Aash010100.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphaenogaster ashmeadi
Gene Symbol
dmrta2
Assembly
GCA_003063805.1
Location
NJRQ01000113.1:1137-6044[+]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.7e-28 4.3e-24 84.6 10.8 1 47 44 90 44 90 0.99
2 2 0.91 4.5e+03 -1.9 0.3 28 37 219 228 218 233 0.67

Sequence Information

Coding Sequence
ATGTCGCTACCCCGCGGCGTCGGCCTCGGCGTCGACGTCGGCCAACTGATGCAACAccaacaacagcaacagcaacatcACGTGCTGCCGGCCGCGTTCTTTTTGCGCGCCAGTGCCGAGAGGTATCAGCGGACCCCCAAGTGTGCGCGATGTCGTAATCACGGAGTCGTGTCCGCGCTCAAGGGCCACAAGCGCTATTGCCGATGGCGGGATTGCGTGTGTGCCAAGTGCACCCTTATCGCCGAGAGGCAACGCGTCATGGCTGCTCAGGTCGCGCTCAGACGGCAACAGGCCCAGGAAGAAAGCGAAGCGCGCGAGCTGGGTCTGCAATTGCAATACAATGCCGGCAGCTGCAATACTGCCCCCGTTCTACCGGCGGCCGCCGGTGCGACGCCAGCTGGTAGCCCGCCCCCGCACCCGGCGCACGTAGCGAGTCCGGCGGGTCTCGCGATACCCGCGATACccgcggcggcagcggcggcagcggccGCCGCGGCCGCGCATATCCAGACGCAGCTTCACCATCAACAGCCTACTGCGGAATGCGGTCTCCTACCGAGAAAGAGAAAAACAGTAAAAACCACGAAGAGCAGCGAAGATACTATCCCGCCACGAGGAAACCCTTCGGATGCACCTGGTTTCAATTACGATCCCGAATGTACCGCGCGTACCTGCGAGACGAGGGAGATACGTAAGATGTCTCTCTGGCTGATCTTCGAAACAGAGTGCTTACACTAG
Protein Sequence
MSLPRGVGLGVDVGQLMQHQQQQQQHHVLPAAFFLRASAERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEESEARELGLQLQYNAGSCNTAPVLPAAAGATPAGSPPPHPAHVASPAGLAIPAIPAAAAAAAAAAAAHIQTQLHHQQPTAECGLLPRKRKTVKTTKSSEDTIPPRGNPSDAPGFNYDPECTARTCETREIRKMSLWLIFETECLH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00867420;
90% Identity
iTF_01408241;
80% Identity
iTF_00125951;