Apic009217.1
Basic Information
- Insect
- Aphaenogaster picea
- Gene Symbol
- dmd-4
- Assembly
- GCA_003063865.1
- Location
- NJRM01000512.1:46595-47298[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-26 1e-22 80.2 10.7 1 47 24 70 24 70 0.99 2 2 0.27 1.7e+03 -0.6 0.3 28 32 87 91 85 97 0.68
Sequence Information
- Coding Sequence
- ATGCTTCGCGGCAAGGGCAAGAGCAGGTCGGAGAACAACGAGAACAACGAGGGCACGGACGGGAAGCAGCGGAGACCGAAGTGCGCCCGTTGCAGGAATCACGGCCTCATCTCGTGGCTGCGGGGCCACAAACGGGAGTGCCGCTACCGGGAGTGCCTGTGCCCGAAATGCTCCCTGATCGCCGAACGGCAGCGAGTGATGGCCGCGCAGAAAGCGACGATCGACGCGATACGAAATGTCAAATCTACCATCATTCGCGAATGTAAATGTCACGGATCTCGCCCCGTTCACGGCGTCGCTAATTTAATACGCGCGAGCGTGTTATCATCACACCGCGCTTTGAGCGGAGCGTGTGTAGGGAAAATGTGA
- Protein Sequence
- MLRGKGKSRSENNENNEGTDGKQRRPKCARCRNHGLISWLRGHKRECRYRECLCPKCSLIAERQRVMAAQKATIDAIRNVKSTIIRECKCHGSRPVHGVANLIRASVLSSHRALSGACVGKM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -