Aaph000759.1
Basic Information
- Insect
- Aphidoletes aphidimyza
- Gene Symbol
- Hr39
- Assembly
- GCA_030463065.1
- Location
- CM059996.1:8990589-8993528[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.36 3.5e+03 -2.8 6.8 67 162 45 142 18 152 0.57 2 5 2 2e+04 -5.4 7.9 56 111 133 188 59 242 0.47 3 5 2 2e+04 -7.0 13.9 51 159 246 349 227 363 0.47 4 5 3.5e-08 0.00034 20.3 0.1 1 20 491 510 491 514 0.94 5 5 3.1e-76 3e-72 244.4 0.5 164 408 545 808 523 808 0.88
Sequence Information
- Coding Sequence
- ATGTCTGCATCTGGTGGTGGTTGTTCGAATGTAAGCGGTGATTTAAGTATTCGCCCGAATATATCGGTCACAAGTATCAATTGCCCCACATCGAATGTCAACAGTATTGATTTAAGCAATGGTGCCAATGAATTAACGACGAACACTAGTAATCTAACAAATAATACAGATGCAAATAATGTGACCAACAAGTCGAATAGTTTTTGTAATAGTTTAGTAAGTGATGCATCATTGTCAacgcagcagcagcagcagcagcagcaacagttGAACAATAATCCGCATTTCTATGGAAACGGTAGCATTCGAATAGCCGTGCCAAAAATGGAGGAATCCGATGAATCTGAGACTGAATTATCACAAATTGAATGCGctgcatcaacaacaaccgGAACACCAACGGCAGTTAGTATGCGAGCgtcaaacaacaataaaaacacaccaaGGCCAATGTCATGGGAAGGTGAATTGTCAGAGAATGACGATCAAATGGAAACGGACGCAAATCCAACCAAATCCACAGTGACAAATAACAATGCGATAAcggaaaatgccatttcatatgcaacaaatggaaatgcaGAAAAATCCATCATTAAGCCACGCACAGCGGAGCTAAATGACaacacagcaaaaacaaacgatttggATGGAAAAATCAAAGTTAAACCGGAATACAATAGTTTTCCGCCAAATAATACGGCCGATGCCAATCATTCGATTGCATTGGAAGCAAACAAACGGTTTCCATTTGACATGTCAAATatgaaattcgaaacaaatatGCAAACACAGCATCCGACcaatcaatttgttcaatcaaCACCACAGAATGATGTCAATTCAACGTCGATGATGCGAACAAAAGCGAATAATATTTTGCCAACAAATCCGAGCCCAGATTCAGCTATTCATTCGGTGTACACACACAGTTCGCCGAGCCAATCACCATTAACATCCAGACACACTCCATACACACCGTCGTTGAGCCGAAATAACAGTGATGCATCGTATAGCAGCTGTTATTCGTACAGCTCTGAATTTAGTCCGACTCATTCGCCGATTCAGGGGCGACATAATATGTACGCGGGCGGCAATTTCAATGGTTCACCGTTGCATCACTCAGTATTGTACAAACCAATGATCGACGGAAATGACAATGCCAAGACACTACAGCATCAACAGTCAAATGAGGAAACGGTTCTCGAACCGGAAATCATTCCGTCAGCCGGCATCTCCAGGCAACAGCTGATCAACAGTCCATGTCCGATTTGTGGTGATAAAATATCTGGATTTCATTATGGCATTTTTTCATGCGAATCATGCAAAGGATTTTTCAAGCGAACCgttcaaaatcgaaagaattATGTTTGTTTGCGTGGCGGACCATGTCCCATATCGATTGCAACGCGAAAAAAATGCCCGGCTTGTCGATTCGAAAAGTGTTTACAACGCGGCATGAAATTGGAGGCAATTCGTGAAGACCGTACCCGCGGCGGTCGATCAACATATCAGTGCTCTTATACATTGCCCATGCTCAGCCCATCACTGGTTGATGGCACTTTGTTGATATCAAACAATCGAACGAAGGCATCTAATCAGCCAGATGGTATGGCTGGTATGAATAATGCACCAAATCAACAAACCATACCCGCATTACTACAGGAAATCATGGATGTTGAACACTTGTGGAAGTTCAGTGAAGCTGAAATTAATAAGCTCAATCAAAACCAAGTGATGAATAATGAGAGCAACAGAAATGATGGTGCTGGAACATCATCGGCCACATTGGCCGCAAATCCATTACTGGCCGGACTCACGAATAGCGAAGACACAAGCCCCGATCTAATTGCTAATCTGTGCAATGTGGCTGATCATCGGCTctataaaattgtaaaatggtGCAAAAGTTTGccattgtttaaaaatatatcGATTGATGACCAAATTTGCCTACTGATCAATTCCTGGTGCGAACTATTGCTATTCTCGTGTTGCTTCCGATCGATTTCGTCTCCAGGCGAAATTCGTATCTCTCAAGGCAAATCGATCAATTTGGAACGGGCGAAATCAAATGGACTTCAGGCCTGCATTGAACGAATGCTGAATCTTACGGATCATTTGAGACGACTTCGTGTTGATAAGTACGAATATGTTGCAATGAAAGTTATTGTTCTTCTTCAATCAGACACGTCTGATTTAAGAGACCCAGAACAAGTTCGTGGTTGCCAAGAGAAAGCATTGCATGCCCTTCAGACGTATACATTGGCTCATTATCCCGATGCACCATCAAAGTTTGGTGAATTACTTTTGCGAATACCAGAATTGCAACGGACCTGCCAGattgGCAAAGAAATGCTtacaattaaatcaaaagatGGTGCCGAATTCAATTTGTTACTTGAATTGTTACGAGGCGAACATTGA
- Protein Sequence
- MSASGGGCSNVSGDLSIRPNISVTSINCPTSNVNSIDLSNGANELTTNTSNLTNNTDANNVTNKSNSFCNSLVSDASLSTQQQQQQQQQLNNNPHFYGNGSIRIAVPKMEESDESETELSQIECAASTTTGTPTAVSMRASNNNKNTPRPMSWEGELSENDDQMETDANPTKSTVTNNNAITENAISYATNGNAEKSIIKPRTAELNDNTAKTNDLDGKIKVKPEYNSFPPNNTADANHSIALEANKRFPFDMSNMKFETNMQTQHPTNQFVQSTPQNDVNSTSMMRTKANNILPTNPSPDSAIHSVYTHSSPSQSPLTSRHTPYTPSLSRNNSDASYSSCYSYSSEFSPTHSPIQGRHNMYAGGNFNGSPLHHSVLYKPMIDGNDNAKTLQHQQSNEETVLEPEIIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGGPCPISIATRKKCPACRFEKCLQRGMKLEAIREDRTRGGRSTYQCSYTLPMLSPSLVDGTLLISNNRTKASNQPDGMAGMNNAPNQQTIPALLQEIMDVEHLWKFSEAEINKLNQNQVMNNESNRNDGAGTSSATLAANPLLAGLTNSEDTSPDLIANLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSISSPGEIRISQGKSINLERAKSNGLQACIERMLNLTDHLRRLRVDKYEYVAMKVIVLLQSDTSDLRDPEQVRGCQEKALHALQTYTLAHYPDAPSKFGELLLRIPELQRTCQIGKEMLTIKSKDGAEFNLLLELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288172;
- 90% Identity
- iTF_00133336; iTF_00133279;
- 80% Identity
- iTF_00133336; iTF_00133279;