Apic006643.1
Basic Information
- Insect
- Aphaenogaster picea
- Gene Symbol
- ARID5B
- Assembly
- GCA_003063865.1
- Location
- NJRM01000138.1:273771-285282[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-23 5.9e-20 71.9 0.0 1 89 279 365 279 365 0.95 2 2 3.8 1.6e+04 -3.2 0.1 7 33 722 749 721 750 0.77
Sequence Information
- Coding Sequence
- ATGGGGCAGGAGGGTATGCGGGGGTTGAGGAGGAATGGTGAGAGAAGAGCGAGAGATGAGACAAAGACGAAGAGGGCGAAAGGGGTTGAGGGGAAGAGAACGAAAGGGAGGATGGCGatagggggagagaaagagagagacgacaGAAGCCGACCGGACGAGGTGCTGACGATTTCAGAAAAGGTAGTCGTCCGCGTGCACGACCTGGTCACATGGCTTTCACCTACGTTAGAATGGTCGTGGGGCCGGGAAGTGTCCTATCCGACGAGCCCGATGTCGTCCCCGGAGACCAGTCCGCTCAGATACGAGATGCCGCAGCCGCAGGTGCTGACGGACCCGGGGATCGACTTCTCGGACGTCGAGAAACAGCAGAAGGAATACGAATGCAATCTGAACTCCTCGAAAAGGTCGGACAGCTTCCAGACGAAGGTGGTGGTACTCTCGTATCCCAGGTACTGTCGCTATCGGGCGCTACTACGTAGACTCGAGGGTGCCGAGCCATCCTGGCTGTGCTCGTCCATCGCGGCCGCGTTAGGGGGTTTCACCGCGACGCCAGGCACCAGGGTGCTCTTCTGCAGGGACACATTTGACTATCCGGACCTCGAGACTCACGAGCTGCTGTGTAATCACTTGGCACCGAAGCTAAAAGGCAGACCACGAAGAAAGCGTAAAAAGCGCAGCGCTTCGCCGGGTGAATCCTCGAACGAGAGCGAAGCCTCAGTGGCGTCGACGTCGAAGAGCACGTCGGCGATCACCAACACCAGCTTGGTGATACCCACGGTCGGGAGGCCGCCCTCGTCCGGGGTACGGCGGAGCGAGAGGAAAACCAGTGCGGAAGAAAAGAAGTTTATCACCGACGTGCAGAGTTTTATGAACTCTCGGGGTACGCCGGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGATCTGTTTCTGTTCTACACGAAAGTGCAAATGCTTGGTGGTTACGATTCCGTCAGTGCTGGCCGCCTTTGGAAGACCATCTACGACGACATCGGTGGCAATACGGGTTCCACTAGTGCGGCAACTATTACACGTAGACACTATGAAAGGTTATTATTACCTTATGAAAGGTATCAGCGAGGTGAAGAAACAAAAGTGAGACTGAATCACGGACGACGTACCAAGAGCATGAGTGCGTCCGACGATTTAGATATCAAGGAGGAACCGAGTGATCTGTATACCTCGGAAACACCTCCGCCTATAGATGCAATTCCTGTTACCACGACACCGCCCTTACAACCAATAATGTCAGCAACAACGACGACTTTACTCTCGAGTGAGAAACCCAAAGCCGAAACCGGCAAGACATCCTCGTTACGTAGCGTGCGAGTGAAGCCAGAACGTCTGAAGTCCCTGAATACAATAATCGCCAATAATGCGATACCTTCCAGCCAGCAAGCTAACCAACTGCCAAGTCCACCGCCATCCTCCAACACGTCTATCTCAACGCCCAATAGCACACCCTCCACAACGCCGACGAATGGTACCAGTAACAATCAGAGCGTCTTGGAGAGGCAGCTCAACAGTCCTTTGATATCCCAACAAGTTCCACCATCGTGTTCGCCACCAGGCTTGCCCGTGACTAGTGTAGCGACAAACGCGTCAACGGTTGTCACTCTAACGCCTCCGCCTGAGAAGGATATGAAGGAAATCAAGTTGGATCCCAAGCAGACGACTCTACTGGCGCAGGGTAAAGAAAATATACCGCTGTTCGGCGGTGAGAAATTTGCGGACAAGACGATAGTACCGCCGGTCTCCAGATCGCCCGAAGTGATCGATCTTGAAAACGAGAGCGACACGAGTCGGGACAAGATAATCATTCCCAGCTTTAAGAAACGCAAGCTCGAGATTCTGCGTGAAGGCGGACTCGAAGTCACCGCCGTCGATCTAGACGCACGACCGAGCGTGATTCAAAGTAACATCGCCATGTCgctgcaacagcagcagcaaccaCCACCCTTGCCGGCTACGATGAAGTCCACTGAAGAGAAGCAGCCATCGATCTCACCGTATCCGCTTCCAGTTACGCCCAACTCCATTCCTAAGTTAATATCCGTCACCGTGACACCCGACATAGGACACATGCTACCGTCGCCGCAGGACCATCAAAATCATCAGCCGCGAATACCAGCGGTCAAACAATTACCGGCTCATCACAACAATAACAACATTAGCATGATGAACAACAATAACGTGATGAACAGTCGGGTGATAAACCTCGGTAGCTCGAATAATGCCGCGCTATTGCAACTATATGCGAACGCGAACGTCGTACCATCAACGATTCCACCTGCGCAACAGGCAAACCATCGCTGTTTTGTTCCACCAAATATTCCAAATGGCAGGTTATTACCGCCGAAAGTGACACAATCAAGGTCGATATTTGTGCACAACGAAAGGACAGTTTACGGGAATCCTAAGGATATTCTTATCTCTCCACCAAAATATCGCTCGGTGCATCCGcatcaacagcagcaacaacgcTCGCAGCATCCGCAAATGAGCTCTAGTAATGACGTCGGACAGGGTGTTCTCGATCTGACGCAAAAGTCTAGCGAGAAACCGACGTTTCCTAGGCCCAGTCTAGAAATAGTCAGAGTACCTGTAGTGCAGAGGCCTAATCCATTAAATCTGGACGTGCGGAATTCACCCGCGGCCAAGGACAAATCGTCGGACAGACCTGCCGCCGACTGTCCGAAGCGAGTACCCTTCCCTGCCTATCAAAACGTAATCGACAGTCGAACTATCGCGTCGAACAATCTCGAGATTACGCTAGTGAATCCCAAACACAAAAACAATCATCACCTAAGTATGCCGTCTCATGTCCAAATACCCAGTCCACCTAATAAAAGCAGTGCGATAGGAACGATAAGTAGTGCGCAAAGGAGGCAACAACAACCGCAGCAGCAAGTGAATGGAAAATATACAGTGAGAAGCGAGCCGGTTTCGCCATACACACCGAGAAAGCCGAGTCATCCCATCATACCGAACGTACCCAATTTGAATCATCTGAGTCATAGTGCAAGTCCGTTTCCTAGAATGCAGGCAACGACGttacagcaacaacaacaaatGAGCATTGATAGGAGGAAAGCGGCTGCAGAGGCCGGCAGGGATCATCAACATCGTAGGATCAGCGAGGGCGAGAAATCTTTGGCAgcgcaacagcagcagcatcagGAATCTAGGCAGAGCGAGGCCGGGCGACGACACAGTTTACCCAGCATACCATCGGGATTCGTGCCGACAGTGCCGCAAAACAACTCTAGCGCCTTTCCGTTGCCGCAACTGCCAAACGCGTCCGGCAAGTTCCTACCAATCCTGGACCCTATGTACTACTCTGCGTTCTATAACGGTTTGTTCCCACCGCCGATTCCGCCCACGGCCGCCGCAGCTGCTGCCGCCGCGACGCCGTTTTTATCGCCGGAATTTAGCGCATATTACAAGGAATTTCTCGCTTCCTCGCAACCAAGACTGACGGGGATGACGGGGCAGCCGCCGCATCAACAGCCGGCCGCCCCAACGTCTAAGTAG
- Protein Sequence
- MGQEGMRGLRRNGERRARDETKTKRAKGVEGKRTKGRMAIGGEKERDDRSRPDEVLTISEKVVVRVHDLVTWLSPTLEWSWGREVSYPTSPMSSPETSPLRYEMPQPQVLTDPGIDFSDVEKQQKEYECNLNSSKRSDSFQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSIAAALGGFTATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSTSAITNTSLVIPTVGRPPSSGVRRSERKTSAEEKKFITDVQSFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQMLGGYDSVSAGRLWKTIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEETKVRLNHGRRTKSMSASDDLDIKEEPSDLYTSETPPPIDAIPVTTTPPLQPIMSATTTTLLSSEKPKAETGKTSSLRSVRVKPERLKSLNTIIANNAIPSSQQANQLPSPPPSSNTSISTPNSTPSTTPTNGTSNNQSVLERQLNSPLISQQVPPSCSPPGLPVTSVATNASTVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGGEKFADKTIVPPVSRSPEVIDLENESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDARPSVIQSNIAMSLQQQQQPPPLPATMKSTEEKQPSISPYPLPVTPNSIPKLISVTVTPDIGHMLPSPQDHQNHQPRIPAVKQLPAHHNNNNISMMNNNNVMNSRVINLGSSNNAALLQLYANANVVPSTIPPAQQANHRCFVPPNIPNGRLLPPKVTQSRSIFVHNERTVYGNPKDILISPPKYRSVHPHQQQQQRSQHPQMSSSNDVGQGVLDLTQKSSEKPTFPRPSLEIVRVPVVQRPNPLNLDVRNSPAAKDKSSDRPAADCPKRVPFPAYQNVIDSRTIASNNLEITLVNPKHKNNHHLSMPSHVQIPSPPNKSSAIGTISSAQRRQQQPQQQVNGKYTVRSEPVSPYTPRKPSHPIIPNVPNLNHLSHSASPFPRMQATTLQQQQQMSIDRRKAAAEAGRDHQHRRISEGEKSLAAQQQQHQESRQSEAGRRHSLPSIPSGFVPTVPQNNSSAFPLPQLPNASGKFLPILDPMYYSAFYNGLFPPPIPPTAAAAAAAATPFLSPEFSAYYKEFLASSQPRLTGMTGQPPHQQPAAPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01254583;
- 90% Identity
- iTF_00126486;
- 80% Identity
- iTF_00129511;