Aaph012508.2
Basic Information
- Insect
- Aphidoletes aphidimyza
- Gene Symbol
- Rel
- Assembly
- GCA_030463065.1
- Location
- CM059998.1:44370062-44373400[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-41 9.3e-38 130.0 0.1 1 168 48 230 48 231 0.91 2 2 0.23 7.4e+02 0.1 0.3 37 99 563 626 551 666 0.75
Sequence Information
- Coding Sequence
- ATGTCGGATAATATGTCACCGTTATCACCAGTCTCATCGAGTGACAGTAGCAGTGCatataattttcaacatttgcaaatttcaccaaattccAACAAATATctgatgaattcaatgaacGCACGAATGGATGAACCAATTTTAGAGATAACGGAACAACCGATCGACAAATTTCGTTTTCGCTATAAATCTGAAATGCATGGAACGCATGGCATGCTAACCGGTCAACATTCTAAAAAGACATTCCCAACCGTTCGTCTACGGAATTTCAATGGTGAAGCGCTGATACGGTGTTCTCTGTATCAAATACTGAAACCAGGACATGAAATGCCATTTCCACATTCTCATTCGTTGGTTGTGCGATGTGGCAATGAGGATAAAAAAGATCCACATGAAGTGATGGTGTCGCAAATGCATGGATATAAAGCAACATTTCAAGGCATGGGCATTATTCATACGGCACGTCGATTCATTGAAGATGAATTATTCGAGAAGCTAATGGCCAAAGCCGAATTTGAAGGTGGACGACCATTAACGAAAGAGCAACAGGAAACGTTACGTACGAAGGCGAAAAAGTATTCAACGGACATGAATCTGAATCAAGTTTCGCTATGTTTTGAGGCCTACGAGCGTGTTAATGGAAATTGGATACGATTGTGTGAGCCCATTTTCTCCACTCCCATTAACAATTTGAaAAGCGCACTGACGGGTGAACTGAAAATAAGCCGTATGAGCACAGTTGTTGGAAATGCAGCTGgaaatgatgatttatttatgtttgtaGAAAAAGTTGGAAAAAAAAATATTAAGGTGCGGTTTTTCGAGCAAGATGACGATCAAATGGTATGGGAAGATTGGGGCAAATTCACAGAAGCCGATGTTCATCATCAATATGCGATTGCCTTGAAAACACCACCATATCGGCGAACTAATATTGAAGAAAGCGTCAAGGTTTACATACAACTCTATCGGCCTGGCGATCTAGCCATCAGCGAAGCGGTTGAGTTTCGATATAAACCATCTTACAATATAAACAGCAACCGGAAACGGCCACGCGTTGCATCTTTCTATGATTCAGATATTCCATTAGTTGTGGCTGAAAATCCATACATACATAATCTACCCGATAGTTATGTACCGCAAAACGATAATATGGTCGATGAAAGTGacattgaacaaatgtttCCCGATTTATTCAATGCCAGTGAAAGTGAGCTGGCTCTTAACTCAGACGACTTTAGTTTATTGTTGCGCACACTAAGTGAAAATAACGAATTCGATAAGCTGGCCAAAGATTCTGTTAGCATTGACGATGACATTTTACAAACACCATCCAAGGAAGAGAAATGGATATGGCAATTTCTGGAAAACATTTCACCACTGCTCAAAACCACACCGGATGCACAACGTTTTAAAATGTGTCGCAAATTTTGCGAATTTATGTTTCACAAGGCACATTTTAACGGCGATAGTATGGTTCATATTTGTGTGAAAAGTGATGATCTTAAATTAATGGATCATTTGTACGAGATTTTCCATACATTTGAACTGTATGAATTGTTGAATGTACGTAATTATAATAAGGAAACCGTTGCACATTTGGCATGTGCAATGAACAAACCGAAACTATTGCAAGAAATGTTGGAACATGGTGTTGATGTGAATGCCGTTGATACAGATGGCAATACAGCGTTACATATTGCCATACATGAGAATAGTGTTGAAtgtgtttccattttattgaGCATTGGTGACAACACCAAAACCGTTACCAAACATAACATTGATTTGAGCGTATTCAATGATAACGGATATACGGCATTGCATTTGGCCGCAATGAAAAATATGGTGCATGTGATTGAAATGCTCGACACAAAAGCGGCACACATGAAACAGCCCATTTTCGATGACATTGAAGGTAAACATGGTAATAATGCGTTGCATATTGCAATTGAATCGGAAGCGTATACGGTTGCTGAATATTTGGTACACAATAAGTGTATAAATCCCACAAAAACCAATAAGTCTGGACACACTGCAATCTATTTGGCGCGAGTCGCAAAAGCAAATGAACTAGtgaatttaatgcaaaaatacaatttaatcgATGATGAACGTTTAatggatgatgatgatgatgccaGCTCAAaagattcatttgaatcacaGGAAACAAACAAGACAAGTACATCAAGCTCATCGACACGAccgattgaattcaataatgTCGAACCGAATTTCGGTGAAAAGAAATTTGACGATTGTTGTTATATTGAATTGAGTGACATATTCAATAAGAATGGAAAATGGCAATCGATTGCCACGTTGCTGGGCTATCAAGATTTTGTGGAAAGATGGCAAAAATTGCGAAATCCCACCAAAGTTCTGCTCATGTACGCAGAGTCGTTAAAAGTACCAAAAGACACATTGGCTGACATATTTGAAGAGGTCGGTGAAAAACGGGCCGTTGAATGCATACACGAATGGAAGAATCGGTTTAGTGGTCGCACGTGA
- Protein Sequence
- MSDNMSPLSPVSSSDSSSAYNFQHLQISPNSNKYLMNSMNARMDEPILEITEQPIDKFRFRYKSEMHGTHGMLTGQHSKKTFPTVRLRNFNGEALIRCSLYQILKPGHEMPFPHSHSLVVRCGNEDKKDPHEVMVSQMHGYKATFQGMGIIHTARRFIEDELFEKLMAKAEFEGGRPLTKEQQETLRTKAKKYSTDMNLNQVSLCFEAYERVNGNWIRLCEPIFSTPINNLKSALTGELKISRMSTVVGNAAGNDDLFMFVEKVGKKNIKVRFFEQDDDQMVWEDWGKFTEADVHHQYAIALKTPPYRRTNIEESVKVYIQLYRPGDLAISEAVEFRYKPSYNINSNRKRPRVASFYDSDIPLVVAENPYIHNLPDSYVPQNDNMVDESDIEQMFPDLFNASESELALNSDDFSLLLRTLSENNEFDKLAKDSVSIDDDILQTPSKEEKWIWQFLENISPLLKTTPDAQRFKMCRKFCEFMFHKAHFNGDSMVHICVKSDDLKLMDHLYEIFHTFELYELLNVRNYNKETVAHLACAMNKPKLLQEMLEHGVDVNAVDTDGNTALHIAIHENSVECVSILLSIGDNTKTVTKHNIDLSVFNDNGYTALHLAAMKNMVHVIEMLDTKAAHMKQPIFDDIEGKHGNNALHIAIESEAYTVAEYLVHNKCINPTKTNKSGHTAIYLARVAKANELVNLMQKYNLIDDERLMDDDDDASSKDSFESQETNKTSTSSSSTRPIEFNNVEPNFGEKKFDDCCYIELSDIFNKNGKWQSIATLLGYQDFVERWQKLRNPTKVLLMYAESLKVPKDTLADIFEEVGEKRAVECIHEWKNRFSGRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -