Aerv015637.1
Basic Information
- Insect
- Aphidius ervi
- Gene Symbol
- -
- Assembly
- GCA_015776835.1
- Location
- MKYW01000042.1:475200-479908[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.00017 0.016 15.5 1.6 1 23 283 305 283 305 0.98 2 17 0.017 1.7 9.2 0.8 2 23 339 360 338 360 0.96 3 17 1.1 1e+02 3.6 0.0 9 20 451 462 449 464 0.88 4 17 0.0086 0.85 10.1 1.9 1 23 553 575 553 575 0.97 5 17 0.00036 0.035 14.5 0.4 1 21 582 602 582 606 0.92 6 17 0.00051 0.05 14.0 3.8 2 23 688 709 687 709 0.96 7 17 3.1e-05 0.003 17.8 3.8 1 23 777 799 777 799 0.97 8 17 0.00016 0.015 15.6 0.6 1 20 804 823 804 825 0.95 9 17 0.12 12 6.5 0.3 2 23 836 857 836 857 0.97 10 17 2.2e-05 0.0022 18.3 0.6 2 23 896 917 895 917 0.97 11 17 2e-05 0.002 18.4 1.6 1 23 922 944 922 944 0.95 12 17 0.00048 0.047 14.1 2.7 1 23 950 972 950 972 0.98 13 17 6.1e-06 0.00059 20.1 0.4 1 23 990 1012 990 1012 0.95 14 17 1.5e-06 0.00015 22.0 0.3 1 23 1018 1040 1018 1040 0.98 15 17 1e-05 0.001 19.3 0.2 1 23 1046 1068 1046 1068 0.98 16 17 5e-05 0.0049 17.2 2.0 1 23 1074 1096 1074 1096 0.94 17 17 0.0082 0.8 10.2 0.4 1 20 1102 1121 1102 1123 0.89
Sequence Information
- Coding Sequence
- ATGGACGCCGTTAGTATTGACACAAATGAACCATCACAAACTGCTGATGATGAGCCTGTTGATCAACATGATGATATATGTCGTATATGTTTAACAACAAGTGTTATAATGAGAGATTTATTTATTGAAGATGATGTTGTATCATTATCAACAAAATTAATGGCTTGTACAAATATTAAAATGATACCAGATGATGGTTTACCAACTCAATTATGTTGTGATTGTACTGATAAACTTGAAACAGCATATGAATTAAAATTGCAAGCAGAACATGCTGATAGTACTTTGAGAAGTAAACTTGACAAATGGTCAGTTAAAGATGAATTTTTTTTTAATGAAGTTGAAGTACATCTTGATAATGAAAGATCTGTTGATAAAAATTATGAAAATAATAAAAAACAACAAGAACAACAACATCAACAAATTGATTGTCATGATAAAGATAATTTAATGGAAGTACAAGAAGAGCTTGGTGATAATCATGATCATCATGATGATGGTAGTAATACATGTAAAACCGAAAATTATAATATTCCTGAGAGTATAACAATTGGTGAACATAATTATATGGTACAACAAGATTACTCATTGACAAATGAAGAACAAGATAAAATTTTAGAACAAGATAGTAATCATGATACAACAGATTATACAGTTATTATTAATGAAAATGATATGGATCATCAAAATGAAATGATTGATGATGAAAAAAATGCAAAAAATCCTTTACAATTAAATAATTCTGGTTCTGATAATAATGAAACAAATTATTTTGAAAATTTAAGTTTAAGTTGTAGATTAAAACAAGCAAATATTGATAAAAAAAAAGATATTAATAAAATATTTTTCATGTGTTTTATTTGTGATAAACAATTTACATCAAAAAATATATTAAAAGAACATATGAATTCACATGATGAAATTCGTAATAAATTACCAGAAAAAATTATAAAATCACCATTACAACCACCATTACAACCATTAAAATCTACATCATCTGGTAAAAAATTAAATAAATGTCCATATTGTGGTAAAGAATATTTATATGTTATATCATTTAAAAAACATTTAAAACAACATGAAAATTCTGATGATGTTATTGGACAAACAAGTATTTCACAATTATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGTACATACACTGGTACATTAGAAGGAGATCAAGTTAATGCTGAAGAAGAAAAGTCAACAAATATTATAACAACACCAACAACAACTGATCAAGCTACATGTTCAACAAATGACAATTTAAATAAACATATAATTCTTAATGAAACACAACTGAATATAAAAATGAATACTTCAGATAATGATTCTGATTTGTTGAAAAATTCAACACAATTTAATGATGGTAATAATGAATTTATTGAAGATAATTTACAAAAAGAATTTAATAAAAATAATGAAGGACAATTGGAAAATTTATTAACAACAAATGATAATAGCCATGAAGATGGTGATGATGATGATAATATAAATAAAAAAATAAATAAACAAGAGACAATCATTGAATCACGTTTACCAAAAATAAAATATAGATGTAAAATATGTTTACAAGAATTTCATAAAAAAGATGAATTAAGTAGTCATGCAAATGAACATGCTGCATTAAAAAATATATATAAATGTACAGAGTGTGATAAAAATTTTGGTAATGAATTGACATTGAGAAATCATTTAATAGCAACAAATCATCGTACAATAATACAAGGTAATGAATATGATCCAAATAAAAGAATAAAAAGAGTTGCAGCAAAAGCAGCACAAAAAATAATTGATAAAATAAAAATAGAAAATGATGATGATGATATTGATTATAATGATAAAAAACCAATAACAACAACAACAACAACAACAACAAATTTATGTTCATCTGAAAAATTATTACTTGCAATAAAAAATAAAACATATAATTTTGGTAATAATAAAAGAGATATTGAATGTGAAAGTTGTGGTAAAAAATGTAGTTCAAAACAATATTTAATAAAACACATGGAACATCATGTTAGAGAAGAAAAATCAATGCAACAAGATAATGATAATAAAAAAGTTAAAAAAATAATTGATACAAATACAAAAGAACAAATTTCTAAAAAAACAAATTGGAATACATTTAATATGCAAAATGATTTAATGAATACAGATGATGATGAAGATGATGATGATGATGAATTTGATAATTGTATGAATTGGCCAATGGATAATCATGAATGTCCAACATGTAAAAAACGTTATAGTACTAAAAAATCATTATTACGTCATCAATTATTACATGATGATCCAAATTATGAGTGTGATATATGTAATGTAAAATTTTATAGAAAAGATAAATTGAAAGCACATTATGATAAATGTTCAGAAAAAAATCCAGATCAAGTTAGAAAATGTAATATATGTGGTGATATATTTGAAAATAATGAAATTCTACGTGAACATAGATCAAAACATGTTGATGAAGGTATATTAACTGAAGAAGATTTACGTGAATTAGAACCAACATCAGATGATAAAACAAATAATGAAAAAATACCAAGAAAAAGACGTACAGATATTGTTGGTTTAGAATGTACTGAATGTAATAAACAATATACATCAAGAAAAGGTTTATTACGTCATATACAAGTACATGAAGGTAAAAAATATTTATGTGATATATGTCCTAAAAAATTTTATCGTCGTGAACATTTAAAAATTCATGTTGCAAAACATAATATGATTAAACCATATAAATGTTCACGTTGTTCAAAACGTTTTATTAAAGAAGAACAATTATCACAACATTTAACAAAACATGAAAGAACAGTTAAAAATAAAATTAAAGATACTGATAGTAATTCAAAAAGATTTTTATGTGAAATATGTTCAAAAAGTTTTACACAATCAACAACACTTGTTGCACATTTACGTGCACATAATGGTATTAAACCATTTGTATGTGAAGTATGTGCACGTCCATTTACAACAAATGCATATTTAAAAATGCATATGAGAACTCATACAAATGAAAAACCATATACATGTGAATATTGTTCACGTGCATTTGCAAGAGCAGATACACTTGCTAATCATTTAACATCACATACTGGTGAGGCTAAATATTTATGTAAATATTGTCCAAAAAAATTCAGACGTTTAAAATCATTAAAAGAACATGTATTTATACATACTGGACAACGACCATATGCATGTCCAACATGTGATAGAAGATTTAATAATAATGGAAGTAGATATGCACATAGTAAAAGATGTAAACAAAATTTAATGCAAAGTGTTGCTGCTGCACAAGAACCAAATCAAACAAATATTATTGAAATTCAAACACTTGAATTACCACAACAACACCAACAACAACAACAACTTCAACAACATCAACAAGATCAACAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCAGCTTCATAATAATTCACTTCAACAACAAACACAACAAATACAAGTACAAATACAACAAGAACCACATCCAACACATATACATTGTACAGTTAATAATACAATGCAAGTTGTACAAAATAAAGGCCTTAAAACAATAACACTAAGGCCTGATTTAGTTACATCACATCAATTAATACAACAAGATAATAATATTTCACTTCCATATTTACCACTTACTATATTACCACTTACTGTTGCACTTACTGATGATGATGAAGTTATTCTACCAGAAGGTGCAAAATTATTTACAACAACGCAGTAA
- Protein Sequence
- MDAVSIDTNEPSQTADDEPVDQHDDICRICLTTSVIMRDLFIEDDVVSLSTKLMACTNIKMIPDDGLPTQLCCDCTDKLETAYELKLQAEHADSTLRSKLDKWSVKDEFFFNEVEVHLDNERSVDKNYENNKKQQEQQHQQIDCHDKDNLMEVQEELGDNHDHHDDGSNTCKTENYNIPESITIGEHNYMVQQDYSLTNEEQDKILEQDSNHDTTDYTVIINENDMDHQNEMIDDEKNAKNPLQLNNSGSDNNETNYFENLSLSCRLKQANIDKKKDINKIFFMCFICDKQFTSKNILKEHMNSHDEIRNKLPEKIIKSPLQPPLQPLKSTSSGKKLNKCPYCGKEYLYVISFKKHLKQHENSDDVIGQTSISQLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTYTGTLEGDQVNAEEEKSTNIITTPTTTDQATCSTNDNLNKHIILNETQLNIKMNTSDNDSDLLKNSTQFNDGNNEFIEDNLQKEFNKNNEGQLENLLTTNDNSHEDGDDDDNINKKINKQETIIESRLPKIKYRCKICLQEFHKKDELSSHANEHAALKNIYKCTECDKNFGNELTLRNHLIATNHRTIIQGNEYDPNKRIKRVAAKAAQKIIDKIKIENDDDDIDYNDKKPITTTTTTTTNLCSSEKLLLAIKNKTYNFGNNKRDIECESCGKKCSSKQYLIKHMEHHVREEKSMQQDNDNKKVKKIIDTNTKEQISKKTNWNTFNMQNDLMNTDDDEDDDDDEFDNCMNWPMDNHECPTCKKRYSTKKSLLRHQLLHDDPNYECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDIFENNEILREHRSKHVDEGILTEEDLRELEPTSDDKTNNEKIPRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCSRCSKRFIKEEQLSQHLTKHERTVKNKIKDTDSNSKRFLCEICSKSFTQSTTLVAHLRAHNGIKPFVCEVCARPFTTNAYLKMHMRTHTNEKPYTCEYCSRAFARADTLANHLTSHTGEAKYLCKYCPKKFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNLMQSVAAAQEPNQTNIIEIQTLELPQQHQQQQQLQQHQQDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQLHNNSLQQQTQQIQVQIQQEPHPTHIHCTVNNTMQVVQNKGLKTITLRPDLVTSHQLIQQDNNISLPYLPLTILPLTVALTDDDEVILPEGAKLFTTTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00131460;
- 90% Identity
- -
- 80% Identity
- -