Agra020656.1
Basic Information
- Insect
- Aphodius granarius
- Gene Symbol
- Bgb
- Assembly
- GCA_963971325.1
- Location
- OZ020225.1:23677799-23685138[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-56 4.7e-52 176.8 2.4 1 163 30 189 30 193 0.92
Sequence Information
- Coding Sequence
- ATGCATCCTATGAATTTCCACCATCCACTGGACATATCCATCTACAATGTACCATTCGAACAACCACGTCCAAAACAACTTATTCGCTTGCCAAGGGTTGTTGAAAATCAGAAGGCTAAGTTTGAGGAGAATGATATGTTCAAGAAATTAAGCAGGGAAAGTGAGGTTCGTTACACAGCGTTGAAAGAGCAAAAAGATCCATCTGTGAGGCAGCAACTCTTCCTGGAACATTGTCGTTCTGGTTACATAGAGGTCGCCTGCGTTGTCAACGGAATCCACCTTCCATTATCCTTCACACCATCGGTCCATGGCAACACCAGGACGGAAGATTGTGATTACGTCAAAGAACCCGGAAAAGTTCATATCAAATCTTCCTTCATCATGAACGGTGTCTGTGTTCGATGGACAGGATGGCTTGACCTCAAACGTCAAGACGGTGTTGGAATCCTCGAATTCGACGAAGAGAGGGCAGCGCAAGAGGACATAATCTACAAGCAACAGATGGAAAGGTACAAAGCCATGATGCAGGCCCGACAACAACAGCAAAGACAAGACGAACAGCAAGAGAATATCCAACACAACAACACAAACGTCATGTACAGGGTGGAAATGGCACCTGTGGCAATACTGCAATCTTCCCACGATAAAGATCTTGGATACTTTAGAGACTCGCCTGCGCTAAGTGCCTCTAGAGCGGTCAAGATTCTTATAAATCAAGTGCTTATGCAACGGACAACACTCCCCCAAAATACTCCAGGTAGAGAGAATCTTTTACAGACCGTCAAAAACACAGTTCCGGTCGGTAATTTTCCAGTTACACGCATCATCAAACTTTAA
- Protein Sequence
- MHPMNFHHPLDISIYNVPFEQPRPKQLIRLPRVVENQKAKFEENDMFKKLSRESEVRYTALKEQKDPSVRQQLFLEHCRSGYIEVACVVNGIHLPLSFTPSVHGNTRTEDCDYVKEPGKVHIKSSFIMNGVCVRWTGWLDLKRQDGVGILEFDEERAAQEDIIYKQQMERYKAMMQARQQQQRQDEQQENIQHNNTNVMYRVEMAPVAILQSSHDKDLGYFRDSPALSASRAVKILINQVLMQRTTLPQNTPGRENLLQTVKNTVPVGNFPVTRIIKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -