Aaph001806.1
Basic Information
- Insect
- Aphidoletes aphidimyza
- Gene Symbol
- SMARCC2
- Assembly
- GCA_030463065.1
- Location
- CM059996.1:22324103-22328542[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-14 2.3e-11 43.7 0.2 3 44 672 713 670 715 0.95 2 2 9.8 9.2e+03 -3.0 0.0 5 18 955 968 953 969 0.84
Sequence Information
- Coding Sequence
- ATGGCTCTATTAGGACCAAAAAAGGATGGTGGTCCGAATGTGGAGTTTTTCCAATCGCCGGAGATTATGCAAGGATTTGAGCAAGTGAAACAATGGCTGcagaaaaattgtaaaaaataTGTTCAATCAGATCCACCGTCAAAGGAGTCACTGTCACAATTGCTGATTTCGTTTATACAATTTCAAGAGACACGATTTGGTAAAACTGCAATTGAACCACCGACAATACGCTTACCGATGCGATGTTTCTTAGATTTCAAACCGGGCGGCAGTTTGTGTCACATCTTCTCGAATATGTATCGCTATAAGGCCGATCAGCGTTGGcgaaaattcgaatttaataCAAAGGCACCACGCAAAGACAAAGAtccaaacattcaaatggcaattgaaattgaaacgactTTAATCGAACAAGAGTGCTTACGTTTGCCAGTTGCATACATTCGACCCGAAGTCGATGAAGAACTTCGTGAACAAATCACAGACATTCTGAAAAGTCATCAGGGTGAAATCACCGAAGACGAAGAGGAAGCCACGCACATCATTTACCCAGAAATCGATCCATTGCCAGATGATTATGCACGGCCATCGTTTAAACGAGGCAAAAATGTCATGATGCATTGGTATTATTTGCCTGAATCGTATGACTCTTGGGTTCCAAATACATTCGAATTGCCggATGATATTCCGGAAAATATTGCCCCAAGTCAAGATGTATGGCGAGTTTCAGCTACATGGGTGTTGCATTCGCAAGAATACAATGAATGGATGTCTGAAGAAGATTATGAAGTCGATGAAAATGGCAAGAAAAAGGTTCATCGTCATCGATTATCGGTCGAAGATTTGATGCAAGATGAAAAACGCACTGGCAAAGCAACCGGCAAAGCAAAGAGAAAACGATCACCATCGCCCGCACCAAAAGGTGTTGGAAAACGTAAGTCTGGCCGTTCGCCAGCTGTTGTGCAGAAGAAAGCACGCGGTAATGCCGATATAGAGGATGAGGAAGATTTAACTCGTGACATGGACGATCCACCAGCCGAACCGAACATCACCGAAGTGATTGCAAAGCCATCAACAAATAGTCCGGCTACACAATCAAACAGCAAGCAACGTAGCACTGCCGATAATGAAATGATGCCGTTGAAAGGTGGTATTGTTGCTGATTTAGATGAGGAGACCGAGAAGAGTGGCGGTTCAGGTACTCAAAATAATGTCGGAGCAGCCGGTGGCGAGGACTCACAAACTGggaaaacaagtgaaaatagTAACACACAAGAATTTCCAAGCAACCGTGATGATCTCGAAGACAATGTTACCGAACAGACACATCACATCATTGTGCCATCGTATTCGGCTTGGTTTGACTACAATTCGATTCATGTCATCGAAAAGCGTGCTATGCCCGAATTTTTCAAtggtaaaaataaatcaaaaacaccAGAGATTTATATGGCCTACAGAAATTTCATGATTGACACATACCGTTTGAATCCAACTGAATACTTGACGAGCACCGCTTGTCGCCGCAATTTGGCCGGTGATGTGTGTGCTATAATGCGAGTGCATGCATTCTTGGAACAATGGGGCCTAATCAACtatcaaattgatattgatgcTCGTCCAACACCAATGGGACCACCACCAACGTCACATTTCCATGTACTTAGTGACACACCGTCCGGTTTGCAACCATTGAATCCACCAAAAACGACTCAGCCATCTGCGGCAAAGACACTGTTTGACCtcgataaaattaaaaaagaaaaagaaggaGTTGCTCCTGAAGGACCGATTGCTCCAGCTGCGGCAACGGTTGCAACACCAGCAAATGTGAACAGCATAACAACACCACCGAATACTGGAATTTTGACACCAGGCGCACAGGCAGCACAAGGACCGATTAAATTAGAAAACTCAATTGAACCGGGTGCACATTTCGGCTTGAGAATGGATCAATATGCAAAAAAACCGATTGCTATGCGAAACAAAACCGCCGCAAGCATGGCACGTGAATGGACTGAACAAGAGACGCTACTGTTGCTTGAGGGCTTGGAAATCTATCGTGACGATTGGAATAAAATTTGTGAACACGTCGGTACACGTACTCAAgatgaatgcattttacacTTTTTGCGATTGCCAATCGAAGATCCATACCTCGAAGATGATTGCGGTTTCTTGGGCCCACTCGCCTATCAACCGATCCCATTCAGCAAATCCGGTAATCCGATTATGTCAACCGTTGCATTTTTGGCATCGATTGTTGATCCACGAATTGCCGCTGCCGCTGCCAAAGCAGCCATGGAAGAATTTGCATTGATTAAGGAGGAGGTTCCACCCAATGTCTATTATGCTCActacaaaaatgttgaaaaatcaatggTCAACGGTAAATTTGATCCAACCGCCGGATTAGCAAGCAGTGGAATTGCTGGAACTGCACCGGACAAAGAAGACGATGATAACAAAAACACTGACGAAGAAATGAAAGATGTTTCAAAGAAAGACGCCGATAAAGTGAAAGAAGGTGAAAAAGATAAAGATAAAGATAGTAAAGACACTGATAAggacaaagaaaatgaaaaagtggCGGACAAAGCAAAAGAGCCGGAAAAACCGGCCAGCGATGAGAATAAACCGAATGATTCTTCTTCTACTAACGTTCCAACAGCAGGTCAAAATGAATCCAACAAAATGGACACATCGGAAAAATCCAACGAGAATGCCACCGAAAATGGAACCGCAGTGAATGGAAACGACAAAGATTCCGAGGAAAATCGCAAATTATTCAACGAAGCCGATTTACAGAGAGCCGCTGCAGCTGCACTTGCATCAGCTGCTGTCAAAGCTAAACACATGTCAGCACTCGAAGAGCGAAAGATTAAGAGTTTGGTAGCGTTACTTGTGGAAACTCAAATGAAGAAACTTGAAATTAAACTACGTCACTTTGAAGAGCTCGAAACAACAAtggaacgagagagagaaggtCTTGAATATCAACGTCAACAATTGATTACAGAGCGACAACAATTCCATTTGGAGCAATTGAAGGCAGCTGAATTCCGTGCACGACAGAATGCACAACATCGACTACAGCAAGAGCAACAGGGTCAATGGCAGCCACCGTCAAATGCAAGTCTACCCAACACACCTCCGGTCACACAAACACCGCATCCATTGCATCCGAATGTAAATGGACCACATATTCCACCTTCGACTGCCGGCCCAACTGTTGGACCAAGCGTTGGCCCAACCGCTGCTCCAAATGTAGTCACACCTATTCCACCGCAACAGGCTACTGCTAGTGCTGCTCCTGCACCAAATGTGACACAACCGAGTGAAGTACCTGTTTCACAAGCACCACCAACAGCGACAGCAGTTCCAACACCAGTGATACCGCCACAAAATGTCGCTCCTGCGTCAACAGAACCGCCAGTTACACCTGCAACAGAAACACCACCAGCCGTTGCTAATCCACCTCCGGCCGCTGTTTGA
- Protein Sequence
- MALLGPKKDGGPNVEFFQSPEIMQGFEQVKQWLQKNCKKYVQSDPPSKESLSQLLISFIQFQETRFGKTAIEPPTIRLPMRCFLDFKPGGSLCHIFSNMYRYKADQRWRKFEFNTKAPRKDKDPNIQMAIEIETTLIEQECLRLPVAYIRPEVDEELREQITDILKSHQGEITEDEEEATHIIYPEIDPLPDDYARPSFKRGKNVMMHWYYLPESYDSWVPNTFELPDDIPENIAPSQDVWRVSATWVLHSQEYNEWMSEEDYEVDENGKKKVHRHRLSVEDLMQDEKRTGKATGKAKRKRSPSPAPKGVGKRKSGRSPAVVQKKARGNADIEDEEDLTRDMDDPPAEPNITEVIAKPSTNSPATQSNSKQRSTADNEMMPLKGGIVADLDEETEKSGGSGTQNNVGAAGGEDSQTGKTSENSNTQEFPSNRDDLEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNGKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDIDARPTPMGPPPTSHFHVLSDTPSGLQPLNPPKTTQPSAAKTLFDLDKIKKEKEGVAPEGPIAPAAATVATPANVNSITTPPNTGILTPGAQAAQGPIKLENSIEPGAHFGLRMDQYAKKPIAMRNKTAASMAREWTEQETLLLLEGLEIYRDDWNKICEHVGTRTQDECILHFLRLPIEDPYLEDDCGFLGPLAYQPIPFSKSGNPIMSTVAFLASIVDPRIAAAAAKAAMEEFALIKEEVPPNVYYAHYKNVEKSMVNGKFDPTAGLASSGIAGTAPDKEDDDNKNTDEEMKDVSKKDADKVKEGEKDKDKDSKDTDKDKENEKVADKAKEPEKPASDENKPNDSSSTNVPTAGQNESNKMDTSEKSNENATENGTAVNGNDKDSEENRKLFNEADLQRAAAAALASAAVKAKHMSALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQNAQHRLQQEQQGQWQPPSNASLPNTPPVTQTPHPLHPNVNGPHIPPSTAGPTVGPSVGPTAAPNVVTPIPPQQATASAAPAPNVTQPSEVPVSQAPPTATAVPTPVIPPQNVAPASTEPPVTPATETPPAVANPPPAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01350630;
- 90% Identity
- -
- 80% Identity
- -