Basic Information

Gene Symbol
Snapc4
Assembly
GCA_030463065.1
Location
CM059999.1:42649328-42660330[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 3.6 3.4e+03 -1.6 0.0 23 46 1395 1420 1379 1420 0.80
2 5 7.5e-12 7.1e-09 35.8 0.0 1 45 1426 1471 1426 1472 0.96
3 5 6.1e-09 5.7e-06 26.5 0.0 3 43 1482 1526 1480 1529 0.96
4 5 4e-09 3.8e-06 27.1 0.0 2 46 1536 1581 1535 1581 0.92
5 5 6e-14 5.6e-11 42.5 1.0 1 45 1587 1632 1587 1633 0.95

Sequence Information

Coding Sequence
ATGGAAACTGTTGGCTTCATCAACGAACCATTAACTCAGACTGGATATGGTCTGTCTGACGATAATCAGTCAACTGATTCACATTTGGGAAGCTCAGTGAATGAGGAAAAGACCAACTCAatcgatgacgatgacgatgacaatgtgaatgtaaaatcGGAAATGGAAGCAAATGAATTGGAATACGTGATAGAAATAGATGGCTCGAGTGACGAAGAAGACATGATCGACGATCCATTCAGaatattgaatccaaaagACGTCACACACGGAATTGGTACTAGATCATCTCTGCGACTAATGGCAAGAGCAAACGATGAATCAAATGCTCAGAAGCCATCATGTTCAAAGAATGCAAAGCGATTCAATTGCAAGCTTTGTGAATATGGAAGTGATCACAAAGGGAGTCTCAGTGTGCATATGCGAACGCACAACAAAGAGAAACCTTTTCGATGCAGCCGATGTTCTAAACGCTTTACAAATTCGTCACATCTCAAATCACATATGAGGACGCATAATAAACCACATCGATGCAGTCATTGTTCGAAAAGATTCAACCAATTGCAGCTTCTCAAAACACATATGACAACTCACAAAGACAGAAGACTCCTGTTTCATTGTAAAGGATGTTTTCAAAGATTTGCAAAGGAAAGTGAAAAGAAAGCACATGAAAAAGGCTGTCGATATCGTCGTTACGAATGTGATATTTGCAAGAATTTTGTCACTCGTTATAAATCTCATATGGAAACACACATGCGAGTTCACACGGGTGAAACCCCGTTTCGCTGCAAGGTTTGCATGAAATGCTTCAATCAAAAAGGCAATCTTAAGAAACACATGAAGAACGTTCACAACAGACGCAACTTATTGTCAACCAGTTACACCaaagttcaaattgaaaccaaagGAGGTCAAACGGAAACTGGTGACTTTATCAACGAACCTTCGGCTCAGGCTGGATATGGAATTTCAGTGAAAGAGGAAAATATCAACTTAATCGATgacaatgtgaatgtgaaatgggAAGAGATTGAAACTCGAGTGGACTCAGTGGTAGAAAAACTCAACTCGGGCTACGAAGAAGACATCGATGAATCGCAGAACTATCACTTagaaaccaaaattgaatgggAGGAAACTGATTGGACGAACGATGCGTTTGGCAACGAAGTGAGTCACAACAACGACGAAGGGAACATTGATGACGACTACGTCTCTTTGAATGATGGATACAGTACAGGTAATGACGTCACAAATGGGAATCGTGATGGATCATCTTCACGACGGAAGAAAAAGAAGGAGAAGCCATCATGTCTAAAGCCATCAAAGGATTCGAAACGATTCAAATTTCCGAAGGAAAGTGAGAAGAAAGATCATGAAAAAGACTGTCGATATCGTCGTTACGAATGTGACATCTGCAAGAAATATGTCACTAATAATAAAACTCAAATGGAAATACACATGCGAAGTCATACGGGTGAAAAACCGTTTCGCTGCGAGTCCTTCAATAGATTGTCGACCAGTTACACCAAAGTCCAAACTGAAATTAACAGAAGTCAAATGGAAACTGTTGGCTTCATCAACGAACCATTAACTCAGACTGGATATGGTCTGTCTGACGATAATCAGTCAACTGATTCACATTTGGGAAGCTCAGTGAATGAGGAAAAGACCAACTCAATCGATGACGATGAAGATGataatgtgaatgtgaaattggaggagaatgcaaatgaattggaaTACGTGATAGAAATAGACGGCTCGAGTGACGAAGAAGACATGATCGATGATCCATTCAGaatattgaatccaaaagACGTCTCTTCGAATGGTGGATGTAGAACAGATGGTGATGTCTCACACGGAATTGGTACTAGATCATCTCTGCGACTAATGGCAAGAGCAAACGATGAATCAAATGCTCAGAAGCCATCATGTTCAAAGAATGCAAAGCGATTCAATTGCAAGCTTTGTGAATATGGAAGTGATCACAAAGGGAGTCTCAGTGTGCATATGCGAACGCACAACAAAGAGAAACCTTTTCGATGCAGCCGATGTTCTAAACGCTTTACAAATTCGTCACATCTCAAATCACATATGAGGATGCATAATAAACCACATCGATGCAGTCATTGTTCGAAAAGATTCAACCAATTGCAGCTTCTCAAAACACATATGACAACTCACAAAGACAGAAGACTCCTGTTTCATTGTAAAGGATGTTTTCAAAGATTTGCAAAGGAAAGTGAAAAGAAAGCACATGAAAAAGGCTGTCGATATCGTCGTTACGAATGTGATATTTGCAAGAAATTTGTCACTCGTTATAAATCTCATATGGAAACACACATGCGAGTTCACACGGGTGAAACCCCGTTTCGCTGCAAGGTTTGCATGAAATGCTTCAATCAAAAAGGCAATCTTAAGAAACACATGAAGAACGTTCACAACAGACGCAACTTATTGTCAACCAGTTACACCaaagttcaaattgaaaccaaagGAGGTCAAACGGAAACTGGTGACTTTATCAACGAACCTTCGGCTCAGGCTGGATATGGTCTGCCTGACGATGATCAGTCAACTAGTTCATTTTTAGGAATTTCAGTGAAAGAGGAAAATATCAACTTAATCGATgacaatgtgaatgtgaaatgggAAGAGATTGAAACTCGAGTGGACTCAGTGGTAGAAAAACTCAACTCGGGCTACGAAGAAGACATCGATGAATCGCAGAACTATCACTTagaaaccaaaattgaatgggAGGAAACTGATTGGACGAACGATGCGTTTGGCAACGAAGTGAGTCACAACAACGACGAAGGGAACATTGATGACGACTACGTCTCTTTGAATGATGGATACAGTACAGGTAATGACGTCACAAATGGGAATCGTGATGGATCATCTTCACGACGGAAGAAAAAGAAGGAGAAGCCATCATGTCAAAAGCCATCAAAGGATTCGAAACGATTCAAGTGTATGCATTGTGAATATGGAACTAATGAGAAAGGAAATCTCAATCAACATATTCGAACGCACACAAATGAGAAACCTTATCGATGCAGCTGTTGTGATAAATGCTTTGTACATTCGTCGAGCCTCAAAAGACATATGGCGAAAAATAAGTACGAATTTCCATTCCATTGCTCGAAATGTTTCCGCAGATTCAttcgaaagaatgaaaaagagtCACATGAACAGAGGTGCGGAAATCATagcaataaatatgaatgctATGTTTGTAAGTATTTCACCAGCATTAAGCCACATTTGGTTAGACACATGCGTACGCACAGCGGTAATAAGCCATATCGATGCAGTCAATGCTCCAAAGTATTCACCCAATCGCTGAATCTCAAAATGCACATGACAACTCACAAAGACAAAAATCTCCCGTTTCATTGTAAAGGCTGTTTTCGCAGATTTCCGAAGGAAAGTGAAAAGAAAGATCATGAAAAAGACTGTCGATATCGTCGCTTCGAATGTGACATCTGCAAGAAATATGTCACTAATAATAAAACTCAAATGGAAATACACATGCGAAGTCATACGGGTGAAAAACCGTTTCGCTGCGAGAATGATAGTGAATATGACGAATGGGTGGTTGACGATATTAATTATGTGCAAGAAGCTCAACAAATGGTTTGCAATTACAGTCAAATATCCATCGAAAATGCACTCATTCTAAATAAACAGATGCGATCCTatttaaacgatttaaaaCATGAACTCGAACGAATGCTAAGCGTATGCCAAgagaaatacaaacaaaatgatgtgCGGCTGGCTGACATGAGCAAAATCAAACCAACACCAAAAATCTACACCACATATTATTTCTGTGGTTATCCATTTTTTAAAGATCGAATGGGCGGTGCACCACCAAAATCGGCCGAATATTTACGACGTTCGGAAACCGATGGTGAATTATTTCCATTGGATTTAGAAAAGCGTGCTTTATGGTTGCCACGTGATAAAGTTGAATTGGTACAAGGTGTTAAAAAGCAAACCATTGCGTATTTACAATCAATGCATCGAAATCGAATTCGACAAGCAGCCGGCAAACGGTGTGCTAGTGAACTGACGGCTCGAATTCAAAATGAAAGTGATGCATTGGAAAATATGCATTTGAGTGAGCTGTTTAAGAAAACTGAAGGAAGTGATTTCCGTATCAATtggttcaatgtttcaatggatGCTCTGCAAGATCGTCATTCAGCCAACGAATGCATGGCGATGTGGAATGCTTATTTAATGCCAACACTAAATCGAAAATCATGGACACCGGCTGAAGAGGATAAATTATTAAATGCTGCTATCAAATATGATGCACAAAATTGGCCAGAAATTGCTAAAGCCGTGGAAAATCGTTCGGTTTATCAATGTTTGGTGCACTATCAAACccaatttaatgtgaaaagtGTGCAAAAAAATGTACGCTGGACAACGGACGAGGATCAACAGTTGATGGCATGTGTGGACAAATTTCGCATCGGTAACATTATACCGTGGACTAAAGTGATGGAAAGTTGCCCGGGTCGAAGTAAACTTCAGCTGTACAACAGGTACATGTTTTCATTGAACCCAGAGATAAATCGAGCTCCATTCACCGTTGAAGAGGACTGCATACTAATGGCCGCCATAAAAGAATATGGTTTAAATTATCGTGAATTTCCAACGAATTTATTGCCCGGTCGAAGTATGAAACAAATTCGAAGTCGATACAACAATGTGTTGAAGCATGTAAATGTGCGTGAGCATTGGACTGAACAACATGATCAAAAGCTAATGCAATTGGTTGAACAGCATGGTACAACCGAATGGGCAAAAATTGccgaacaaatgataaatcatAGTCGAACATCATGCCGTCAACGATACACAACGATAAAACGATTTCTTGACAAACATCCCGGTAAAACGGTACTCGATGTACCACGACGAAAACgtgcattttcaacaaatgttaCCACCGACAATTGGATGAAAACAATCATTGAAGCGaaacatttcgattcaatcgaatcagctgaatcaatggaatttcaaGTAAACACTGGTccacaaaacaacgaaaaacccaacaacaaaacacaattataTAATACACCGTATTGGGATCTATTGAAATATTcgtataattttaaatttggtaCAGCAATTGCTGGCAGTGAtgcattatttgaaaatgttcaaattgcaTGCCAATTATTGCAAGCACCATCACTGCCCGCCCGTATTGATGTCACGGATAAATGGTTTAGTGGTTTTgtgcaaatggaaaaacaagcgaaaaaaatccaacttGAATCGGATTTACTGCGTTCACTGATTCAATTgggaaaaaatgattttttttatcccgTCAATTTCAATACCGTCCTTGGAATGCGTGGATTAACAATTATGTTTGAAACGGTTGATAAGAGAAAATCATCGGCCAAAGCTATTAAAGCCGAACCAAATGCCATTGAGGAACATGATGCGCTCAATCTCTTTAAAATGCgttttaaatccatttttaagCACACGGCAGCCGTTTCACAGTTACAACGATCACTAACATCGGTTTCACTGCGATTAAGGAATCAAAAACGAAGCCTAATGGAAATGCAAATGGTCACACCGTTAAATCCAGATGTTGACACCAATACCGCTGATCAACATTTGGTTGGTGTTCAAACCGAACCCAAAATCACAACAATATGTGAATCGGAAGAGTTAACAATGAGCGAAAGTGAATGTCAACCACGGAAACGATGCCGTGTTACCGTTCTCGAGAGTATTCCAGTCAATATAATCGATCAAAATGCCATTGATCCATTATCACAAGCATCAACATCCACTGAAATTAAATACAATCGCTATCGATATCGTGTTGAAACATCAGACAGCATTcatgaaaccaaaattcaacCGTATTACAGTGAAAGTGAAACAGAAGGTACGGTTGGTGATGAGACGGATTTTGTCATTTGGACACCAACTCTAACTGATGAAGCTACCGGTTCGACTACAATTAAACCAGAAAAAAAGTga
