Aaph003224.1
Basic Information
- Insect
- Aphidoletes aphidimyza
- Gene Symbol
- Bgb
- Assembly
- GCA_030463065.1
- Location
- CM059996.1:35653861-35659571[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-79 4.3e-75 251.1 4.4 1 165 29 191 29 193 0.94
Sequence Information
- Coding Sequence
- ATGATGAACGACGCATTGGCTGGTATGATCCCATACGATTCGATTGGATTGTATGAACAACCAAAACCgagatttttctttaaaatgcCGCGCGTTGTGCCGGAACAAAAGTCGAAATTCGAAAGTGATGAACTCTTCCGACGCTTGAGCCGTGAAAGTGAGATTCGTTACACAGGATTCCGAGACCGTCCACAAGAAGAGCGACAAATTCGTTTCCAGAATGGTTGTCGTGCCGAAGGTCGTACAGAGATTGCATTCATTACATCTGGAACAAATTTCCAACTAACATTCAATTGCAACATGACGCCGTATGGACATGAACGAGAATGTGATTTCGAAAAAGAGCATGGCAAAGTTCACATCAAATCGCATATGATCATGAATGGAGTTTGTGTACGGTTTCGCGGTTGGATTGATCTGGAACGTTTGGATGGTGTTGGCTGCTTGGAATATGACGAACGTCGTGCAGCTCAAGAAGATGCAATTTTGCGTGATCAAATCGAACGGTACAATCAACGTTTGCGTGATTTTGaggacaacaacaaacgtGGCTATCGTGGTGAAAGACAAGACGATCTAGATGCCGTTCGACGTGGTGGCATTGGTGTTGGTGTCAGTGCTGGCATGTGGAGACGATAA
- Protein Sequence
- MMNDALAGMIPYDSIGLYEQPKPRFFFKMPRVVPEQKSKFESDELFRRLSRESEIRYTGFRDRPQEERQIRFQNGCRAEGRTEIAFITSGTNFQLTFNCNMTPYGHERECDFEKEHGKVHIKSHMIMNGVCVRFRGWIDLERLDGVGCLEYDERRAAQEDAILRDQIERYNQRLRDFEDNNKRGYRGERQDDLDAVRRGGIGVGVSAGMWRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00956801; iTF_00132988;
- 90% Identity
- iTF_00956801; iTF_00132988; iTF_01350437; iTF_00366979; iTF_01287866;
- 80% Identity
- -