Basic Information

Insect: Aphidius gifuensis
Gene Symbol: -
Assembly: GCA_014905175.1
Location: CM026526.1:7283396-7289739[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.33 29 4.8 4.8 1 23 481 503 481 503 0.98

2 20 2.6 2.3e+02 1.9 3.8 1 21 509 529 509 532 0.95

3 20 8.9e-05 0.0078 16.0 0.8 2 19 539 556 538 560 0.90

4 20 9.4e-05 0.0083 15.9 4.4 1 23 566 588 566 588 0.99

5 20 0.0003 0.026 14.4 0.1 3 23 596 617 594 617 0.94

6 20 0.99 87 3.3 1.8 1 23 624 647 624 647 0.97

7 20 2.2e-05 0.0019 17.9 1.3 1 23 651 673 651 673 0.97

8 20 0.0011 0.093 12.6 0.5 1 23 679 701 679 701 0.97

9 20 1.9e-05 0.0017 18.1 2.0 1 23 707 729 707 729 0.97

10 20 2.6e-06 0.00023 20.8 2.9 1 23 734 756 734 756 0.97

11 20 0.63 56 3.9 0.5 1 19 1046 1064 1046 1065 0.82

12 20 2.2 1.9e+02 2.2 4.6 1 23 1074 1097 1074 1097 0.96

13 20 0.0012 0.1 12.5 0.7 1 23 1103 1125 1103 1125 0.97

14 20 0.031 2.8 8.0 2.9 1 23 1131 1153 1131 1153 0.97

15 20 4.5e-05 0.004 16.9 0.8 2 23 1160 1181 1159 1181 0.97

16 20 0.027 2.4 8.2 0.9 2 23 1188 1210 1187 1210 0.93

17 20 3e-05 0.0026 17.5 2.3 1 23 1214 1236 1214 1236 0.99

18 20 0.053 4.7 7.3 4.7 1 23 1241 1263 1241 1263 0.98

19 20 1.8e-07 1.6e-05 24.5 0.5 1 23 1269 1291 1269 1291 0.97

20 20 1.6e-05 0.0014 18.4 0.3 1 21 1296 1316 1296 1317 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.33	29	4.8	4.8	1	23	481	503	481	503	0.98
2	20	2.6	2.3e+02	1.9	3.8	1	21	509	529	509	532	0.95
3	20	8.9e-05	0.0078	16.0	0.8	2	19	539	556	538	560	0.90
4	20	9.4e-05	0.0083	15.9	4.4	1	23	566	588	566	588	0.99
5	20	0.0003	0.026	14.4	0.1	3	23	596	617	594	617	0.94
6	20	0.99	87	3.3	1.8	1	23	624	647	624	647	0.97
7	20	2.2e-05	0.0019	17.9	1.3	1	23	651	673	651	673	0.97
8	20	0.0011	0.093	12.6	0.5	1	23	679	701	679	701	0.97
9	20	1.9e-05	0.0017	18.1	2.0	1	23	707	729	707	729	0.97
10	20	2.6e-06	0.00023	20.8	2.9	1	23	734	756	734	756	0.97
11	20	0.63	56	3.9	0.5	1	19	1046	1064	1046	1065	0.82
12	20	2.2	1.9e+02	2.2	4.6	1	23	1074	1097	1074	1097	0.96
13	20	0.0012	0.1	12.5	0.7	1	23	1103	1125	1103	1125	0.97
14	20	0.031	2.8	8.0	2.9	1	23	1131	1153	1131	1153	0.97
15	20	4.5e-05	0.004	16.9	0.8	2	23	1160	1181	1159	1181	0.97
16	20	0.027	2.4	8.2	0.9	2	23	1188	1210	1187	1210	0.93
17	20	3e-05	0.0026	17.5	2.3	1	23	1214	1236	1214	1236	0.99
18	20	0.053	4.7	7.3	4.7	1	23	1241	1263	1241	1263	0.98
19	20	1.8e-07	1.6e-05	24.5	0.5	1	23	1269	1291	1269	1291	0.97
20	20	1.6e-05	0.0014	18.4	0.3	1	21	1296	1316	1296	1317	0.94

