Basic Information

Insect: Aphidius ervi
Gene Symbol: -
Assembly: GCA_015776835.1
Location: MKYW01000005.1:666777-669882[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.6 3.5e+02 1.9 1.7 2 18 196 209 196 215 0.72

2 12 0.027 2.6 8.6 2.8 1 21 343 363 343 364 0.94

3 12 2.9e-05 0.0028 17.9 0.6 2 23 369 390 368 390 0.97

4 12 4.8e-06 0.00047 20.4 2.7 1 23 399 421 399 421 0.99

5 12 0.066 6.5 7.4 0.2 1 23 440 461 440 461 0.77

6 12 0.00054 0.053 13.9 0.2 2 23 467 488 466 488 0.96

7 12 2.1e-05 0.0021 18.4 3.2 1 23 539 561 539 561 0.99

8 12 4.6e-06 0.00045 20.4 4.1 1 23 567 589 567 589 0.97

9 12 0.00023 0.023 15.1 2.8 1 23 595 617 595 617 0.98

10 12 7.8e-06 0.00076 19.7 2.1 1 23 623 645 623 645 0.98

11 12 0.00056 0.054 13.9 0.7 1 23 649 671 649 671 0.98

12 12 5.7e-06 0.00056 20.1 0.6 1 23 679 701 679 701 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.6	3.5e+02	1.9	1.7	2	18	196	209	196	215	0.72
2	12	0.027	2.6	8.6	2.8	1	21	343	363	343	364	0.94
3	12	2.9e-05	0.0028	17.9	0.6	2	23	369	390	368	390	0.97
4	12	4.8e-06	0.00047	20.4	2.7	1	23	399	421	399	421	0.99
5	12	0.066	6.5	7.4	0.2	1	23	440	461	440	461	0.77
6	12	0.00054	0.053	13.9	0.2	2	23	467	488	466	488	0.96
7	12	2.1e-05	0.0021	18.4	3.2	1	23	539	561	539	561	0.99
8	12	4.6e-06	0.00045	20.4	4.1	1	23	567	589	567	589	0.97
9	12	0.00023	0.023	15.1	2.8	1	23	595	617	595	617	0.98
10	12	7.8e-06	0.00076	19.7	2.1	1	23	623	645	623	645	0.98
11	12	0.00056	0.054	13.9	0.7	1	23	649	671	649	671	0.98
12	12	5.7e-06	0.00056	20.1	0.6	1	23	679	701	679	701	0.98

