Aanc028936.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Apamea anceps
Gene Symbol
-
Assembly
GCA_951799955.1
Location
OX637530.1:4555013-4567138[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 34 0.018 1.5 10.2 1.0 1 23 84 107 84 107 0.95
2 34 3.9 3.3e+02 2.9 2.6 2 23 180 203 179 203 0.88
3 34 0.003 0.25 12.7 0.2 1 23 207 229 207 229 0.98
4 34 0.79 67 5.1 2.9 1 23 234 257 234 257 0.94
5 34 2.8 2.3e+02 3.4 2.8 1 23 264 287 264 287 0.93
6 34 0.00024 0.02 16.1 0.6 1 23 294 317 294 317 0.97
7 34 0.00026 0.022 16.0 5.9 1 23 323 345 323 345 0.98
8 34 6.9e-05 0.0058 17.8 0.9 2 21 352 371 351 372 0.93
9 34 0.036 3 9.3 1.1 1 23 442 465 442 465 0.94
10 34 3.5 2.9e+02 3.1 2.9 2 23 538 561 537 561 0.89
11 34 0.0031 0.26 12.6 0.6 1 23 565 587 565 587 0.96
12 34 0.82 69 5.0 1.8 1 23 592 615 592 615 0.94
13 34 0.2 17 6.9 1.0 1 23 622 645 622 645 0.95
14 34 0.00022 0.019 16.3 0.7 1 23 652 675 652 675 0.97
15 34 0.00083 0.07 14.4 5.8 1 23 681 703 681 703 0.97
16 34 1.4 1.2e+02 4.3 0.5 1 13 709 721 709 724 0.90
17 34 0.011 0.92 10.9 0.9 1 23 791 814 791 814 0.95
18 34 0.0043 0.36 12.2 0.4 1 23 914 936 914 936 0.96
19 34 4.9 4.1e+02 2.6 1.9 1 23 941 964 941 964 0.87
20 34 0.4 34 6.0 2.0 2 23 972 994 971 994 0.94
21 34 0.00038 0.032 15.5 1.8 1 23 1001 1024 1001 1024 0.96
22 34 0.0002 0.017 16.4 2.0 1 23 1030 1052 1030 1052 0.98
23 34 9.6e-06 0.00081 20.5 1.8 1 23 1058 1080 1058 1080 0.99
24 34 2.4e-06 0.00021 22.4 0.3 1 23 1086 1109 1086 1109 0.97
25 34 0.04 3.4 9.2 1.5 1 23 1173 1196 1173 1196 0.94
26 34 2.4 2e+02 3.6 0.3 2 23 1223 1245 1222 1245 0.94
27 34 0.019 1.6 10.1 3.0 2 23 1268 1289 1267 1289 0.96
28 34 0.00069 0.058 14.7 0.2 1 23 1293 1315 1293 1315 0.94
29 34 0.019 1.6 10.2 1.0 1 23 1320 1343 1320 1343 0.97
30 34 0.0018 0.15 13.4 1.5 1 23 1350 1373 1350 1373 0.97
31 34 0.00033 0.028 15.7 0.5 2 23 1381 1403 1380 1403 0.95
32 34 0.0015 0.13 13.6 3.1 1 23 1409 1431 1409 1431 0.97
33 34 5.2e-05 0.0044 18.2 1.7 1 23 1437 1459 1437 1459 0.99
34 34 0.012 0.99 10.8 5.0 1 23 1465 1488 1465 1488 0.98

Sequence Information

Coding Sequence
ATGCCTCTTTCGGATCGGAAAGGGCTTTTATTACATTATAAACAACAAAAACTGGCCACAGCTTCGAAAATCAAAATAGAGCCGAAAGCTGAAGCGACTGTAATACCTATTGAAGagcatgtaaaaataaaaccagaGACAGCGCCTCAACCAGGACAAAAGCGACAACTACACAAGCATCTACACAATCTGAAAATAATCCTAGAATCTACTAACGCCACGATGATACTCAAACATGGAGATAAGGGATATTTGTGCTGCTACTGCACGGAAGCTTTTCAAGAACCAATGAACTTGAAAGTACACACTTTAACGGACCACCAAAATGAAGACAAAATCTATGGCACCCTAAAAGGCAGAGGACCATCTAGATTCTTAGTCAAACTTGACATCACGAACCTAAAATGCATGATCTGCAGCGCCAATATAGACTCTCTCGAAGATCTGTTCATCCATCTGACAGAGAAACATAACAAGAACTTCCACActgatatacaaaatcaaatatttcCTTTCAAGTTCAACACGAAGCAACTGAAATGCTACCAATGTACTAGTGACGTCGTTTTCGCCACGTTCAGCGCATTACACGAGCATATGCACAAACACTACCGACACTTCGTTTGTAACGAGTGTGATGCTGGATTCATCAATCACATATCATTAGCCAGTCATAGAGTCACTCACACAAAAGGGACCTTCACCTGCCGACATTGTCCTCTTGTTTTTGATAACGTATTCAAAAGAAAGAACCACGAAATGCGTAGCCACAGTAAAGCTGGCAAATTACATATATGCCATTTCTGTAATGAAGGTTTTAAGGAGTATGTAACGAAGGAATTGCATCTAACTACAGTTCATGGCGTTGCTCCGCGGAAATATAACTGCACCGCGTGTGACAGGAGCTTTCCATCCAATAGTTTTCTCAGCGCACATGTCAGAAGTTTTCACCTGATGGAGAAGAGTCACAAATGTTCAGAGTGCGATAAAGAGTTTTTTAGAGAAGCCCATCTCAAAAAACATAAGATGAGTCATAGTGAGGCTGCAGATCTCACATGTGAAGTCTGTTCAAAGCATTTCGCCAATAAATCTAGTCTATCGCGGCATATGGATAAACAAGAAAAAGTGGCTACAACTACGAAAATCAAAATAGAGCCGACAGCTGAAGAAACTAAAGTGCCTAAAGAAgggcatataaaaataaatccagaGACAGCGCCGCGACCACGCATAAAGCGACTATTGTACAAGCATCTACACAATCTGAAAATAATCCTAGAATCTACTAACGCCACGATGATACTCAAACATGGAGATAAGGGATATTTGTGCTGCTACTGCACGGAAGCTTTCCAAGAACCCATGAATTTGAAAGTACACACTTTAAGGGaacatcaaaatgcagaaaagtTTTATGGAAACATTAAAGCCAGAGGACCCTCTAGGTTCTTAGTCAAGCTTGACATCACGAACCTAAAATGCATGCTTTGCAGCGCCAATATAGACTCTCTCGAAGATCTATTCGTGCATCTGACAGAGACACATAATAAGAACTTCCACACTGATATACAAAATCAGATATTTCCTTTCAAGTTCAATACGAAGCAACTGAAATGCTATCAATGTACTAGTGACCTCGTTTTCGCCACCTTCAGCGCATTACATGAGCATATGCACAAGCACTACCGACACTTCGTTTGTAACGAGTGTGATGCCGGATTTATCAACCATGAAACATTATCCAAACATAACGTTACTCACACGAAAGGGTCATTCGTCTGCCGACATTGTCCTGTAGTATTCGACAATGTGTTCAAGAGAAGAAACCACGAGATGCGCAGTCATACTCACACTGACAAATCATATTTATGCCATTTATGCAATGAGGGTTTTAAAGAATATGTAACGAAGGAATTACATATGTCTACAGCTCATGGCGTTGCTCCGCGGAAATATAACTGCACCGCGTGTGACAGAAGCTTTCCTTCGAATAGTTTTCTTAGCGCACATGTCAGACGCTTCCACCTGATGGAGAAAAGTCACAAATGTTCAGAGTGCGACAGAGCGTTCTTCAGAGGAAGCCACTTAAAGAAACATAAGTTGAGTCATACAGGAGCTAAGAACTTCAAATGTGAAGTCTGTTCAAAGCTTTTCGCCAATAAACAAGAAAAAGTGGCCACAGCtaaggaaatcaaaatagaGCCGAAAGCTGAAGAAACTATAGTACATAaggaagagaaaataaaaataaatccagaGACAGCGCCTCGACCACGCGTAAAGCGCCTACTACACAAGCATCTGCACAATCTAAAAATAATCCTAGAATCTACTAACGCCACGATGATACTCAAACATGGAGATAAGGGATATTTGTGCTGCTATTGCACGGAAGCTTTCCAAGAACCCATGAATTTGAAAGCACACACTTTGACGGaacatcaaaatgcagaaaagtTCCATGGAAACATTACAGCTAATGGACCATCTAGGTTCTTAGTCAAACTTGACATCACGGACCTAAAATGCATGCTTTGCAGCGCCAATATAGACTCTCTCCATGATCTGTTCGTGCATCTGACAGAGAAACATAATAAGAACTTCCACACTGATATACAAAATCAGATATTTCCTTTCAAGTTCAATGCAAAGGAACTGAAATGCTGCCAATGTACTAGTGATGTCGTTTTCGCCACGTTCAGCGCATTACACGAGCATATGCACAAGCACTACCGACACTTCGTTTGTAACGAGTGTGATGCTGGATTCATCAATCACATATCATTATCTAGACATAGCGTTACTCACACGAAAGGAACCTTCGTCTGCCGACATTGTCCCTTTGAATTCGACAACGTGTTCAAGAGAAGAAACCACGAGATGGGCAGCCATAAGAAACctggcaaattaaataaatgccaCTTCTGCAATGAAGGTTTTAAGGATTATGTTACGAAAGAGTTGCATCTTTCTAAGGTTCATGGCGTTGCTCCACGAAAACATAACTGCACCGCGTGTGACAGGAGCTTTCCTTCCAATAGTTTTCTTAACGCACATGTCAGACGCTTCCATCTGATGGAAAAAAGACACAAATGTTTCGAGTGCAATAGAGCGTTCTTCAGAGGTGGCGACCTAAAGAAACATATGTTAATACATACAGGAGCTAAAGATTTTAAATGTGTAGTCTGTTCAAAGTATTTTGCTAAAAAATCCACTCTAAATCAGCATATGAGGATTCATAATAATGATAAGCGTTTTAAATGTACAATATGTGATCAGGCGTTCGTGCAGAAACCTAGCTTGACGTGGCATATGAGGGCAAAGCACGAAGATGCTTGTGGTCAACAAAGAACTGTTGAGGAAAAAGAAACGAACGGCAAAGAACTTACGGACCAAATAGAtgaaaaagaactaaaaacaaCACCAAGAACTGAGCTATTAAAACATAGAAGTAACATTAAAGAAGTCCTTCTTCATTCTAATGCGACGCCTGTAAGACGGTACGGAGGGATCGGATACACGTGCTGCTACTGTCCTGACCAGTTTGAATACCCTGGAGACCTTAAGAAACATACTCTAGAGAACCACAAAAATATCTCGGAAGcaaactttatgaaaaacatGAACATGTCCGAATATATTGTCAAATTAGATATAACCTCATTGAAATGCAAGCTTTGTGACAGTAATATGGATACTCTAGATAACTTTATAGACCATCTTCAAAACGTACATGAGAAAAATATCGACAAGGATCATATAAACCACATCTTTCCTTTCAAATTCAGCAACGATTTACTCATATGCAATAATTGCTCGAACACTTTTAGCAAGTTCAGGACCCTTGTTAGACATATGCATATTCATTATAGGAATTACATTTGCACCGTTTGCGACACCGGTTTCGCTAACCGAAACTCACTAACCCAACATGTAGTTAATCACAAAACAGGGGCATTTGTTTGTGATTACTGTCCGAAGTTCTATCCTACtctagtaaaaaaaagaatgcACGAAAGAACATCCCACACTCACGTCGATGCTACTTATAAATGTGGTTATTGTCAGGAAACTTTTAAAGATCATGGACAAAAGGAAGCTCATGTAACTACTGAACATGGTGTGGTATCATTGAAAAGTGTATGTCAAGCTTGCAACAAAGTATTTCCCAATAGGAAGAAACTTACCATACACATTAAAAGAGACCATCTAATGGAGAGACCACACAAATGTAAGGAGTGTGAAATGTCATTTTATTCCACGACAGGGCTAAAAAGTCATATGGTCAAGCATACAGGGTTGAAAGAATTTCAGTGCTCAGTATGTCTCAAGAAATATGGAAGGAAGAAGACACTGAATGCTCACATGCAGACACATTCTGAGGAGAAGAGGTTCAAATGTGAAAAGTGTGCGCAGAAATTTACGCAGAAATGTACTTGGAGAGGACATATGAGATCCAAACATggagaaattgtttaa
Protein Sequence
MPLSDRKGLLLHYKQQKLATASKIKIEPKAEATVIPIEEHVKIKPETAPQPGQKRQLHKHLHNLKIILESTNATMILKHGDKGYLCCYCTEAFQEPMNLKVHTLTDHQNEDKIYGTLKGRGPSRFLVKLDITNLKCMICSANIDSLEDLFIHLTEKHNKNFHTDIQNQIFPFKFNTKQLKCYQCTSDVVFATFSALHEHMHKHYRHFVCNECDAGFINHISLASHRVTHTKGTFTCRHCPLVFDNVFKRKNHEMRSHSKAGKLHICHFCNEGFKEYVTKELHLTTVHGVAPRKYNCTACDRSFPSNSFLSAHVRSFHLMEKSHKCSECDKEFFREAHLKKHKMSHSEAADLTCEVCSKHFANKSSLSRHMDKQEKVATTTKIKIEPTAEETKVPKEGHIKINPETAPRPRIKRLLYKHLHNLKIILESTNATMILKHGDKGYLCCYCTEAFQEPMNLKVHTLREHQNAEKFYGNIKARGPSRFLVKLDITNLKCMLCSANIDSLEDLFVHLTETHNKNFHTDIQNQIFPFKFNTKQLKCYQCTSDLVFATFSALHEHMHKHYRHFVCNECDAGFINHETLSKHNVTHTKGSFVCRHCPVVFDNVFKRRNHEMRSHTHTDKSYLCHLCNEGFKEYVTKELHMSTAHGVAPRKYNCTACDRSFPSNSFLSAHVRRFHLMEKSHKCSECDRAFFRGSHLKKHKLSHTGAKNFKCEVCSKLFANKQEKVATAKEIKIEPKAEETIVHKEEKIKINPETAPRPRVKRLLHKHLHNLKIILESTNATMILKHGDKGYLCCYCTEAFQEPMNLKAHTLTEHQNAEKFHGNITANGPSRFLVKLDITDLKCMLCSANIDSLHDLFVHLTEKHNKNFHTDIQNQIFPFKFNAKELKCCQCTSDVVFATFSALHEHMHKHYRHFVCNECDAGFINHISLSRHSVTHTKGTFVCRHCPFEFDNVFKRRNHEMGSHKKPGKLNKCHFCNEGFKDYVTKELHLSKVHGVAPRKHNCTACDRSFPSNSFLNAHVRRFHLMEKRHKCFECNRAFFRGGDLKKHMLIHTGAKDFKCVVCSKYFAKKSTLNQHMRIHNNDKRFKCTICDQAFVQKPSLTWHMRAKHEDACGQQRTVEEKETNGKELTDQIDEKELKTTPRTELLKHRSNIKEVLLHSNATPVRRYGGIGYTCCYCPDQFEYPGDLKKHTLENHKNISEANFMKNMNMSEYIVKLDITSLKCKLCDSNMDTLDNFIDHLQNVHEKNIDKDHINHIFPFKFSNDLLICNNCSNTFSKFRTLVRHMHIHYRNYICTVCDTGFANRNSLTQHVVNHKTGAFVCDYCPKFYPTLVKKRMHERTSHTHVDATYKCGYCQETFKDHGQKEAHVTTEHGVVSLKSVCQACNKVFPNRKKLTIHIKRDHLMERPHKCKECEMSFYSTTGLKSHMVKHTGLKEFQCSVCLKKYGRKKTLNAHMQTHSEEKRFKCEKCAQKFTQKCTWRGHMRSKHGEIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00758465;
90% Identity
-
80% Identity
-