Aaph011702.2
Basic Information
- Insect
- Aphidoletes aphidimyza
- Gene Symbol
- retn
- Assembly
- GCA_030463065.1
- Location
- CM059998.1:32455680-32461945[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-19 2.5e-16 60.0 0.0 17 89 12 82 5 82 0.95 2 3 3 5.3e+03 -2.0 0.0 33 50 121 141 116 184 0.68 3 3 3.1 5.6e+03 -2.1 0.0 28 42 276 290 266 308 0.76
Sequence Information
- Coding Sequence
- ATGCAAACCGCGGCGCACAACCCAAACATTATTGGTACACCCATCAATCGGTTGCCAATCATGGCCAAATCTGTGCTGGATTTGTATGAACTGTACAATTTAGTGATAGCTCGAGGCGGTCTAGTTGATGTTATCAACAAGAAATTGTGGCAAGAAATTATCAAAGGATTGCATCTTCCATCGAGTATCACAAGTGCTGCCTTCACTCTACGAACACAATACATGAAATATTTGTATCCATATgaatgtgaaaagaaaaatttgagCACACCGGCTGAATTACAAGCGGCCATTGATGGTAATCGTCGTGAAGGAAGACGCTCAAGCTATGGCCAGTTCGATTCACAAATGCAAGGACAACTACAACAATTGCAACAACAGGTACAACGTTCACCATTACCCGGCGGTTTACAACAAATGTCACCATTGTCATTGGTATCGCATGGCGCAACACAGAATTCACATCATCGTATGCTAAACAATCCACAAATGGGTCTGCTTCCAAACCAAATGACCGATATTGAACAGCGTatgcttgaatattttaaaatgttacaACCACAAAAAGAAGCTGCACgTTCGCAAAGTCCGGATTGTATCCGAGCGGacacattgaatgcattgGAAATGTCACGTGTCGCTCTTTGGTCCATGTATAACAATAATGCCAGCCCACCAACGTCGAACAACACAACTAGTCCACCCAACAATGAACCGCAACGAGAGGCATTGAATTTAACCGAATCACCAACGCATGGGATCAAACGTGAACGCGACACTGAACGTGATTTTGATCGTGAGGAACGTGACTATGCATTGCCAATGTCGAAAAAAGTCGCCTTACATCAGTTGCACTCACAATTTCAGCAATCGCAACGCGTATCGCCGCACAACCATTACAATGAGCATCGTCGGCGTTCCGTTACACCACCGTCACCACATCATCGTAATCGTTCGATTGAACGTGATCATGGTCATGAGCATCGAAATGGTTTGCTCAGTTTTCATGagaatcaaaatcattcatcATCACGCCGGCACATGTCCGCCTCACCTCCATCATCAAATCATCGAAATGGTACAAATAATACAAGTCACAATGGCAGCAATGATCTCCTGAATGCATGCAGCCCACTCGCTCTATTGTCTGGcatgcaatttaaattgtttagcCGAGGTTCCGAATCTGGTGAACAACAATTGGTTGTTTCAATGGAACTAAATGGTGTGCAATACGAAGGTGTTTTATCAGCAAATCGTGTGAATGCAACGCAATCAACGAGCCCATCAACCGCATCGCCACCGTGTACACCCAGTAAAATAACACCGACCACAGCATCCAGTGGTGCGAGTGCTAGCAGCCCAATGGTTGAAGATCGGCCAAATCGAATTGTTCCAACGGTATCACGCCCGTTAGTGTCGTCTTGA
- Protein Sequence
- MQTAAHNPNIIGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQFDSQMQGQLQQLQQQVQRSPLPGGLQQMSPLSLVSHGATQNSHHRMLNNPQMGLLPNQMTDIEQRMLEYFKMLQPQKEAARSQSPDCIRADTLNALEMSRVALWSMYNNNASPPTSNNTTSPPNNEPQREALNLTESPTHGIKRERDTERDFDREERDYALPMSKKVALHQLHSQFQQSQRVSPHNHYNEHRRRSVTPPSPHHRNRSIERDHGHEHRNGLLSFHENQNHSSSRRHMSASPPSSNHRNGTNNTSHNGSNDLLNACSPLALLSGMQFKLFSRGSESGEQQLVVSMELNGVQYEGVLSANRVNATQSTSPSTASPPCTPSKITPTTASSGASASSPMVEDRPNRIVPTVSRPLVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01350470;
- 90% Identity
- iTF_01350470;
- 80% Identity
- -