Aful004381.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphaenogaster fulva
Gene Symbol
-
Assembly
GCA_003063765.1
Location
NJRO01000296.1:243737-247879[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 3.9 4.6e+02 2.0 1.5 1 14 229 242 229 243 0.87
2 14 0.0073 0.87 10.6 1.5 1 23 316 339 316 339 0.94
3 14 0.92 1.1e+02 4.0 0.7 5 23 346 365 345 365 0.94
4 14 0.53 64 4.7 0.3 2 23 371 392 370 392 0.96
5 14 2.4 2.9e+02 2.6 0.2 1 20 419 436 419 437 0.80
6 14 1.6e-05 0.0019 18.9 0.2 1 22 573 594 573 594 0.96
7 14 6.8e-05 0.0081 17.0 0.1 3 23 602 623 600 623 0.92
8 14 0.19 23 6.1 0.2 3 21 685 703 684 704 0.92
9 14 0.045 5.4 8.1 5.8 1 23 745 768 745 768 0.92
10 14 0.097 12 7.0 3.0 1 20 815 834 815 835 0.95
11 14 0.05 6 7.9 6.2 1 23 843 866 843 866 0.96
12 14 0.011 1.3 10.0 0.5 1 23 941 964 941 964 0.92
13 14 0.28 34 5.6 0.2 1 23 1220 1243 1220 1243 0.96
14 14 0.0025 0.3 12.0 0.4 2 23 1267 1289 1266 1289 0.95

Sequence Information

Coding Sequence
ATGAATAATGCGAATAAATCTTTGGACGATAATGTGATGGATTCTGAAAAATCAAGGATTGAAAAATCATTCAGTAATGAAATGCCGCCAACTAAAAAATTACGGCAACCAACATTAACGGAATACCTTGaactttgcaaaaaaaaacatgatATTAAACTCAgtccaaataaattaaatattatgaaagatGATTTGCCTACGTGTGGTTTACACCATGGTGGACAAATAGAAGGAAATTCAAGGCTTTCAGAAGGACATAATGGACAAATTGATTCTTTACCTACAACATCAGATAATCTCCCAAAACAAATAGCACCTTCTATTCCAGAACAAAGTGTAAAACATGAAATATGTTCTAAAAAGCCATTTGTAAGACTACATGCGGATGTTGAAATGATGAAATCTTTTCTGGACAAACTTTCCGATATGGTTGTCAAGGATAAAGTGACTGAAGAGCGAACAAGTGACATTGTTTCATATGATCGTGAAATACCCTATAGTTTACGATCTTCAAGAGTTATTTCTTCTGTGGAAGCAGATTCAAATTCAGAAATGAGTAACAGCAAAAATGTATCTAAGAAGTCTCGATCTAACATAGAATTCAGTACTAAAAGAGAACAAAACATGATTGATTTAGACAAAGTAAATTCTAAAATAGattggaaaattattatggCTCATTTTAAGTGCAAAGAATGTACAATTTCTTTAACAAGATGTGATGAACGACCAAAAAATTCTTATCAGATTTCTACAATTGAAACCATGGAAAACACTTCTCTTACTACTCAATGCAATTCTATGTTGGTTCAAGAAAGTAATATACAAGACAAAATGATGCTCAAAGATTTAGAAGTTTCTTTGGAACGTTTAACAGCTGTTCCAACTATAGATATAAAGGCAAAGACAACGTCGGACATCGAGAAACACAATAACAATCTATTTTTGTGTAAAGTTTGTAAGCAGagtttttcttcaaaattggcCAAACGCATACATATTAAGTCGTCTCATATAGCATATATGTCAAGCATATGTGATGCACGATATACACTGAAGCATAAATTGCTTCAGCATTATCTGCGCGAACATCTATTTAAACAAGATCAATGTTGTATTTGTTACATGTTATTACCTGATTATGAAGCTCTGAAGCAACACTTAAATATTCATTGTCTGAAGTATATTCAAAGGGAGAACGATAGATGTTCAGTAGATATTGagttaaaatgtaatttgaccaaaaaaatgtttaagtgtCTTCAATGTAACAAATCATCACTATCATCTTTAGTGGCACATCAAAGTTGTTGCACAGTACAAGAAGAGATGAAAGAAAATCAGGAAGATTTTATGAAAGAAGCAAGTGCATACCCAAAGGACAATCTTACGATGCAACACAAGAACACCGATGAAAATATAGTTACACGTGATGAAAGGATTAATCCagatgatttatataaatcttcaaataGCGATTGTGTAAAAGAATCAAACGAATGTCAAATATTGCTTTCTAGTGAAAAAGAACCGAAAATTAATGAAGCTAATCAAaactcttttattaataataacttattaactgaggaaaaaattgaaattgtcaaTAAATCACAAGACTCTAAAAAGCTTTCAGAAAATAATACTGTCACAACCAATAATCAGAATATTGCGAATGCGCAGTTAGATGACATTACAACAAGAACTACGACTTATCCGTGTGATATATGTGGAAAGCAATTTCATAATCCCAAGAAGTTGGAGGTACACATACGCTCTTTTAGCTTTACTACCGATATCTGTCCAATGTGTGGCACTGGATTCAGTTCTAAACGTCTTCTACAGACACATATTACTGCAGCACATGTACCACAGATTTCAAAGACTTACAGTTTCCATTGCGTATTTTGTAACCAAGGGTTTTTAAGAAAACCCGATCTCCGGcctcatatattacatttacatagtCAACAAGTGCTCAACATGCTCGCGCACAATCTTAATGTGATTGAAGAGAAATCTGATAAATCAATTGCTCATATCGCAATATGTAACGTTTGTAATTTGGTATTTGAGACTCATGACCGTTACATAGAACACCggatgtattattacaaaaaccaTACATTTACATGCTCACTCTGTGCGCAAAACTTTCAAGGAATGTACATGTTTCATCATCATAACAAACTTATACATTCTTCAGAGGATAAACGCAagtcatataattatatctgcGACATATGCAACGAGGGATTCAATCATGAGTCACATTTTCATTCGCACAATATGCATGTTCAttcgaatgaaataaatttagttGATGCTGCAAAAGAATCTGAAGAAAAAAGTTGCTTTGATTACTCATCCGACGTCCAAAAGCAGAATAGAAATTTTTCTACGGAccaacaaaaacaaaataaagaatCGTCCAATGAGTATACTTGCCAGATTTGTCAGCTGAAATGTACAAACTTGAATCATATGGAAAAAcacaaagaattttattctaatgATGGCGATTTTAGATGCGACAAGTGTAACAGACGatgcaaaacattttatttacttgATCAACATAGGAAATTAACTCACTCGTGTCATGATATTTATAATGGATATGCGTGTTGCCTTTGTGGTGAAGTTCTGGAAACTGTTTTTGCATTGAAATGTCATGAGAAACATTTTCATTCAAATATTATCGACAATAATGCGGATAATTGGGAGAATTGTGGTCAGACATCATCTTCGAACATTACATACAAGGTAATAGAACATTCAGCTGAATCTAAGGataatacatgtaatataactaaatacaattgtttattttgcaatatgAAGTTTTCCACTGCTAACTCTGTCCAAACACATATTGTTTATGCTCATATGGATGATATGATAGCTAAACGAGCTGCTCTAAAACTTACTCTTCCTATTATTGATAGCGATGACATGCAGAAACAATTTGTTGAAACTGATCAAGTATCATCATTATCGTCATCTGAAGATAATTTAACTCAATTTCTGCGAAGATCAACGATTCAACAATCTAATAATATTCCAAGTAATACTATAGCTAAAAATGGAATGAACGATAAAACTACTATTGAATTACTAAAGAAATTTAACAATGTAgatccaaaaaataaaataaaggaaactTTAGTTCCTGCAGTTCCATATATTAACAAATCTAAagacaatattttgacatgtaGCACTATTGCATCAAATACGGAATCAAAAGTGAATTCCTCAGTTTCTCTATCCACTGAATCAACAACTTTTAGGACTGTTGCACCAAGTACTGAAAATAACACTTCAACTCTTCTATCTACTGGATCAACAATATTCAAAACTACCACACCAAATCCTGTATCCAAAGATAACACTTCAGTTCTTTTATCTAGATCAACCAATGATTTCAGAAAAAGTTATGGACGTCCTTTAAAATCTGGCTCAATCAACGAATTTAAAGCTAACTCAATTTCATCAACGAATAGAGttgtaataattgataaatccAAAACACCAACTGCAAATCTTTTATCAACTGGATCTTTATCAATAGTCAAAGGTGCTATGCCACAATCTTGGAAAAGCAATGAAATTACAAATCagaaatctgaatcagtgaacAGTTACAGTCATTATTCATGTCCATTATGTCTGCTAGAATATCCATCTTTAATGTTTTTCCAGGCTCATCTCAAATATGCTCATGCAAATTCCATCCGAACTAATCAACTGACTATCCCACAGATGAATCAAGCTCAGAAGACCTCTATGATAGAATGTTTATTGTGTCCACGTATCTTCACTGATGAGATCAAGTATAAAAAGCATTTAAGAAACTATCATACATATTGTGTGTATATCCCAAACTCTGAAGAGATGACAAAAATCAATAACGTATCCAATCCCGTAATAACACAGACGGACATCAGTAGGAGAAACACAATTCCTGAAATAATTACTGTAGATGATGATAATAACACATCAGATCAACAGGCAGCCCAAGTAGTAGCCACGCTCGATCACAAAAAACAGAATGAGAAAATTGGTAAATTGAGAGTGAAGCCTTTTGCAAagatcattgaaaatttatctacGGATTCTGCGTCAAACCTCCTGTAG
Protein Sequence
MNNANKSLDDNVMDSEKSRIEKSFSNEMPPTKKLRQPTLTEYLELCKKKHDIKLSPNKLNIMKDDLPTCGLHHGGQIEGNSRLSEGHNGQIDSLPTTSDNLPKQIAPSIPEQSVKHEICSKKPFVRLHADVEMMKSFLDKLSDMVVKDKVTEERTSDIVSYDREIPYSLRSSRVISSVEADSNSEMSNSKNVSKKSRSNIEFSTKREQNMIDLDKVNSKIDWKIIMAHFKCKECTISLTRCDERPKNSYQISTIETMENTSLTTQCNSMLVQESNIQDKMMLKDLEVSLERLTAVPTIDIKAKTTSDIEKHNNNLFLCKVCKQSFSSKLAKRIHIKSSHIAYMSSICDARYTLKHKLLQHYLREHLFKQDQCCICYMLLPDYEALKQHLNIHCLKYIQRENDRCSVDIELKCNLTKKMFKCLQCNKSSLSSLVAHQSCCTVQEEMKENQEDFMKEASAYPKDNLTMQHKNTDENIVTRDERINPDDLYKSSNSDCVKESNECQILLSSEKEPKINEANQNSFINNNLLTEEKIEIVNKSQDSKKLSENNTVTTNNQNIANAQLDDITTRTTTYPCDICGKQFHNPKKLEVHIRSFSFTTDICPMCGTGFSSKRLLQTHITAAHVPQISKTYSFHCVFCNQGFLRKPDLRPHILHLHSQQVLNMLAHNLNVIEEKSDKSIAHIAICNVCNLVFETHDRYIEHRMYYYKNHTFTCSLCAQNFQGMYMFHHHNKLIHSSEDKRKSYNYICDICNEGFNHESHFHSHNMHVHSNEINLVDAAKESEEKSCFDYSSDVQKQNRNFSTDQQKQNKESSNEYTCQICQLKCTNLNHMEKHKEFYSNDGDFRCDKCNRRCKTFYLLDQHRKLTHSCHDIYNGYACCLCGEVLETVFALKCHEKHFHSNIIDNNADNWENCGQTSSSNITYKVIEHSAESKDNTCNITKYNCLFCNMKFSTANSVQTHIVYAHMDDMIAKRAALKLTLPIIDSDDMQKQFVETDQVSSLSSSEDNLTQFLRRSTIQQSNNIPSNTIAKNGMNDKTTIELLKKFNNVDPKNKIKETLVPAVPYINKSKDNILTCSTIASNTESKVNSSVSLSTESTTFRTVAPSTENNTSTLLSTGSTIFKTTTPNPVSKDNTSVLLSRSTNDFRKSYGRPLKSGSINEFKANSISSTNRVVIIDKSKTPTANLLSTGSLSIVKGAMPQSWKSNEITNQKSESVNSYSHYSCPLCLLEYPSLMFFQAHLKYAHANSIRTNQLTIPQMNQAQKTSMIECLLCPRIFTDEIKYKKHLRNYHTYCVYIPNSEEMTKINNVSNPVITQTDISRRNTIPEIITVDDDNNTSDQQAAQVVATLDHKKQNEKIGKLRVKPFAKIIENLSTDSASNLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00129287;
90% Identity
iTF_00127044;
80% Identity
-