Arud023327.1
Basic Information
- Insect
- Aphaenogaster rudis
- Gene Symbol
- -
- Assembly
- GCA_003063815.1
- Location
- NJRL01004213.1:1-2761[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-09 9.3e-05 22.9 2.5 16 45 29 58 20 75 0.90 2 2 0.21 2.6e+03 -0.9 0.0 18 32 84 98 80 103 0.82
Sequence Information
- Coding Sequence
- ACAAACAAATGTAACGAGACTACGAAAGTAACGGGTTCTAAAGTGATCGATaagaataatacaataaagGAAAATCAATTGCATGTCGAAGATTTAAAGAAACAGatacgCGATTTCAAATCCCAAAATGATTTACTGCGCTCggaaaacaataaattgaagaaaaacgtTAAAGATAAGGAAAACGTCTTAAATGACGTAATGCAATTAAATATGTCCTTGCAGAAACATATAATAGACGATTTTGGCGAACTAAAAGCTATCGTAGtagatttatgcaaaaaaaatgcTGAGAAGGGACATACGAATCCCGGTAAATTACCCGTAGGGTACAGAAGTGCAGAAAAAAATTTGGTACTTTAA
- Protein Sequence
- TNKCNETTKVTGSKVIDKNNTIKENQLHVEDLKKQIRDFKSQNDLLRSENNKLKKNVKDKENVLNDVMQLNMSLQKHIIDDFGELKAIVVDLCKKNAEKGHTNPGKLPVGYRSAEKNLVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -