Acol004749.1
Basic Information
- Insect
- Aphidius colemani
- Gene Symbol
- Relb
- Assembly
- GCA_030523065.1
- Location
- JAPYYR010000937.1:12775-14532[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-44 6.5e-41 140.0 2.4 2 165 17 188 16 191 0.93 2 2 3.6 7.4e+03 -3.4 0.1 115 135 366 386 347 407 0.50
Sequence Information
- Coding Sequence
- ATGAGTGTTGAAAAAGATATAAAgccaattattaaaaaggCATATTGTGAAATAATTGAAGAGCCAAAAAGTTTAGTAAGATTCAGATACAAATGTGAAGGATCAGCTGCTGCTATTCAAGGAGTAAATAGtacacatgaaaaaaaaacatatccaacaattaaaataaataactgtaatgattataaaaaaggCGTTGTGTTGATATCATgtgtaaataaagaaaaaattaatggtaaATATTCTGTTCATCCACACAAAATTGTGAGCAAAGATTCTCAAGAAGATGGTACTGGCATACGTGTGGTTgattttgcaataaataaaaatacaattatcattaaacTTGGTGGCTTGGGTATACAAAATACCAGAAGAagagatatcaaaaaaataattgaacaacGTGAGAAGATGCAATTTGATCCATACAAAGCTGGtttcaatcataaaaattcactGAGTAAAATTGATGTAACAGCTGTTAGATTTTGTTTTCAAGTGATATtaacaaatgatgatgaaaaaaaaacagttgtaCTTGATCCAATCGTCAGTCATGTAATGAGTAGTATTCttacaAACAATTtacgaatttataaattgaatcgTTACTCAGCTCCAGCTAATGGTGGAACAGAAATAACATTACTGTGTGATaaagtatcaaaaaaagatataaaagtaCTATTTTATCAaaccgataataataataaaattatatggaaACGTTATGCTGAAATTATTGGTGTTCATAGACAAATTGgaataacatttaaaacacCAAAATATAGTGGGCAAATATCTGAGGTAGTTAAAGGATTTGTTCAGCTTGTAAAACCATCAGATGGTCAATCAAGTCAAccacatgaattttttataattccaaataatatcaaccgtcataaaagaaaatgtaaattttcagAAACACATAGACTATTCAAGAAAATACGACTACAAAATAATtctgatgataatttaaattcttcaaatatttctgaagcaaatgatttttcaattcatccaAGTGATTTTCCATCAATACCAAATGAACAATACagtgTAAATAATATGACACAGCAACAAGTAGTCCAACATCAGTATGATCAgcataatttttcatctcaacAACAATTGGGACAAAATCAGTATGACCAATTTAACTATTCAACTTGCTTTTACAATTCCCATATGATGATGGAccatcaaaatgaaaattatccaTACAATAGTCTTGGTGGATATGTTGAACAAGATTTTAGTCAAATAAATCCAGGTGTACACAATCAGTTTGATATGTCAAATCagaatgatgaaaattcaacaGATCATATTCTTAAGATCATCAATGAATTGTTACCTGAAATGAATCGTCAAGAGTTGAATGAAGTAACTgatgaaacaacaacaatacaatCAAtctcatcctcatcatcatcaggtGATTATCCAAATGATTTACCAATTCTAATTGGAAATTCATTCAATAGAAATCTTGGAGATGtttaa
- Protein Sequence
- MSVEKDIKPIIKKAYCEIIEEPKSLVRFRYKCEGSAAAIQGVNSTHEKKTYPTIKINNCNDYKKGVVLISCVNKEKINGKYSVHPHKIVSKDSQEDGTGIRVVDFAINKNTIIIKLGGLGIQNTRRRDIKKIIEQREKMQFDPYKAGFNHKNSLSKIDVTAVRFCFQVILTNDDEKKTVVLDPIVSHVMSSILTNNLRIYKLNRYSAPANGGTEITLLCDKVSKKDIKVLFYQTDNNNKIIWKRYAEIIGVHRQIGITFKTPKYSGQISEVVKGFVQLVKPSDGQSSQPHEFFIIPNNINRHKRKCKFSETHRLFKKIRLQNNSDDNLNSSNISEANDFSIHPSDFPSIPNEQYSVNNMTQQQVVQHQYDQHNFSSQQQLGQNQYDQFNYSTCFYNSHMMMDHQNENYPYNSLGGYVEQDFSQINPGVHNQFDMSNQNDENSTDHILKIINELLPEMNRQELNEVTDETTTIQSISSSSSSGDYPNDLPILIGNSFNRNLGDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -