Agra011245.1
Basic Information
- Insect
- Aphodius granarius
- Gene Symbol
- grn_1
- Assembly
- GCA_963971325.1
- Location
- OZ020223.1:6679125-6706320[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-19 6.1e-16 58.5 4.7 1 35 202 235 202 236 0.98 2 2 5.2e-19 2.1e-15 56.8 7.5 1 35 259 292 259 293 0.97
Sequence Information
- Coding Sequence
- ATGGAAAGCTATTTGATACACGGGGGCGATGTGCTAGTTTGGCCCGAAACATACGATAGTTCATCGAGGATATCATCAAGTCAGGTGTGTAGGCCTCACTTCCACGCACCTCTACCATGGTTATCCGACGGTACGAAACCGATGACGCATTCAGGTCCGTGGGTTCCCTTTGGGGGAACAGACCCGGACAAGTCACAGTCTCCATCATCAGCGCCTGCCCAACCCCACAACCTGTTTTCTTTCCCTCCGACGCCTCCAAAGGATAGCACCCCTGACTCCGTTGCACCAACTGGTGGAGCTGAGTACAGCGCTGTAGCCGCAGCGATGGGGGCCTTCATGCACGAAAACCCCCAGAGTTGTGCTCTTGACGTGAAGCCATCGTCGATATCCTCGAACAACAAGCAACGCGAAGGTAGTGAATATGATGGAGGCTCATCCGGCATGTTTAATGGTAACTTTGAAAGTTCGTATGGGGCCGCGTATGGCCACGGTATTCCCGGGACCGCGTATTCTCCGCAAACTAAACACCATTTAGCTGGGCAGGGTGCCCAGTCACCAAACAAACCACGAAACAAGTCTAGAACCAGCGCGGAAGGGCGAGAATGCGTGAATTGCGGTGCGACGAGTACGCCACTGTGGCGTCGCGACGGCACTGGACACTACCTATGCAACGCCTGCGGCTTATATTACAAGATGAACGGACAGAATAGGCCACTCATCAAACCCAAACGAAGACTGAGCCTCCAGAGCGCTGCCAGGCGGGCTGGCACGAGTTGCGCCAACTGCAAGACAACAACGACAACACTATGGAGACGCAACCAAAACGGGGAACCTGTGTGCAATGCCTGTGGACTCTACTACAAACTACACAATGTAAACAGACCATTGACGATGAAAAAAGAAGGCATCCAAACGAGAAATAGGAAACTATCATCAAAGAGCAAAAAGAAGAAAAGCGGTGGTTGCCTATCCCTTGGGGGCATGATGACGGATATGATGAAGCCCCTCGACAGTAGTAAAGGTGCCTTCGGCGGCGGAGGTTTTGGATCCATGGGTGGTGGCGGTCATCCCCATCTCAATCCAGCGTTGCATCCCCACCATGCGATGAGTCATTGGTACCAGCACGGTGGTCATCCTCAGGGTTTCGTTTCTGGACCGCCACCACCAGCACCACCTCCAACAGCATCCTACCACCACCATATGAGCAGTTTAAGTGCAGCAGGACTTGGTTTAGCATCAAATGGAATGacTGGTTGGAGATCAGAATACACGTGA
- Protein Sequence
- MESYLIHGGDVLVWPETYDSSSRISSSQVCRPHFHAPLPWLSDGTKPMTHSGPWVPFGGTDPDKSQSPSSAPAQPHNLFSFPPTPPKDSTPDSVAPTGGAEYSAVAAAMGAFMHENPQSCALDVKPSSISSNNKQREGSEYDGGSSGMFNGNFESSYGAAYGHGIPGTAYSPQTKHHLAGQGAQSPNKPRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKSGGCLSLGGMMTDMMKPLDSSKGAFGGGGFGSMGGGGHPHLNPALHPHHAMSHWYQHGGHPQGFVSGPPPPAPPPTASYHHHMSSLSAAGLGLASNGMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00830831;
- 90% Identity
- iTF_00111241;
- 80% Identity
- -