Apic010098.1
Basic Information
- Insect
- Aphaenogaster picea
- Gene Symbol
- dmrta2
- Assembly
- GCA_003063865.1
- Location
- NJRM01000597.1:88697-93595[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-27 6.6e-24 84.0 10.8 1 47 44 90 44 90 0.99 2 2 1 6.2e+03 -2.4 0.3 28 37 296 305 295 310 0.67
Sequence Information
- Coding Sequence
- ATGTCGCTACCCCGCGGCGTCGGCCTCGGCGTCGACGTCGGCCAACTGATGCAACaccaacaacagcaacagcaacatcACGTGCTGCCGGCCGCGTTCTTTTTGCGCGCCAGTGCCGAGAGGTATCAGCGGACCCCCAAGTGTGCGCGATGTCGTAATCACGGAGTCGTGTCCGCGCTCAAGGGCCACAAGCGCTATTGCCGATGGCGGGATTGCGTGTGTGCCAAGTGCACCCTTATCGCCGAGAGGCAACGCGTCATGGCTGCTCAGGTCGCGCTCAGACGGCAACAGGCCCAGGAAGAAAGCGAAGCGCGCGAGCTGGGTCTGCAATTGCAATACAATGCCGGCAGCTGCAATACTGCCCCCGTTCTACCGGCGGCCGCCGGTGCGACGCCAGCTGGTAGCCCGCCCCCGCACCCGGCGCACGTAGCGAGTCCGGCGGGTCTCGCGATACCCGCGATAcccgcggcggcagcggcggcagcggccGCCGCAGCCGCGCATATCCAGACGCAGCTTCAGCATCAACAGCCTACTGCGGAATGCGGTCTCCTACCGAGAAAGAGGTCCACCCAGGACGAATACCCAGGACGGCAACCCAAGGTCGAGAAGAACGATGCTGTTGTCGCTACGTGCTTTCTGTGGTATATCCATACGGAATACCCGATTATACCACGTAAAGAGCAAGAAAGAAACGGAGGAGGCGAGGAGGAGAGCATGAGATCGGATAGCGATCGCCTTCCAGGCGAATTCAAAGCGTGCAAAAAAGGGCAAACGATGTCGAGAGAGACGAAGAATATTAGGAtaaaaaccACGAAGAGCAGCGAAGATACTATCCCGCCACGAGGAAACCCTTCGGATGCACCTGGTTTCAATTACGATCCCGAATGTACCGCGCGTACCTGCGAGACGAGGGAGATACGTAAGATGTCTCTCTGGCTGATCTTCGAAACAGAGTGCTTACACTAG
- Protein Sequence
- MSLPRGVGLGVDVGQLMQHQQQQQQHHVLPAAFFLRASAERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEESEARELGLQLQYNAGSCNTAPVLPAAAGATPAGSPPPHPAHVASPAGLAIPAIPAAAAAAAAAAAAHIQTQLQHQQPTAECGLLPRKRSTQDEYPGRQPKVEKNDAVVATCFLWYIHTEYPIIPRKEQERNGGGEEESMRSDSDRLPGEFKACKKGQTMSRETKNIRIKTTKSSEDTIPPRGNPSDAPGFNYDPECTARTCETREIRKMSLWLIFETECLH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00885135;
- 90% Identity
- iTF_00129763;
- 80% Identity
- -