Agra012920.1
Basic Information
- Insect
- Aphodius granarius
- Gene Symbol
- dmd-4
- Assembly
- GCA_963971325.1
- Location
- OZ020223.1:27186816-27191650[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-25 7.6e-21 74.6 11.3 1 47 8 54 8 54 0.98 2 2 0.041 4.4e+02 1.7 1.1 29 35 235 241 233 245 0.85
Sequence Information
- Coding Sequence
- ATGTTGCAAAGTCGTTCAGCAAGAGTACCTAAGTGTGCAAGATGCAGAAATCATGGAATGATATCAACATTGCGAGGGCATAAGAAACAATGTATTTACAAGAATTGCAACTGTACAAAGTGTGGATTAATCAAGGAAAGGCAAAGAATAATGGCTGCACAGgtAGCACTGAAAAGACAGCAAGCAGCAGAAGACGCCATAGCACTCCACTTAGCAGCCGCAGAAAGCGGGACCACGTACGAATACCTCCCTCCAGGAAAAATCTACGGGATGCAAGTCACATCGCCCACCCCAGAAACGCCAAAGGCAAAACCAGAATCACCAGACGTTCCATCAAGTTCTTCAGCAACCACAACCAGCGAAGTCCAAGTTAGCCCCGCTTCCATCGACATGCTCTGTAAGCTATTTCCAAACAAGAAACGATCAGTTTTGGAACTAGTTTTAAAACGATGCAACCACGATTTACTAAAAGCAATCGAACACTTCAATTTATCAAATTCGAGACGAAACAGCGAAGAGAAAACTGATCCTGACGATCACGTAAGCGCTTTTAAGCCAGTTTTTGGTAAAGTTGGTACTTCGCATGGTGGTCAGTTACCTTTGATAGCCGGGAGCAAGGTTTATATGCATAGTATTTATCCCTTTTTGTCGCTTTTCAATCCGCAACCTGTTTTGCCTAGTCCCGTTTACTTGCCAGGTTTTTGTGATTGCAACCAATGTCAATATAACGTCCATCCAAGTTCCCGTCCGTAA
- Protein Sequence
- MLQSRSARVPKCARCRNHGMISTLRGHKKQCIYKNCNCTKCGLIKERQRIMAAQVALKRQQAAEDAIALHLAAAESGTTYEYLPPGKIYGMQVTSPTPETPKAKPESPDVPSSSSATTTSEVQVSPASIDMLCKLFPNKKRSVLELVLKRCNHDLLKAIEHFNLSNSRRNSEEKTDPDDHVSAFKPVFGKVGTSHGGQLPLIAGSKVYMHSIYPFLSLFNPQPVLPSPVYLPGFCDCNQCQYNVHPSSRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00137966;
- 90% Identity
- iTF_00137966;
- 80% Identity
- -