Aerv013963.1
Basic Information
- Insect
- Aphidius ervi
- Gene Symbol
- -
- Assembly
- GCA_015776835.1
- Location
- MKYW01000040.1:170088-176447[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.42 41 4.8 4.8 1 23 478 500 478 500 0.98 2 20 3.3 3.2e+02 2.0 3.8 1 21 506 526 506 529 0.95 3 20 0.00011 0.011 16.1 0.8 2 19 536 553 535 557 0.90 4 20 0.00012 0.012 16.0 4.4 1 23 563 585 563 585 0.99 5 20 0.00037 0.036 14.4 0.1 3 23 593 614 591 614 0.94 6 20 1.2 1.2e+02 3.3 1.8 1 23 621 644 621 644 0.97 7 20 2.7e-05 0.0027 18.0 1.3 1 23 648 670 648 670 0.97 8 20 0.0013 0.13 12.7 0.5 1 23 676 698 676 698 0.97 9 20 2.4e-05 0.0024 18.2 2.0 1 23 704 726 704 726 0.97 10 20 0.0013 0.13 12.7 0.1 1 17 731 747 731 748 0.91 11 20 0.95 93 3.7 0.5 1 19 986 1004 986 1005 0.82 12 20 2.7 2.7e+02 2.3 4.6 1 23 1014 1037 1014 1037 0.96 13 20 0.0015 0.14 12.6 0.7 1 23 1043 1065 1043 1065 0.97 14 20 0.039 3.9 8.1 2.9 1 23 1071 1093 1071 1093 0.97 15 20 5.3e-05 0.0052 17.1 0.8 2 23 1100 1121 1099 1121 0.97 16 20 0.014 1.3 9.5 0.9 2 23 1128 1150 1127 1150 0.93 17 20 0.00011 0.011 16.0 2.0 1 23 1154 1176 1154 1176 0.98 18 20 0.067 6.5 7.3 4.7 1 23 1181 1203 1181 1203 0.98 19 20 2.3e-07 2.2e-05 24.5 0.5 1 23 1209 1231 1209 1231 0.97 20 20 3.4e-05 0.0033 17.7 0.2 1 21 1236 1256 1236 1257 0.93
Sequence Information
- Coding Sequence
- ATGGAGGTGAAAATTGACAATGAAGCGCAAGTCTGTAGACTTTGTGGACAATTTGAGAGTATCTACATTGATGTTTTTGGTGATGAAGGATCAAAGAGACTTCTTGGTCTTAAAATTCAATCAAAAATAAATATTTTGATTGATGAAACGGATCCTTTGCCAAAGACGATCTGCGTACAGTGTCTTGGAAAACTCGAATTTGTATGTGACTTTCAAGAGGAGTGTCTACGTACTCAACGTTTATTACGTAATCGTTATGATCTTCCACCACTGCCAGATATTGAAAATGATATTAAATTGGAAATACAAACATCATCAACTCAATCATCACCCAGTACATCAACAAACAACAACAATAACAACAACAACAACAACACCAACAATAATAACAACAATAATAATAATGAAAATAAAAATCATAATTCAACAGCTGATATTGAAAATGTTGATCCATCAATTGAAGATACAACAATTGTACAAACAAATACTGAAACAATACGTCCAAAACGTATTATTAAAACTCCAACTAGAAATAAATGTCAAATAAAAGATAATAATAATAATAAAGATAATAAAGATAAAAATATATTAACAGTTGAAACACCAGAATTAACAAAAAGATGGTTAAGAAGTCGTAATACAACTGACACATCAACACCAAAATTAAAACAACAACAACAACAAAAAACATCATCATCATCTGCAAAAAAAATAAAACTACAAACAAATGAATCAACACCATCAACATCAAATACAAATAATGTATCAATTGTAACACGTTTACGTAGTTCAAATCAAAATCAACAACAAAAACTAAATATATCATTAAATAATAATAATAATAATAATAAAAAATTAAATAAATCACAAGATGATAAAGAAAAACGTACATTACAAATTCCAACATCAGCATTAGATAAAGTTATAACAGCAGTATCAACATCAACAGACGTCAAAGTATCAGTTAAAGAAACAACAAAAAATAATAAAAATAATAGCAATAATAATAATAATAATAATAATAATGAAGATATTAGTTTTACACTTGAATTAAAAAAAAAAGAAAAATTAAATGATACATCATTGACAGTATTGGCAAAAGTATTTCCTGATCAAAATTCATCACTTGTTGATTCTGAAATAATTAATTTACTTGATGATAATTCACATATAAATAAGCTAATAAATACAGTACAATCAAAAACAACAACAACATCATCATGTAAAAATAGAAAAAATATATCATCATCAATTGATGATGATTCAGTTGATGATTTAGAATTACGTTTAGCACAAATAACTGAAGGTATTGGTTTTGATAATGATGGTAATTTATCACGTAATCCAGAAGAATTATATCGTATTGATGGTGAAGAAATACGTGTTGATGATAATGTTGATATAATAACAACATCTGATGGACCAACTGGTTATTCATGTAAGCTATGTAAAAAATTATATGAAAGACGTGATAAATGTACAGTACATGTTAAAACTCATTTAGGAATAAAACAATATGCATGTACATTATGTACAGCAAAATTTGTATGTAAATCAGATGTTATGAAACATATTAGATGTTCACATACAAATCCACGTCCAATGCAATGTCCAAAATGTCCAAAACGTTTTAGATCAAAATTTGATTTAACTGAACATGATAATATACATAAAGGTATTAAACCATATAGATGTAATGATTGTGGACAAAGTTATCATCATAAAGTATCATTACAAATGCATGTTAAATCACATTTACCACCTCAAAATTTAGCATGTGAATATTGTGGTAAAGTATTTCCATTTCGTACAAGATTATTATCACATATTGCAAGTGTACATTTAAAAAATCGTCGTAATTTTCGTTGTAGATTTTGTTATAATTTATATTCAAGTTTAAATGTATTAAATGATCATATTAAAACACGTCATGCAACAACATATACATGTGATATATGTTCAAAAACATTTAAAGTATCATCAAAATATAAAGCACATGTATTACAACATACTAATCCAAAACCATATGCATGTAAAATATGTAATAATCGTTATGCATCAAAAGCATTTTTAAATGAACATTTATTAAAACATGAAGGTTTAAGAAAACATGTTTGTCAAAAATGTGGTGCTAGTTTTGCACAAGCAAGTCATCTTGCTGCACATAGACATGTACATGGTGAAAAAACTCATATATGTCCAGAGTGTGGAAGAAAATTTAATCGTCGTGATAATATGAAAATTAAAAAAGATGATGGATTACCTCATACAATATGTATTCGATGTGTTGGTACATTGGAATTTCTTGTGGATTTTTATAAAAATTGTCAGGAAACTCAAAAACTTTTTCAGGGTAAAAAGAAAATTACTGATGTTAATTTAGAGACTTTAGAAATTGAAAAAAACTCTGACAAAGAAAATGATTCATCAACAGTATTAAAAAATAAATCTAAAAATTTATTAAAATCACTAAATAATAATGTTCTTAGTGAAATATCATCTGAAAAAATTACATCAAATCTTGAAGTCTATCAACCTTTATTTTTAAATTCAAAATTATATAAAAATAACAAATCATCATCAAATAAAAATCAAGAAATATTATCAAAAAATAATGAAAATGATAATAATATATTTGAAAAAATAATAAAAATAAAACAAGAATTAAATAATGATGAAAATTATTCAACAAATTCAAATGTTATCAATGAAAAGCCAATTGATACAATTGAATCTGAAAAATTAAATATTGTTGATGATAAGACAGAATTACCAGTTAATTATTATGAAAATTTAAATATATCAAAAGTTCGTAAAAATAGTTTATATGGAAAAATATCAGATTTAATAAGTAAAGAAGATAAAGAAAAAATTGAAGAATATTACAACATAGATATGTCAGCTGTTGATGAAAAAAAAGTATTAGAAAGAATTGAAATAATTGATCGTAAAAAATTTATATGTAAAATATGTGATACAATATATCCACGAATGGATAAATGTCAAGTTCATATTTGGGGACATTTTGATATGAAACCATATAAATGTAATAAATGTAATTTTAATACATTAACTGTTACAAATATACGTAGTCATATACGTAAATGTCATTTAAAAATAAAACCATTTAATTGTTTATTTTGTAATAAAAAATATGCTACATCTGTATTACTTGATGAACATTTAAATACTCATACTGGTGTTAAACCATTTAAATGTAATTATTGTAATTATAAAAGTTCAAGTAGACAAGTATTAAATTATCACAATGAAACACATAAAAAAATTAAAGATATAACATGTGATATTTGTAAACGTAAATTTTATTCAAAAGGTAGATTAAGAGTACATATATTAACACATAATAAAGATAAAAATTTAATATGTAAATATTGTTCACAACATTTTACAACAATTGAAGCTGTTAATAAACATTATGATAGTGTACATTCACATGATTATACATGTTTATATTGTGAAAAAAAAAGTAAATCTAAAAAAGCACTTAATAATCATTTAAAAGTACATTTTGATGCACAATATAAATGTCATTTATGTACAAATGTTTATAAAAGTAGTCATATATTAAAAGAACATATATTAAAACATCAAGGAATTAGAAAATACAAATGTGATGTTTGTGATAAATCATTTGCACAACAATCACATTTAGCTGCTCATAAAGCTGTTCACAGTGATAAAAGATTTATTTGTCCAGGATGTGAAAAAGCATTTAATCGTCAAGACAACATGAAATCACATGCTAAAAAATGTGAATTATTTTTATCAAATCCTGATTTAAAAAATATTTTTAATCGTTCAAAATCATCAAAGTTAAATATTGTAAATAATAATATTAATTATTCAACATTTTCATCTTTAAATCAAAATAATTTTATCAATGATAATCAAGATATTGATAAAATACAAAATGAAAAATTAACTTTTTCATCTGATAAAGCTGTCATTTCTGAAAGTGTCATCAGCATCAAGGCATTTTAA
- Protein Sequence
- MEVKIDNEAQVCRLCGQFESIYIDVFGDEGSKRLLGLKIQSKINILIDETDPLPKTICVQCLGKLEFVCDFQEECLRTQRLLRNRYDLPPLPDIENDIKLEIQTSSTQSSPSTSTNNNNNNNNNNTNNNNNNNNNENKNHNSTADIENVDPSIEDTTIVQTNTETIRPKRIIKTPTRNKCQIKDNNNNKDNKDKNILTVETPELTKRWLRSRNTTDTSTPKLKQQQQQKTSSSSAKKIKLQTNESTPSTSNTNNVSIVTRLRSSNQNQQQKLNISLNNNNNNNKKLNKSQDDKEKRTLQIPTSALDKVITAVSTSTDVKVSVKETTKNNKNNSNNNNNNNNNEDISFTLELKKKEKLNDTSLTVLAKVFPDQNSSLVDSEIINLLDDNSHINKLINTVQSKTTTTSSCKNRKNISSSIDDDSVDDLELRLAQITEGIGFDNDGNLSRNPEELYRIDGEEIRVDDNVDIITTSDGPTGYSCKLCKKLYERRDKCTVHVKTHLGIKQYACTLCTAKFVCKSDVMKHIRCSHTNPRPMQCPKCPKRFRSKFDLTEHDNIHKGIKPYRCNDCGQSYHHKVSLQMHVKSHLPPQNLACEYCGKVFPFRTRLLSHIASVHLKNRRNFRCRFCYNLYSSLNVLNDHIKTRHATTYTCDICSKTFKVSSKYKAHVLQHTNPKPYACKICNNRYASKAFLNEHLLKHEGLRKHVCQKCGASFAQASHLAAHRHVHGEKTHICPECGRKFNRRDNMKIKKDDGLPHTICIRCVGTLEFLVDFYKNCQETQKLFQGKKKITDVNLETLEIEKNSDKENDSSTVLKNKSKNLLKSLNNNVLSEISSEKITSNLEVYQPLFLNSKLYKNNKSSSNKNQEILSKNNENDNNIFEKIIKIKQELNNDENYSTNSNVINEKPIDTIESEKLNIVDDKTELPVNYYENLNISKVRKNSLYGKISDLISKEDKEKIEEYYNIDMSAVDEKKVLERIEIIDRKKFICKICDTIYPRMDKCQVHIWGHFDMKPYKCNKCNFNTLTVTNIRSHIRKCHLKIKPFNCLFCNKKYATSVLLDEHLNTHTGVKPFKCNYCNYKSSSRQVLNYHNETHKKIKDITCDICKRKFYSKGRLRVHILTHNKDKNLICKYCSQHFTTIEAVNKHYDSVHSHDYTCLYCEKKSKSKKALNNHLKVHFDAQYKCHLCTNVYKSSHILKEHILKHQGIRKYKCDVCDKSFAQQSHLAAHKAVHSDKRFICPGCEKAFNRQDNMKSHAKKCELFLSNPDLKNIFNRSKSSKLNIVNNNINYSTFSSLNQNNFINDNQDIDKIQNEKLTFSSDKAVISESVISIKAF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00132760;
- 90% Identity
- iTF_00132760;
- 80% Identity
- -