Sequence Information

Coding Sequence: ATGTGGCCTTTTCGTGATACAGAATGTTTTGATAATTTTATCTCGAGGTCTGAAACAGTTGCTGATCTTATCCAACATCTTGATGAATGTATACAAGTAGATGACGTTACATTTGGTGGTGATTCTTGTGAGATAAATGACAATGAAAATGTATTAATGGATCATCAAAATGTAGAAGACTTGTCTGATGATTTTTTGGTGAATGATGATGGTATTATGACAATAAATGGTTCACAAGAAATTCAAGCTGATGATAATGAACAATTTGAAATTGATCAAGTAAACTGTGATATTAAAAATGAATATTTAGAGTTAAATGAAATAACAGATAATGATAATTTGGAAAATAATGATGATACAAATGATGAATTTTTATATCAAACAATTGAAGATAATTTAGAAGAATCACAAATATTATATGTACAAAATACAGATGATGTTATTAAAGATGACAGTATGATTGACACATTTCAAGATGATACAATTGAGTATATTGATACTGAGCAAAATTTTATTGAAATTGATCAACAAGAAATAATTGAACAAATGCCAAATGAAGATTTAGTTGATACAGATATGTATAATTATTGTAATGGTTGTAAAATAAGTTTTGAATCATTTGAAGAACATATGGCTGAATGTCATCCAGATTTATCAGCTACACAAATTAAAAATGATGATAATGATGAAGATATATGTGAAGAATTTGAAACAATTATACCTGAAGAAACACCAGTACCATTAACAATTAAACCACAACGTCGTTCAGCAATGCAAACACTTCGTGTTGAACATTGTACTGATGAAGAAGGCAGAAGTTACATGAGAAAAGTTGTACAAATTGAACCATTTTGGGATCGTACAAATACATCAACAAATGAAACAAAACCAACATCAATGATTGAAAAATTTTTTTCATCTACTAAAAATGCTATAAATAATAATAATAATAAAATACGTGGTAATAATCAAGTTATTGATACATCAGAAACATTACCAGGTGATGAAACAAAACTTCAAAGACCATATCGTTGTCAGCAATGTTTAAAATTATTTACTCATTCTGGTGAATTTCGTTTACATGTTTGTGTAAATGGTAAAAATCAATGTAAATTATGTGATAAAGCATTTGCAACAATAAAAGCATTACAAACACATTTAAAATATCATATTGATTGTAAAAAAAATGAAATATTTAAATGTACAATATGTGGTACTGAATTTACATCACATAAAAGTTTACGTTTACATGCAAGAATGCATGCACCAGTACGTTCAAGACGTATTGAAGCACCAGAAGGTGAATCAAAAGATTGTTTTACATGTAATGAATGTGGTAAAATATTATCAGAATCATATAAAGATGCACATATGGCATTACATACAAGTGATGCAGTAACATGTGAAATATGTAATCGTAAATTTGGTTCAACTGAAAGTCTTGAAATGCATCGTGCTGTACATCAAGAATTAGGTATAACTAAAAATCAATTAACAAATGAAACAGATATACCACAACCTGATCCTTTATCACTTTCTCCTGATTCCCCAGTTCCACGTAATTCATCACCAACAAAAGTAACAAGTTCTGATCCTCCTGATCCTTCAAAACCTTATCAATGTCAGTATTGTCCAAAACGTTTTAGAAGACCACATGAAAAAGTTAAACATGAAAGAATTCATACTGGTGAAAAACCCCATATTTGTGAGGTTTGTGGAAAAACATTTCGTGTATCATTTTGTTTGACTCTACATATGCGTACACATACTGGTGTACGTCCATATGAATGTAAAGTTTGTAATAAAAAATTTAAAGCATCATCAGTTTATAATCATCATGTATTAACACATGGTGATGCACGTGCATATAAATGTGATTATTGTACAAAAACATTTAAAACACGTGTACAACTTGCTGGACATAAAAATAGTCATACAAAACCATTTCATTGTACTGAATGTTCAAGACCATTTGCATCACTTTATGCTGCACGTAATCATATTGAAACACATAAAAAAGATAATAATCTTAAATTTACTTGTCATATTTGTGGTGCATCATATGGACGTGCATTTGCTCTTAATGATCACATGAAAAGTCATGCTGATAATGATGATAATGCTGATGATGAATTACAACAAACATTACAACTACCAGAAGCTGCTAGAGAAGAAGAAGTACAAGATGATTATATTATGAATCAAGAAATTACTGAAGAAGAACTTATCAATGAATCTTCAGTTATTATTGAATAA
Protein Sequence: MWPFRDTECFDNFISRSETVADLIQHLDECIQVDDVTFGGDSCEINDNENVLMDHQNVEDLSDDFLVNDDGIMTINGSQEIQADDNEQFEIDQVNCDIKNEYLELNEITDNDNLENNDDTNDEFLYQTIEDNLEESQILYVQNTDDVIKDDSMIDTFQDDTIEYIDTEQNFIEIDQQEIIEQMPNEDLVDTDMYNYCNGCKISFESFEEHMAECHPDLSATQIKNDDNDEDICEEFETIIPEETPVPLTIKPQRRSAMQTLRVEHCTDEEGRSYMRKVVQIEPFWDRTNTSTNETKPTSMIEKFFSSTKNAINNNNNKIRGNNQVIDTSETLPGDETKLQRPYRCQQCLKLFTHSGEFRLHVCVNGKNQCKLCDKAFATIKALQTHLKYHIDCKKNEIFKCTICGTEFTSHKSLRLHARMHAPVRSRRIEAPEGESKDCFTCNECGKILSESYKDAHMALHTSDAVTCEICNRKFGSTESLEMHRAVHQELGITKNQLTNETDIPQPDPLSLSPDSPVPRNSSPTKVTSSDPPDPSKPYQCQYCPKRFRRPHEKVKHERIHTGEKPHICEVCGKTFRVSFCLTLHMRTHTGVRPYECKVCNKKFKASSVYNHHVLTHGDARAYKCDYCTKTFKTRVQLAGHKNSHTKPFHCTECSRPFASLYAARNHIETHKKDNNLKFTCHICGASYGRAFALNDHMKSHADNDDNADDELQQTLQLPEAAREEEVQDDYIMNQEITEEELINESSVIIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00132772; iTF_00131475;
90% Identity: iTF_00131475; iTF_00132772;
80% Identity: -