Sequence Information

Coding Sequence: atggagGTGAAAATTGACAATGAAGCGCAAGTCTGTAGACTTTGTGGACAATTTGAGAGTATCTACATTGATGTTTTTGGTGATGAAGGATCAAAGAGACTTCTTGGTcttaaaattcaatcaaaaataaatattttgaTTGATGAAACGGATCCTTTGCCAAAGACGATCTGCGTACAGTGTCTTGGAAAACTCGAATTTGTATGTGACTTTCAAGAGGAGTGTCTACGTACTCAACGTTTATTACGTAATCGTTATGATCTTCCACCACTGCCAGATATTgaaaatgatattaaattggAAATACAAACATCATCAACTCAATCATCACCCAGTACAtcaacaaacaacaataacaacaacaccaccaacaataacaacaataacaacaataataataataatgaaaataaaaatcataattcaACAGCTGATATTGAAAATGTTGATCCATCAATTGAAGATACAACAATTGTACAAACAAATACTGAAACAATACGTCCAAAACGTATTATTAAAACTCCAACTAgaaataaatgtcaaataaaagataacaataataataaagataataaagataaaaatatattaacaattgaaacacCAGAGTTAACAAAAAGATGGCTAAGAAGTCGTAATACAACTGACACATCAAcaccaaaattaaaacaacaacaacaaaaaacatcatcatcatcatcatctgcaaaaaaaataaaactacaaaCAAATGAATcaacaccatcaacatcaaatacaaataatgtATCAATTGTAACACGTTTACGTAGTTCAAgtcaaaatcaacaacaaaaactaaatatatcattaaataataataataaaaaatcaaataaatcacaagatgataaagaaaaacgTACATTACAAATTCCAACATCAGCATTAGATAAAGTTATAACAGCAGTATCAACATCAACAGACGTCAAAGTATCAGTTaaagaaacaacaaaaaataataaaaataatagcagcaataataataataataataataatgaagatatTAGTTTTacacttgaattaaaaaaaaaagaaaaaataaatgatacatCATTGACAGTATTGGCAAAAGTATTTCCTGATCAAAATTCATCACTTGTTGATTctgaaataattgatttacttgatgataattcaCATATAAATAAGCTAATAAATACAGTacaatcaaaaacaaaaacaacaacaacaacaacaacaacatcatgtaaaaatagaaaaaatatatcatcatcaattgatgatgattcagTTGATGATTTAGAATTACGTTTAGCACAAATAACTGAAGGTATTGGTTTTGATAATGATGGTAATTTATCACGTAATCCAGAAGAATTATATCGTATTGATGGTGAAGAAATACgtgttgatgataatgttgatatAATAACAACAGCTGATGGACCAACTGGTTATTCATGTAAgctatgtaaaaaattatatgaaagaCGTGATAAATGTACAGTGCATGTTAAAACACATTTAGGAATAAAACAATATGCATGTACATTATGTACAGCAAAATTTGTATGTAAATCAGATGTTATGAAACATATTAGATGTTCACATACAAATCCACGTCCAATGCAATGTCCAAAATGTCCAAAACGTTTTAGatcaaaatttgatttaactGAACATGATAATATACATAAAGGTATTAAACCATATAGATGTAATGATTGTGGACAAAGTTATCATCATAAAGTATCATTACAAATGCATGTTAAATCACATTTACCACCCCAAAATTTAGCATGTGAATATTGTGGTAAAGTATTTCCATTTCGTACAAGATTATTATCACATATTGCAAgtgtacatttaaaaaatcgtcGTAATTTTCGTTGTagattttgttataatttatattcaagtttaaatgtattaaatgATCATATTAAAACACGTCATGCAACAACATATACATGTGATATATGTTCAAAAACATTTAAagtatcatcaaaatataaagCACATGTATTACAACATACTAATCCAAAACCATATGCATgtaaaatatgtaataatcGTTATGCATCAAAagcatttttaaatgaacatttattaaaacatgAAGGTTTAAGAAAACATGTTTGTCAAAAATGTGGTGCTAGTTTTGCACAAGCAAGTCATCTTGCTGCACATAGACATGTACATGGTGAAAAAACTCATATATGTCCAGAGTGTGGAAGAAAATTTAATCGTCGTGATAATATGAAAGTACATAGAAAACGTCATGCTGCTGAAACTGGAAGAATTGTTGATGGTTATAAGagtattattgatgatgacgatgatgatgatgatggtggatatgatgatgatgatgatgttgataTTAAAAAAGATGATGGATTACCACATACAATATGTATTCGATGTGTTGGTACATTGGAATTTCTTgtggatttttataaaaattgtcagGAAACTCAAAAACTTTTtcaggGTAAACAGAAAATTACTGATGTTGATTTAGAGACtgtagaaattgaaaaaaactctgacaaagaaaatgattcatcaacagTACcagtctttaaaaaaaaatctaaaaatgttCTTAGTGAAATATCATCTGAAAATATTACATCAAATCTTGAAGCTTATCAgcctttatttttaaattcaaaattatataaaaataacaaaccatcaaataaaaatcaagaaatatcatcaaaaaataatgaaaatgataataatatatttgaaaaaataataaaaataaaacaagaattaaataatgatgaaaattattcaacaaattcaaATGGTAAAAATGAAAAGCCAATTGATACACCTGAATctgaaaatttgaatattaaaaatgaattaaaaacaaatacatcatcatcattaacaggcattaataataaagaaaataataaaataaaaactgttgATGACAAGACAGAATTACcagttaattattatgaaaatttaaatatatcaaaggTTCGTAAAAATAGTTtgtatggaaaaatatcagattTAATAAGTAAagaagataaagaaaaaattgaagaatattACAACATAGATATGTCAgctgttgatgaaaaaaaagtattagaaagaattgaaataattgatcgtaaaaaatttatgtgtaaaatatgTGATACAATATATCCACGAATGGATAAATGTCAAGTACATATCTGGGGACATTTTGATATGAAACcatataaatgtaataaatgtaattttaatacattAACTGTTACAAATATACGTAGTCATATACGtaaatgtcatttaaaaataaaaccattcaactgtttattttgtaataaaaaatatgctacATCTGTTTTACTTGATGAACATTTAAATACTCATACTGGTGTTAAAccatttaaatgtaattattgtaattataaaagttCAAGTAGAcaagtattaaattatcacaatgaaacacataaaaaaattaaagatgtAACATGTGATATTTGTAaacgtaaattttattcaaaaggTAGATTAAGAGTACATATTTTAACacataataaagataaaaatttaatatgtaaatattgTTCACAACATTTTACAACAATTGAAGCTGTTAGCAAACATTATGATAGTGTACATTCACATGATTATACATGTTcatattgtgaaaaaaaaagtaaatctaaaaaagcacttaataatcatttaaaagtaCATTTTGATGCACAATATAAATGTCATTTATGtacaaatgtttataaaagTAGTCATATATTAAAAGAACATATATTAAAACATCAAGGAAttagaaaatacaaatgtgatgtttgtgataaatcatttgCACAACAATCACATTTAGCTGCTCATAAAGCTGTTCACAGTGATAAGagatTTATTTGTCCAGGATGTGAAAAAGCATTCAATCGTCAGGACAACATGAAATCACATACTAAAAaatgtgaattatttttatcaaatcctgatttaaaaaatatttttaatcgttcaaaatcatcaaagttaaatattgtaaataatgatattaattattcaacattttcgtctttaaatgaaaataattttatcaatgataatcaagctattgataaaatacaaaatgaaaaattaactttttcttCTGATAAAGCTGTCATTTCTGAAAGTGTCATCAGCATCAAGGcgttttaa
Protein Sequence: MEVKIDNEAQVCRLCGQFESIYIDVFGDEGSKRLLGLKIQSKINILIDETDPLPKTICVQCLGKLEFVCDFQEECLRTQRLLRNRYDLPPLPDIENDIKLEIQTSSTQSSPSTSTNNNNNNTTNNNNNNNNNNNNENKNHNSTADIENVDPSIEDTTIVQTNTETIRPKRIIKTPTRNKCQIKDNNNNKDNKDKNILTIETPELTKRWLRSRNTTDTSTPKLKQQQQKTSSSSSSAKKIKLQTNESTPSTSNTNNVSIVTRLRSSSQNQQQKLNISLNNNNKKSNKSQDDKEKRTLQIPTSALDKVITAVSTSTDVKVSVKETTKNNKNNSSNNNNNNNNEDISFTLELKKKEKINDTSLTVLAKVFPDQNSSLVDSEIIDLLDDNSHINKLINTVQSKTKTTTTTTTTSCKNRKNISSSIDDDSVDDLELRLAQITEGIGFDNDGNLSRNPEELYRIDGEEIRVDDNVDIITTADGPTGYSCKLCKKLYERRDKCTVHVKTHLGIKQYACTLCTAKFVCKSDVMKHIRCSHTNPRPMQCPKCPKRFRSKFDLTEHDNIHKGIKPYRCNDCGQSYHHKVSLQMHVKSHLPPQNLACEYCGKVFPFRTRLLSHIASVHLKNRRNFRCRFCYNLYSSLNVLNDHIKTRHATTYTCDICSKTFKVSSKYKAHVLQHTNPKPYACKICNNRYASKAFLNEHLLKHEGLRKHVCQKCGASFAQASHLAAHRHVHGEKTHICPECGRKFNRRDNMKVHRKRHAAETGRIVDGYKSIIDDDDDDDDGGYDDDDDVDIKKDDGLPHTICIRCVGTLEFLVDFYKNCQETQKLFQGKQKITDVDLETVEIEKNSDKENDSSTVPVFKKKSKNVLSEISSENITSNLEAYQPLFLNSKLYKNNKPSNKNQEISSKNNENDNNIFEKIIKIKQELNNDENYSTNSNGKNEKPIDTPESENLNIKNELKTNTSSSLTGINNKENNKIKTVDDKTELPVNYYENLNISKVRKNSLYGKISDLISKEDKEKIEEYYNIDMSAVDEKKVLERIEIIDRKKFMCKICDTIYPRMDKCQVHIWGHFDMKPYKCNKCNFNTLTVTNIRSHIRKCHLKIKPFNCLFCNKKYATSVLLDEHLNTHTGVKPFKCNYCNYKSSSRQVLNYHNETHKKIKDVTCDICKRKFYSKGRLRVHILTHNKDKNLICKYCSQHFTTIEAVSKHYDSVHSHDYTCSYCEKKSKSKKALNNHLKVHFDAQYKCHLCTNVYKSSHILKEHILKHQGIRKYKCDVCDKSFAQQSHLAAHKAVHSDKRFICPGCEKAFNRQDNMKSHTKKCELFLSNPDLKNIFNRSKSSKLNIVNNDINYSTFSSLNENNFINDNQAIDKIQNEKLTFSSDKAVISESVISIKAF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00132147;
90% Identity: iTF_00132147;
80% Identity: -