Protein Sequence
METVGFINEPLTQTGYGLSDDNQSTDSHLGSSVNEEKTNSIDDDDDDNVNVKSEMEANELEYVIEIDGSSDEEDMIDDPFRILNPKDVTHGIGTRSSLRLMARANDESNAQKPSCSKNAKRFNCKLCEYGSDHKGSLSVHMRTHNKEKPFRCSRCSKRFTNSSHLKSHMRTHNKPHRCSHCSKRFNQLQLLKTHMTTHKDRRLLFHCKGCFQRFAKESEKKAHEKGCRYRRYECDICKNFVTRYKSHMETHMRVHTGETPFRCKVCMKCFNQKGNLKKHMKNVHNRRNLLSTSYTKVQIETKGGQTETGDFINEPSAQAGYGISVKEENINLIDDNVNVKWEEIETRVDSVVEKLNSGYEEDIDESQNYHLETKIEWEETDWTNDAFGNEVSHNNDEGNIDDDYVSLNDGYSTGNDVTNGNRDGSSSRRKKKKEKPSCLKPSKDSKRFKFPKESEKKDHEKDCRYRRYECDICKKYVTNNKTQMEIHMRSHTGEKPFRCESFNRLSTSYTKVQTEINRSQMETVGFINEPLTQTGYGLSDDNQSTDSHLGSSVNEEKTNSIDDDEDDNVNVKLEENANELEYVIEIDGSSDEEDMIDDPFRILNPKDVSSNGGCRTDGDVSHGIGTRSSLRLMARANDESNAQKPSCSKNAKRFNCKLCEYGSDHKGSLSVHMRTHNKEKPFRCSRCSKRFTNSSHLKSHMRMHNKPHRCSHCSKRFNQLQLLKTHMTTHKDRRLLFHCKGCFQRFAKESEKKAHEKGCRYRRYECDICKKFVTRYKSHMETHMRVHTGETPFRCKVCMKCFNQKGNLKKHMKNVHNRRNLLSTSYTKVQIETKGGQTETGDFINEPSAQAGYGLPDDDQSTSSFLGISVKEENINLIDDNVNVKWEEIETRVDSVVEKLNSGYEEDIDESQNYHLETKIEWEETDWTNDAFGNEVSHNNDEGNIDDDYVSLNDGYSTGNDVTNGNRDGSSSRRKKKKEKPSCQKPSKDSKRFKCMHCEYGTNEKGNLNQHIRTHTNEKPYRCSCCDKCFVHSSSLKRHMAKNKYEFPFHCSKCFRRFIRKNEKESHEQRCGNHSNKYECYVCKYFTSIKPHLVRHMRTHSGNKPYRCSQCSKVFTQSLNLKMHMTTHKDKNLPFHCKGCFRRFPKESEKKDHEKDCRYRRFECDICKKYVTNNKTQMEIHMRSHTGEKPFRCENDSEYDEWVVDDINYVQEAQQMVCNYSQISIENALILNKQMRSYLNDLKHELERMLSVCQEKYKQNDVRLADMSKIKPTPKIYTTYYFCGYPFFKDRMGGAPPKSAEYLRRSETDGELFPLDLEKRALWLPRDKVELVQGVKKQTIAYLQSMHRNRIRQAAGKRCASELTARIQNESDALENMHLSELFKKTEGSDFRINWFNVSMDALQDRHSANECMAMWNAYLMPTLNRKSWTPAEEDKLLNAAIKYDAQNWPEIAKAVENRSVYQCLVHYQTQFNVKSVQKNVRWTTDEDQQLMACVDKFRIGNIIPWTKVMESCPGRSKLQLYNRYMFSLNPEINRAPFTVEEDCILMAAIKEYGLNYREFPTNLLPGRSMKQIRSRYNNVLKHVNVREHWTEQHDQKLMQLVEQHGTTEWAKIAEQMINHSRTSCRQRYTTIKRFLDKHPGKTVLDVPRRKRAFSTNVTTDNWMKTIIEAKHFDSIESAESMEFQVNTGPQNNEKPNNKTQLYNTPYWDLLKYSYNFKFGTAIAGSDALFENVQIACQLLQAPSLPARIDVTDKWFSGFVQMEKQAKKIQLESDLLRSLIQLGKNDFFYPVNFNTVLGMRGLTIMFETVDKRKSSAKAIKAEPNAIEEHDALNLFKMRFKSIFKHTAAVSQLQRSLTSVSLRLRNQKRSLMEMQMVTPLNPDVDTNTADQHLVGVQTEPKITTICESEELTMSESECQPRKRCRVTVLESIPVNIIDQNAIDPLSQASTSTEIKYNRYRYRVETSDSIHETKIQPYYSESETEGTVGDETDFVIWTPTLTDEATGSTTIKPEKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00133607;
90% Identity
iTF_00133607;
80% Identity
iTF_00133607;