Asor029518.1
Basic Information
- Insect
- Apamea sordens
- Gene Symbol
- -
- Assembly
- GCA_945859755.1
- Location
- CAMAOQ010000183.1:5564746-5565243[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-09 1.5e-06 28.6 0.0 4 41 17 55 14 57 0.94
Sequence Information
- Coding Sequence
- ATGGTTCGccactatagaaaaaaaacggaCAAGTCATACACAATGGCAGAATTGCAGCAAGCAGTACAAGatgtcaaaaataaagtaatgacGAGTTACCAAGCTGAAGAAATATATGGCATTCCTAGATCAACCATTGTAACTAGAGTTTACAATAATCACATGAACGACAACGTTGGAAGACCTATAGCTCTCGGGGAAGATGTGGAGAGAAGAATTGCCCATAGCTTACATGTTATGGAAAAACATGGTTTCCCGTTAACTAGAAAAGAAGTAGCTGTTTTGGTATCTCAATATGTTCGCCAAAATGGAATCGACAATCCCTTCAAAAATGATTTGCCAGGAAAAGACTGGCTCCAGGCATTTCAGAAAAGGAACAGTCTCTCAATCAAAAAGCCTCAATCCGTTGAGATAGCTAGACGAAAGGCTTGCGATCCTTTTATTGTTTATAGTTATTTCGATTTACTAGAAAAACGTAAATTGGTATATACTTTATAA
- Protein Sequence
- MVRHYRKKTDKSYTMAELQQAVQDVKNKVMTSYQAEEIYGIPRSTIVTRVYNNHMNDNVGRPIALGEDVERRIAHSLHVMEKHGFPLTRKEVAVLVSQYVRQNGIDNPFKNDLPGKDWLQAFQKRNSLSIKKPQSVEIARRKACDPFIVYSYFDLLEKRKLVYTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00121354;
- 90% Identity
- iTF_01525916;
- 80% Identity
- -