Arud011880.1
Basic Information
- Insect
- Aphaenogaster rudis
- Gene Symbol
- ARID5B
- Assembly
- GCA_003063815.1
- Location
- NJRL01000520.1:158572-177999[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-23 4.6e-20 72.2 0.0 1 89 90 176 90 176 0.95 2 2 3.1 1.1e+04 -2.7 0.0 7 33 533 560 531 561 0.77
Sequence Information
- Coding Sequence
- ATGGCCATTGTGATGAGAATCCAGAATAACAAAGTCGTTTATCTGAATATACCTACGCTGGTAAACGCACCGAAGCTAAAAGGCAGACCACGAAGAAAGCGTAAAAAGCGCAGCGCTTCGCCGGGTGAATCCTCGAACGAGAGCGAAGCCTCAGTGGCGTCGACGTCGAAGAGCACGTCGGCGATCACCAACACCAGCTTGGTGATACCCACGGTCGGGAGGCCGCCCTCGTCCGGGGTACGGCGGAGCGAGAGGAAAACCAGTGCGGAAGAAAAGAAGTTTATCACCGACGTGCAGAGTTTTATGAACTCTCGGGGTACGCCGGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGATCTGTTTCTGTTCTACACGAAAGTGCAAATGCTTGGTGGTTACGATTCCGTCAGTGCTGGCCGCCTTTGGAAGACCATCTACGACGACATCGGTGGCAATACGGGTTCCACTAGTGCGGCAACTATTACACGTAGACACTATGAAAGGTTATTATTACCTTATGAAAGGTATCAGCGAGGCGAAGAGACAAAAGTGAGACTGAATCACGGACGACGTACCAAGAGCATGAGTGCGTCCGACGATTTAGATATCAAGGAGGAACCGAGTGATCTGTATACCTCGGAAACACCTCCGCCTATAGATGCAATTCCTGTTACCACGACACCGCCCTTACAACCAATAATGTCAGCAACAACGACGACTTTACTCTCGAGTGAGAAACCCAAAGCCGAAACCGGCAAGACATCCTCGTTACGTAGCGTGCGAGTGAAGCCAGAACGTCTGAAGTCCCTGAATACAATAATCGCCAATAATGCGATACCTTCCAGCCAGCAAGCTAACCAACTGCCAAGTCCACCGCCATCCTCCAACACGTCTATCTCAACGCCCAATAGCACACCCTCCACAACGCCGACGAATGGTACCAGTAACAATCAGAGCGTCTTGGAGAGGCAGCTCAACAGTCCTTTGATATCCCAACAAGTTCCACCATCGTGTTCGCCACCAGGCTTGCCCGTGACTAGTGTAGCGACAAACGCGTCAACGGTTGTCACTCTAACGCCTCCGCCTGAGAAGGATATGAAGGAAATCAAGTTGGATCCCAAGCAGACGACTCTACTGGCGCAGGGTAAAGAAAATATACCGCTGTTCGGCGGTGAGAAATTTGCGGACAAGACGATAGTACCGCCGGTCTCCAGATCGCCCGAAGTGATCGATCTTGAAAACGAGAGCGACACGAGTCGGGACAAGATAATCATTCCCAGCTTTAAGAAACGCAAGCTCGAGATTCTGCGTGAAGGCGGACTCGAAGTCACCGCCGTCGATCTAGACGCACGACCGAGCGTGATTCAAAGTAACATCGCCATGTCGctgcaacagcagcagcaaccaCCACCCTTGCCGGCTACGATGAAGTCCACTGAAGAGAAGCAGCCATCGATCTCACCGTATCCGCTTCCAGTTACGCCCAACTCCATTCCTAAGTTAATATCCGTCACCGTGACACCCGACATAGGACACATGTTACCGTCGCCGCAGGACCATCAAAATCATCAGCCGCGAATACCAGCGGTCAAACAATTACCGGCTCATCACAACAATAACAACATTAGCATGATGAACAACAATAACGTGATGAACAGTCGGGTGATAAACCTCGGTAGCTCGAATAATGCCGCGTTATTGCAACTATATGCGAACGCGAACGTCGTACCATCAACGATTCCACCTGCGCAACAGGCAAACCATCGCTGTTTTGTTCCACCAAATATTCCAAATGGCAGGTTATTACCGCCGAAAGTGACACAATCAAGGTCGATATTTGTGCACAACGAAAGGACAGTTTACGGGAATCCTAAGGATATTCTTATCTCTCCACCAAAATATCGCTCGGTGCATCCGcatcaacagcagcaacaacgcTCGCAGCATCCGCAAATGAGCTCTAGTAACGACGTCGGACAGGGTGTTCTCGATCTGACGCAAAAGTCTAGCGAGAAACCGACGTTTCCTAGGCCCAGTCTAGAAATAGTCAGAGTACCTGTAGTGCAGAGGCCTAATCCATTAAATCTGGACGTGCGGAATTCACCCGCGGCCAAGGACAAATCGTCGGACAGACCTGCCGCCGACTGTCCGAAGCGAGTACCCTTCCCTGCCTATCAAAACGTAATCGACAGTCGAACTATCGCGTCGAACAATCTCGAGATTACGCTAGTGAATCCCAAACACAAAAACAATCATCACCTAAGTATGCCGTCTCATGTCCAAATACCCAGTCCACCTAATAAAAGCAGTGCGATAGGAACGATAAGTAGTGCGCAAAGGAGGCAACAACAACCGCAGCAGCAAGTGAATGGAAAATATACAGTGAGAAGCGAGCCGGTTTCGCCATACACACCGAGAAAGCCGAGTCATCCCATCATACCGAACGTACCCAATTTGAATCATCTGAGTCATAGTGCAAGTCCGTTTCCTAGAATGCAGGCAACGACGttacagcaacaacaacaaatGAGCATTGATAGGAGGAAAGCGGCTGCAGAGGCCGGCAGGGATCATCAACATCGTAGGATCAGCGAGGGCGAGAAATCGTTGGCAgcgcaacagcagcagcatcagGAATCTAGGCAGAGCGAGGCCGGGCGACGACACAGTTTACCCAGCATACCATCGGGATTCGTGCCGACAGTGCCGCAAAACAACTCTAGCGCCTTTCCGTTGCCGCAACTGCCAAATGCGTCCGGCAAGTTCCTACCAATCCTGGACCCTATGTACTACTCTGCGTTCTATAACGGTTTGTTCCCACCGCCGATTCCGCCCACGGCCGCCGCAGCTGCTGCCGCCGCGACGCCGTTTTTATCGCCGGAATTTAGCGCATATTACAAGGAATTTCTCGCTTCCTCGCAACCAAGACTGACGGGGATGACGGGGCAGCCGCCGCATCAACAGCCGGCCGCCCCAACGTCTAAGTAG
- Protein Sequence
- MAIVMRIQNNKVVYLNIPTLVNAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSTSAITNTSLVIPTVGRPPSSGVRRSERKTSAEEKKFITDVQSFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQMLGGYDSVSAGRLWKTIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEETKVRLNHGRRTKSMSASDDLDIKEEPSDLYTSETPPPIDAIPVTTTPPLQPIMSATTTTLLSSEKPKAETGKTSSLRSVRVKPERLKSLNTIIANNAIPSSQQANQLPSPPPSSNTSISTPNSTPSTTPTNGTSNNQSVLERQLNSPLISQQVPPSCSPPGLPVTSVATNASTVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGGEKFADKTIVPPVSRSPEVIDLENESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDARPSVIQSNIAMSLQQQQQPPPLPATMKSTEEKQPSISPYPLPVTPNSIPKLISVTVTPDIGHMLPSPQDHQNHQPRIPAVKQLPAHHNNNNISMMNNNNVMNSRVINLGSSNNAALLQLYANANVVPSTIPPAQQANHRCFVPPNIPNGRLLPPKVTQSRSIFVHNERTVYGNPKDILISPPKYRSVHPHQQQQQRSQHPQMSSSNDVGQGVLDLTQKSSEKPTFPRPSLEIVRVPVVQRPNPLNLDVRNSPAAKDKSSDRPAADCPKRVPFPAYQNVIDSRTIASNNLEITLVNPKHKNNHHLSMPSHVQIPSPPNKSSAIGTISSAQRRQQQPQQQVNGKYTVRSEPVSPYTPRKPSHPIIPNVPNLNHLSHSASPFPRMQATTLQQQQQMSIDRRKAAAEAGRDHQHRRISEGEKSLAAQQQQHQESRQSEAGRRHSLPSIPSGFVPTVPQNNSSAFPLPQLPNASGKFLPILDPMYYSAFYNGLFPPPIPPTAAAAAAAATPFLSPEFSAYYKEFLASSQPRLTGMTGQPPHQQPAAPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01254583;
- 90% Identity
- iTF_00126486;
- 80% Identity
- iTF_00128748;