Aash015715.1
Basic Information
- Insect
- Aphaenogaster ashmeadi
- Gene Symbol
- Rel
- Assembly
- GCA_003063805.1
- Location
- NJRQ01001032.1:7725-20348[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-20 3.4e-16 60.1 0.0 1 74 86 162 86 166 0.92 2 2 1.4e-08 0.00012 22.6 0.0 124 168 160 204 159 205 0.91
Sequence Information
- Coding Sequence
- ATGCCAGACGCGTACGAGAACATTAACATGGCGATGCGAAGTATGCTGACGACCGCGGATAACGAGGACCCGTACTTCCACTTCAACGATTTAACACCAATGGGTAGTACAGGCATCCTAAGCCCATTTAGTAGTTCTGGATCTCAGGGAAATATGAGTATTATGTCACCCATGTCGACGTCCTCGTCGCCTGTGCATATGACAgatgattatattaatctaaCGAATACATTAACAATACTTGGCGAACCATACATCAGTATCTTGGTGCAGCCAATGGAGAAATTTAGATTTCGGTACAAATCCGAAATGGTGGGGACACACGGGAGCCTACTGGGCATATTTAATGGAcgtaaacgaaataaaaataacgtacCCACAGTTAAGTTACATAATTTCCTGGATAAAGCAATAATACGTTGCACATTGGTTACAACTGACGATGACCTCAGGATACCACATGCTCATAGATTAATTAAAGCTGATGCGGAGCAGTATCAAAAGACCATAAACCTAAATAGTGTTGCCCTTTGTTTTCAAGGGTTTATCAAAGATGAACATAATATTATGAGACCGATTACAGCGCCGGTTTATAGCAACTCAGTcaataatttgaaaagtgCATTAACTGGAGAACTTAAGATATGCAGAATTGACAAATATACTAGCAGCTGTGAAGGTGGCGAAGAAGTGTTCATACTTGTCGAGAAAGTATCAAAAAaaaacataaagataaaattctttgAACTCGACGAAGACGATATTGAAGTCTGGGTCGATTATGGTCGTTTCTCGGAACTGGATGTTCATCATCAATATGCCATGGTATTTCGAACACCACCATACAAGGATCGAAATATCACTTCTCCGAAGGAAGTCTTCATACAACTGGAACGTCCTTCAGATTCAGATTGTTCAGAACCAATCAAGTTCACGTATAAGCCAAGTGACCGCATGATAGGTAGGAAGAGAACGCGAGTCTCTCATTCAAATAGCGCGGAACTGGCGCAAATGACATTTAACAATGATACGCTTTTAATGAGTACGCCATCGACAAATATGCTTCCAAGCAATGACagtactgaaatatctaaagaaataaaaaagatgttaGACGATAGATGCTCTTCTAGTGAATTCCGCGAATTTGTCgaacatataaatttagacGACGCTGAAGAGTTGGTGAACATTCGAAACAGTTCTGGAAAGATTCCATTGCATTATGCTGCTTCGCAAGATCAACCGGAAGTTACAAAAGCATTACTCACGCTTGGCGCAGATCCAAATATAGCAGATCATTATGGACAAATGCCATTGCATAGAGCagtaaaatTTCCAGAAGCGGAAGGAAGCATTGACGTTTTATTAgctgaaaaagaaatcaacATCGAAGCAAATACGGATTTAGGATGGTCACCTTTGCAATTAGCTGCCAAAGCGGGCTTATATTATGCAGTGCATTCTCTCGTTAAAGCTGGTGCAGATGTAAATAATACTGACATGACCTATGGAAGAACTGCTTTACATATAGCAGTCGAAGGAGGCCATAAAGACATTGTCGAATTCCTGTTAAAAAACACTAAAATAGATGTAAACAAGAGGAATTTTAGCGGAAATACGGCACTGCACACAGCAATAGTTATACCAGGGACGAAAGCCAAAGAGATATGTGCCCTTCTATTGAAATACGGCGCTGATCCGCACATAAGGAATTATAATCGCGAATCATCTATCGTTGAGAGAGAACagatacaagatataaaaacCGAAGTGCACTCAGAAGATGAAAGTCTGGAAGAATGCACTGGACAATCATCTTTTGACTTGGCATCAAACAAGCCAGATATCTTACAACTCGTGTCCGGTCAAAGTGATACGTTAGTAGACGACACGATTAAATGTAAAGAGGAAAACATAGACGATACGCAGAAAGTTTGGATGGCTGCAGATCAGGAAAAACAATTGGCGAGCATTCTGGACGAGACAAAAGGATGGAAAAAATTGGCCCATCGTTTTAActtcaagtatttattaaatatctttgaacAAAGCTCATCCAGTTCGACATTGCTTCTCTTGAATTATATCGCTaTACAAACCAATACATCTCTCAGCGAATTGCGAAGCATATTACATGAGATAGGCGAAGAAGATGCTGCGACATACATGGCTCAAGTTTTATCTATGAAACACGAAACATGA
- Protein Sequence
- MPDAYENINMAMRSMLTTADNEDPYFHFNDLTPMGSTGILSPFSSSGSQGNMSIMSPMSTSSSPVHMTDDYINLTNTLTILGEPYISILVQPMEKFRFRYKSEMVGTHGSLLGIFNGRKRNKNNVPTVKLHNFLDKAIIRCTLVTTDDDLRIPHAHRLIKADAEQYQKTINLNSVALCFQGFIKDEHNIMRPITAPVYSNSVNNLKSALTGELKICRIDKYTSSCEGGEEVFILVEKVSKKNIKIKFFELDEDDIEVWVDYGRFSELDVHHQYAMVFRTPPYKDRNITSPKEVFIQLERPSDSDCSEPIKFTYKPSDRMIGRKRTRVSHSNSAELAQMTFNNDTLLMSTPSTNMLPSNDSTEISKEIKKMLDDRCSSSEFREFVEHINLDDAEELVNIRNSSGKIPLHYAASQDQPEVTKALLTLGADPNIADHYGQMPLHRAVKFPEAEGSIDVLLAEKEINIEANTDLGWSPLQLAAKAGLYYAVHSLVKAGADVNNTDMTYGRTALHIAVEGGHKDIVEFLLKNTKIDVNKRNFSGNTALHTAIVIPGTKAKEICALLLKYGADPHIRNYNRESSIVEREQIQDIKTEVHSEDESLEECTGQSSFDLASNKPDILQLVSGQSDTLVDDTIKCKEENIDDTQKVWMAADQEKQLASILDETKGWKKLAHRFNFKYLLNIFEQSSSSSTLLLLNYIAIQTNTSLSELRSILHEIGEEDAATYMAQVLSMKHET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -