Basic Information

Insect: Apamea sordens
Gene Symbol: lrrfip2
Assembly: GCA_945859755.1
Location: CAMAOQ010000001.1:2391596-2404419[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.019 6.1e+02 0.3 0.8 43 91 53 102 36 107 0.80

2 20 6.1e-69 1.9e-64 218.6 9.7 1 222 122 344 122 351 0.93

3 20 0.0032 1e+02 2.8 0.1 200 222 355 377 349 383 0.89

4 20 0.0032 1e+02 2.9 0.1 200 222 388 410 381 414 0.89

5 20 0.0031 1e+02 2.9 0.0 200 222 421 443 412 446 0.89

6 20 0.0034 1.1e+02 2.8 0.1 200 222 454 476 449 480 0.89

7 20 0.0031 99 2.9 0.1 200 222 487 509 480 515 0.89

8 20 0.0032 1e+02 2.8 0.1 200 222 520 542 513 546 0.89

9 20 0.003 96 2.9 0.0 200 222 553 575 543 579 0.89

10 20 0.0032 1e+02 2.8 0.1 200 222 586 608 579 612 0.89

11 20 0.0029 93 3.0 0.1 200 222 619 641 609 647 0.89

12 20 0.0032 1e+02 2.8 0.1 200 222 652 674 644 677 0.89

13 20 0.0032 1e+02 2.8 0.1 200 222 685 707 677 710 0.89

14 20 0.0031 1e+02 2.9 0.1 200 222 718 740 712 747 0.89

15 20 0.0029 94 3.0 0.0 200 222 751 773 742 780 0.89

16 20 0.003 96 2.9 0.1 200 222 784 806 774 810 0.89

17 20 0.0029 93 3.0 0.0 200 222 817 839 807 845 0.89

18 20 0.0032 1e+02 2.8 0.1 200 222 850 872 842 875 0.89

19 20 2.4e-16 7.7e-12 45.9 7.0 200 297 883 972 876 974 0.80

20 20 1 3.2e+04 -7.2 14.0 1 49 971 1018 971 1045 0.70

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.019	6.1e+02	0.3	0.8	43	91	53	102	36	107	0.80
2	20	6.1e-69	1.9e-64	218.6	9.7	1	222	122	344	122	351	0.93
3	20	0.0032	1e+02	2.8	0.1	200	222	355	377	349	383	0.89
4	20	0.0032	1e+02	2.9	0.1	200	222	388	410	381	414	0.89
5	20	0.0031	1e+02	2.9	0.0	200	222	421	443	412	446	0.89
6	20	0.0034	1.1e+02	2.8	0.1	200	222	454	476	449	480	0.89
7	20	0.0031	99	2.9	0.1	200	222	487	509	480	515	0.89
8	20	0.0032	1e+02	2.8	0.1	200	222	520	542	513	546	0.89
9	20	0.003	96	2.9	0.0	200	222	553	575	543	579	0.89
10	20	0.0032	1e+02	2.8	0.1	200	222	586	608	579	612	0.89
11	20	0.0029	93	3.0	0.1	200	222	619	641	609	647	0.89
12	20	0.0032	1e+02	2.8	0.1	200	222	652	674	644	677	0.89
13	20	0.0032	1e+02	2.8	0.1	200	222	685	707	677	710	0.89
14	20	0.0031	1e+02	2.9	0.1	200	222	718	740	712	747	0.89
15	20	0.0029	94	3.0	0.0	200	222	751	773	742	780	0.89
16	20	0.003	96	2.9	0.1	200	222	784	806	774	810	0.89
17	20	0.0029	93	3.0	0.0	200	222	817	839	807	845	0.89
18	20	0.0032	1e+02	2.8	0.1	200	222	850	872	842	875	0.89
19	20	2.4e-16	7.7e-12	45.9	7.0	200	297	883	972	876	974	0.80
20	20	1	3.2e+04	-7.2	14.0	1	49	971	1018	971	1045	0.70

Sequence Information

Coding Sequence: ATGGGACAGCGCTCCGAAGTGGCCACGCCTGACAATAGTGATGAGGAGAGCGGGGACGCCTTCACTGACGGAGATTTTGGTGATTCCGATGACGAGACGATCGTCGAACGCCTTGATGAAGCTAAGCCTGCTCACATGCCGATCAATGAAGCTGTAAAAGATGATATTCAGAAGAGTGCACCTACTAATGGTCACTCTAATGGTAGTGTGGATGAGCAGTCCAGAATGAATGGCCGTAAAAATAGTGAAGCTCATTCAAGTGATATGGAAAACCAAAGCTTAGTGTTATCGGATTTGCGCCGAGATTCACACGGCGATCAGAATCCTTCAATCGTTGGCATTCTCGGCGATCAGCAGAATCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCAGCGCGGGCTGAAGCGCGAGAAATACGCATGCGTGAGCTGGAGAGGCAGCAGCGTGAACAGGAGGACCATGCCGACAAGGCGTACGATATGTATGCTGGCAAAACACCAGAGACGGTGGGTCGTCGCGGAGCCACGAGGCTGACAGCGCTCAGCCCAGCCGTGCACTCACCGAGACGAAGCTCTGAAGACTCTGTTGATGATGGCTTCAGCATCAAGGACCTTAGGCATGAGTTGAAAGAGGTGGAGGAGAAGTTCCGTAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCCGCACTCGGCTACCAGTTGGAGCTGCTTAAGGACAGGATAGAGGAGCTGCACGAGGAGTACGCGCAGCTACAGCGGGAACACAAAGAAAAATGCTCATCATTCGAGCGTTTAAAGCGGGAACACGAGTCCGTGACCCGCGAGCTGGGCGCGGCGCGGGACGCCGTGCGCGCGCGggacgcggcggcggcgggcgcgggcttCGCCTTCGTGGACGCCGCGGCGCTGGACGTGGCGGCGCGCGGGGCCGCGGGCGCGCCCGTGGGGGCCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTGGACGACGCCGGGGAGGGCACGCTCGGTACGTACCGCTACATTCTAGACGTGCTCGTGCCCGCGCTGGCGCTCGTCACGCAGCAGGCGCAGCAGCTGCTCGACGACGCCGGGGAGGGCACGCTCgACGTGCGGTTGCAAAAGCTGTTAACCTCGAAGCAGGCCCTGGAGTCAGAAGTACGCAAGTTGAAACTACAACTGAATGAAGAACGCGCTGCCAGACAGAACGGAGTCGCCAACCATCACGACCAAGAGTATGAGAACGAACTGGAGACGGTGCGCAAGGCGGTGGCGGAGGCCAAGGCCCGCGCGGCGCGCGCCGAGGCGGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGTCTGGAGGCGCAGCTGGCGCGGTGCCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGCTCGGGAAGCACTCAATCGGGTTGAAGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGACTCGACAAACTCAAGAACGCGAAGTCTGCACTCCTCAAAGACCTGTGA
Protein Sequence: MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERLDEAKPAHMPINEAVKDDIQKSAPTNGHSNGSVDEQSRMNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSFERLKREHESVTRELGAARDAVRARDAAAAGAGFAFVDAAALDVAARGAAGAPVGAVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLGTYRYILDVLVPALALVTQQAQQLLDDAGEGTLDVRLQKLLTSKQALESEVRKLKLQLNEERAARQNGVANHHDQEYENELETVRKAVAEAKARAARAEAEAALQAAHVARLEAQLARCRARQGHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -