEGSLVVTMEVGGQTYQGVLFSQQNESSESRNSMP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980720; iTF_00136613;
- 90% Identity
- iTF_00980720; iTF_00136613;
- 80% Identity
- -