Acol000730.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphidius colemani
Gene Symbol
TFIP11
Assembly
GCA_030523065.1
Location
JAPYYR010000116.1:34809-37840[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-91 1.1e-87 294.1 10.7 1 275 408 678 408 678 0.98

Sequence Information

Coding Sequence
atgtCTGACGACGAGGTTGAAGGATTTGAAATAACTGACTGGGATTTGGAAAATGAATTCAATCCAAATCGAGTCAGAAGAAGAATGACAAAAGAACAACAAATGATTGGTGTCTTTGCGGATGACAGTGATGAAGATAGAGCACCAAAAGCATCATTCaaaagatttgaaaaaaagggGCCAAAAGGCTATCAAGGACCAGTTAGATTTGTGTCGGCTGGAATTCAACAAGccggtaaaaaaaaagaagaagctaaaaaagatgatgatgacaacgATAATGACGAtaatgatgaggatgatgatgatacagcAAGAGCTAGACGTGGTGATGCTGATTACGTACCAAATAGTTCAAGTGAATCAGAACATGATTCCAATTCAAGaccatcaaatataaaaaaatctttttcacTAAATACAGATAGTGATATTGCGGGTTTACGTAAAAAACGTGCGCCAATGAGTTCATCAATAATGAAAACTGGTATGGGTGGTTGGGAAACATATACAAAAGGTATTGCTAGTCAAATATTATTAGGTATGGGATATGAGCCTGGTAAAGGACTTGGTAAAAATCAACAAGGTATAACAGCACCAGTTGAAGCACATTTACGTAAAGGTCGAGGTGCCATTGGTGCTTATggaccagaaaaaaaaactaaattacaagaacaaaaaaaagatgaagatttagaagaagaaaaagaatttaaagttaaattatcCCAATGGCGTAAAGGTGGTGGTGAtgttaatagtaataaaaaaaaaattaaatatcattatagAAGTGTTGATCAAGTATTAGAAGATGGTAAATTACGTCCAAATATTAGAGCAGCACCTGGTAGTGAATTAAGTCGTGTTAAAGTTATTGATATGACTGGTCCTGAACAAAGAGTTTTAAGTGGTTATCATGCTATTGCTGGACAAAAATATCCTGATGAATTAATAACTGAAGTTGACAATAGACgttcaacaacaaatttttcacTTCCTGAATTAcaacataatttaaatttaattgttgatatgtgtgaacaaaatattattcaaaatgatagaaaaaaacgtTATCTCAGTGATAGAATTGTATCATTAGAAGCTGAACAAAAAAGTACTGCTAAAATTGTTGATCaccatgaaaaattaattgacacaTTAGATAatgtattatcaattgttgatgaacTAATGAATAATAACGAGGACATGTCATTAAAAGAAATAGCTGATggcttcaaaaaaattaaagataaatattatgatgaatataaaataaatgatttaggTGAATTAGCCAGTAGTCTTGTTTcagctaaaattaaaaacaatctTGCAACATGGAATCCACTTGTTGATACAAAATATCtattaaatgttattaaagAATGGAAAGATATTTTAGACActggtaataatattaatccaaAAAACGGAATGAATCCATATGACAGATTAATTTGGAATGCCTGGATGCCATCAGTAAGAGGTGCAGTACAACAATGGGCATGCAGAGAACCAAAtggaattattgatttgattgaaaattggATGCCTTTATTGCCTTCTTGGATTTTGGATAATATCCTTGAACTTCTTATTTTACCAAAGTTAACACTTGCTGTTGAAGAATGGAATCCTCTTACTGATACAGTGCCTATTCATACTTGGATTCATCCATGGTTACCACTTTTAggtAAACGTATGGACACATTGATATATCCTATTATAAGAAGAAAATTAGGATCAGCTTTAGGTAAATGGTATCCATCTGATAGATCAGCAAGACTAATTCTACAACCATGGGCACAAGTATTTTCAAAAGGTGATATGGATgcatttttagttaaaaatatactacCAAAACTTGAAAATGCATTATCACAATTTGACATTAATTCACATGAACAACATATGAAATTGATGGAATTGTGGAGAGTTGTATATGAATGGTCAACTCTTCTTCCAAATCATACAATGGTTGGTTTATtggatgaatattttttcccaAATTGGCTAAGAACCTTAGCAATGTGGCTCAATCTTTCACCAAATTATGAAGACGTTTCTAAATGGTATACTGGCTGGAAAAACGAATGTGATAAACTATTGGCTGAACCAACAATCAGagaatGGTTTAAAAAGGCGTTAGATTTGATGAACCGTGCTCTAAGATTTAATGACTCATTAGATTTACCAaatgcaaatattttaaatcatcaaccTAGTGCTATGGAAAATGTTTATGAGGAACGTTCACAAGCAACTATGGCACAACCGCAAATtgagcgACTTGCTGAAGTTATGAGATTGACCAAACAAATGCCAGAAGATTTTAAAGATCTCGTTCAATTGAAATTAGAAGAAAGAGGAATTCTTTTCGTTCCAATAACAAATCAATACAGAGACTCAAAACAAGTGTACAGAGTTGGTGAAACACTTAAAGTATATATCAATGGTTCTGTTCTTTATGTTTGTCACAatggtaataattttaatccatCAACATTACAAAATTTACTTGACATTGCTGAGGGTGAATCGAAAACTCCAATATttcgtaataaaattttttga
Protein Sequence
MSDDEVEGFEITDWDLENEFNPNRVRRRMTKEQQMIGVFADDSDEDRAPKASFKRFEKKGPKGYQGPVRFVSAGIQQAGKKKEEAKKDDDDNDNDDNDEDDDDTARARRGDADYVPNSSSESEHDSNSRPSNIKKSFSLNTDSDIAGLRKKRAPMSSSIMKTGMGGWETYTKGIASQILLGMGYEPGKGLGKNQQGITAPVEAHLRKGRGAIGAYGPEKKTKLQEQKKDEDLEEEKEFKVKLSQWRKGGGDVNSNKKKIKYHYRSVDQVLEDGKLRPNIRAAPGSELSRVKVIDMTGPEQRVLSGYHAIAGQKYPDELITEVDNRRSTTNFSLPELQHNLNLIVDMCEQNIIQNDRKKRYLSDRIVSLEAEQKSTAKIVDHHEKLIDTLDNVLSIVDELMNNNEDMSLKEIADGFKKIKDKYYDEYKINDLGELASSLVSAKIKNNLATWNPLVDTKYLLNVIKEWKDILDTGNNINPKNGMNPYDRLIWNAWMPSVRGAVQQWACREPNGIIDLIENWMPLLPSWILDNILELLILPKLTLAVEEWNPLTDTVPIHTWIHPWLPLLGKRMDTLIYPIIRRKLGSALGKWYPSDRSARLILQPWAQVFSKGDMDAFLVKNILPKLENALSQFDINSHEQHMKLMELWRVVYEWSTLLPNHTMVGLLDEYFFPNWLRTLAMWLNLSPNYEDVSKWYTGWKNECDKLLAEPTIREWFKKALDLMNRALRFNDSLDLPNANILNHQPSAMENVYEERSQATMAQPQIERLAEVMRLTKQMPEDFKDLVQLKLEERGILFVPITNQYRDSKQVYRVGETLKVYINGSVLYVCHNGNNFNPSTLQNLLDIAEGESKTPIFRNKIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00131952; iTF_00132606;
90% Identity
iTF_00131952;
80% Identity
-