Agif011068.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphidius gifuensis
Gene Symbol
Hr39
Assembly
GCA_014905175.1
Location
CM026521.1:23303338-23318006[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 4 1.1e+04 -6.1 4.1 132 169 22 60 15 64 0.58
2 5 0.15 4.4e+02 -0.6 6.0 57 132 139 219 114 238 0.67
3 5 4 1.1e+04 -8.0 21.2 58 163 246 350 224 386 0.36
4 5 4 1.1e+04 -13.6 27.1 71 160 386 487 360 500 0.46
5 5 4.3e-75 1.2e-71 241.6 0.8 1 408 591 979 591 979 0.76

Sequence Information

Coding Sequence
ATGTCGGAACGTAACGGGCCGACGGAGGGCTCGGGTTGGTGGTCACCAGCACAAATATGGAAaacttcatcatcaacatcatcatcaataacaacatcaacaacagttGCATCAACTTCAGTAATAACATCACGTTTATCAGATACAGGAAAAAATGTATcagtaacaacaataaatgtaCCCCAAGCACAAGATGTACACGAtgttaaaaatataaaatatcttggTGGTCAAAATGGTGTAACAGTATCAGTGGTATCATCGTGTGGTAGTCCAGCATCAACATTAACAGATCATCAATTACCAGAGAATTCatcagttgatgatgatgttgaagaTAGTGATGGAGAAGtatcaaaaattgattttcGTGGTGTTAATCttcgtacaaaaaaaaaacgtgattcTGAATCTGAATGTggaataacaacaacaaataataataataatgtacatcatcaacaacaacaacaacaaccagaAAGACCAATGTCATGGGAAGGTGAATTATCTGATCATGAAATGTCATCAAATACAATTATGAATCAAGATCATGAAGAAACATCAATGGAAGGTGTACAAGCATGTAGTCCAAGTCCAGTAACACCAGAAACACAAAAATATCCAATTAAACCAGAACCTGATTATTGTTCAAGTCCTGGATTATCTTCTCATGAAGCTGTAATGCCACTTTCACATTCTCAACATttacaaaatcatcatcatcatcatcatatacaaaatcaacaacaacaacaacatcatcaccatcatcaattacaacaacaacagcagcatcaacatcatcatcaacaacaacaattgcaCTCTCAGCGAGACGatcaaaatcaacaaaatgatttaccattaattgttgataagtTGCtggataattataataatacaacaccAAATCACAGTCCAATATTAAATCCACGTCATCATTTAACAAAACATGGTCATACAAGATCACAAGTACCATCACCTGATTCAGCAATACATTCGGCATACAGTGTATTTTCATCACCAACACAAAGTCCTCATGCTGCACGTCATTCAGCTCTTGGTTCTGGTAGTCCAAtaccatcatcaacattatcacgtcaaagttttaataattcaacatcatcattatcattgtcaCATTCATTATCACGAAATAATTCTGATGCTTCAAGTAGCTGTTATAGTTATGGTTCTCTAAGTCCACCAACTCATTCACCTATTCAACAACCACGTCATgcacaacatcatcatcagcatcatcatcaccatcagcagcatcatcaacatcatcatcatcaacaacaacaacaacaacagcaacatcatcaacaatcacaacaacaatatcatcagCAAATATCACAAACTGGAAGCCCATTACATTTACCtatatcatcaccatcatcatcatcatcatcaacaataacaaatacttataataataatagtaataataatcaaacagATTTATCTGAACAACATGATGATCAAGAAGATTGTAAAGTACCTCTAGCCTCATCAGGCATATCAACAAGACAACAACTTATAAATAGTCCATGTCCAATATGTGGTGATAAAATAAGTGGTTTTCATTATGGTATATTTTCATGTGAATCATGTAAAGGTTTTTTTAAACGTACTGTACAAAATCGTAAAAATTATGTATGTCTTAGAGGAGCAATATGTCCAGTAACTGTTGGTACACGTAAAAAATGTCCAGCATGTCGTtttgataaatgtttaaatatggGAATGAAACTTGAAGCAATTAGAGAAGATAGAACACGTGGTGGTAGAAGTACATATCAATGTACATATACAATACCAGCAAATTtaattggtaataataataataataataatacaaatagtTTATCTGGTGATAAAATGACTGGTGGTAATTGTAGTCCAGCACCATCTGGTAATGAACATTATCATAGTAGTGGTGGTAGTGgaggtggaggtggtggtagACATCAttggaataatttaaataaattaccagtACCACAATTATTACAAGAAATAATGGATGTCGAACATCTTTGGCATTACAATGATAACGATCGTGCAAGTGGGAgtagtagtggtggtggtaataGTAATACTGCTAATAGTGCTAGTGGTCCTTCAAGTGAATCATTAGATAtcggtaataataattttgaagaaaCAAAAGGAACAATATCAACATCTGATTTATCAAAGGCAACAACAGAAACAACAACAGCGACGACAACAACAACTCCaacctcatcatcatcaacatcaacatcaaatcatgatgatgataattcaacaaacaataatacaacaaatttaaatcCAAATACAAATTCACCagattttctatcaaatttgtGCAATATTGCTGATCATagattatataaaatagtaaaatggtGTAAAAGTTTgccattatttaaaaatatatcaattgatgatcaaatattattacttattAATTCATGgtgtgaattattattattttcatgttgtTTTCGTAGTATGACAACACCTGGTGAAATACGTGTATCATTGGGTAAATCAATAACACTTGAACAAGCAAGACAATTGGGTTTAGCAACTTGTATTGAAAGAATGCTTGCTTTTACTGATAATTTAAGAAGACTAAAAGTTGATCAATATGAATATGTTGCCATGAAAgTAATTGTACTATTGACATCAGATACAAGTGAACTTAAAGAACCAGAAAAAGTACGTTCATCACAAGAAAAAGCACTTCAAGCATTACAACAATATACAATAGGAAAATTTCCAGATATGCCAGCTAAATttggtgaattattattacgaaTACCAGATCTTCAACGTACTTGTCAAGCTGGTAAAGAATTATTAACACAAAAACGAGCTGAAGGTGAAGGttgttcttttaatttattaatggaaCTTCTTCGAGGTGATCATTaa
Protein Sequence
MSERNGPTEGSGWWSPAQIWKTSSSTSSSITTSTTVASTSVITSRLSDTGKNVSVTTINVPQAQDVHDVKNIKYLGGQNGVTVSVVSSCGSPASTLTDHQLPENSSVDDDVEDSDGEVSKIDFRGVNLRTKKKRDSESECGITTTNNNNNVHHQQQQQQPERPMSWEGELSDHEMSSNTIMNQDHEETSMEGVQACSPSPVTPETQKYPIKPEPDYCSSPGLSSHEAVMPLSHSQHLQNHHHHHHIQNQQQQQHHHHHQLQQQQQHQHHHQQQQLHSQRDDQNQQNDLPLIVDKLLDNYNNTTPNHSPILNPRHHLTKHGHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGSGSPIPSSTLSRQSFNNSTSSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPIQQPRHAQHHHQHHHHHQQHHQHHHHQQQQQQQQHHQQSQQQYHQQISQTGSPLHLPISSPSSSSSSTITNTYNNNSNNNQTDLSEQHDDQEDCKVPLASSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAICPVTVGTRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTIPANLIGNNNNNNNTNSLSGDKMTGGNCSPAPSGNEHYHSSGGSGGGGGGRHHWNNLNKLPVPQLLQEIMDVEHLWHYNDNDRASGSSSGGGNSNTANSASGPSSESLDIGNNNFEETKGTISTSDLSKATTETTTATTTTTPTSSSSTSTSNHDDDNSTNNNTTNLNPNTNSPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQILLLINSWCELLLFSCCFRSMTTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTDNLRRLKVDQYEYVAMKVIVLLTSDTSELKEPEKVRSSQEKALQALQQYTIGKFPDMPAKFGELLLRIPDLQRTCQAGKELLTQKRAEGEGCSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00131315;
90% Identity
iTF_00131315;
80% Identity
iTF_00132676;