Achi000267.1
Basic Information
- Insect
- Antitype chi
- Gene Symbol
- Znf711
- Assembly
- GCA_947359405.1
- Location
- OX375837.1:5640563-5649774[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00045 0.035 15.0 2.0 1 23 209 232 209 232 0.97 2 11 0.00044 0.035 15.0 0.1 1 23 239 261 239 261 0.94 3 11 0.11 9 7.4 2.0 2 23 266 287 265 287 0.96 4 11 0.061 4.8 8.3 0.4 2 23 291 313 290 313 0.96 5 11 0.00015 0.012 16.5 8.8 1 23 316 338 316 338 0.95 6 11 0.03 2.4 9.2 5.9 1 23 342 365 342 365 0.91 7 11 0.27 21 6.2 0.4 3 22 375 394 374 398 0.90 8 11 0.00097 0.077 13.9 1.7 1 23 410 433 410 433 0.96 9 11 0.32 25 6.0 3.7 1 23 439 462 439 462 0.95 10 11 1.6e-05 0.0013 19.5 0.3 3 23 473 493 472 493 0.99 11 11 0.0033 0.26 12.3 0.6 1 23 499 522 499 522 0.96
Sequence Information
- Coding Sequence
- ATGTATGAAATAGAAGAATTAAAGTATGATTTTGCTTTTACAAGCAGTGGTTCGTTCTGCAAAGCCTGTTTGAGCTCTGATCGCAGCCTTTCTCCGATCGGCGAATATGCTGATGTATTTAGCAATATTTCAAATATTATATTGCCTCAACCATTATTTTTATGTTGGGAATGTCTAGCCATGCTAAAAAATATAAAAATCTTTAAAAATAAGTTAGAAGAAGCACAGCGGATACTGACATATCATTATCTTAATAAACAGAAATTGCTTCTAAAGACCCTATCAAAATTAACAAAAACATACACAGATCATACAATTTTCATTACACATACCGAAGAAGAAGATGACTGCAAGCAAAAAGTAATCATAAAACAAGAAAATGAACATTTCAATGATTCCTTTCATAATTATGATGAAAATAACGACTTTAGTCCCCAAGAAATTAAAAAAGAAAATGAAACAGAGACTAAAGTAGCAACAAAAAAAGAAAAATCACTGCATTATAGAATAGTCTATGAAAAGAATGCCAAAAAGGTTTTGAGAAAAAAGTTTGCTATACAACCTGGTGATTCACAAATATGGCTGGACAGTGAGAGGAAATGTGATTTCTATATGGAGTTTAAATATAAATGCAAGTTGTGTGTAAATGGATTTAATACTAAGGACAAATTGAAAACGCACATCTTAAAATATCACGATGAATCTGCAGGCTCCCACATTTGCCCAACATGCAACATACGGTTTAACAGCGAGGCCTCTCTAAGCGCACACATAGATGCGCATAAGTTTGCATGGGAATGTGCGCGCTGTGGCTTTAAGTGTTATACTGTGAGGAGATTCAAAGCACATATAAACACGCATAGTGCGGTGCAGTGTGTGTATTGTGAGGCGAAGTTCCAAGATTTGGCGACGTTCTACACACACTACAAATCCTTGCACAGTATATTTCTCTGCGATCACTGTGGAAAGCGATGTAAAACTAAACATATGCTTGAAAAACATATGAGCCGTCACCTGGACACGCACACCTGTTCAACTTGCTCTCGCCACTACAAGTCGCGCGCTGCATTGCGCAAACACTTCTCTTTGAAGCACAGCTCTTGTGTCGCTGAGCAAGCGTACTGTGTGTTGTGTGATAAACAGTATGAGAGCGAGTATGTTTATAGAAGGCATGTGCATACCAGCGCTGCGCATCGACGGGAGAGGGAGAGCCAAGTCAAAAAGAAGTTTCCGTGCCCAGAATGCAGCAACACATACTCTAGACGAGCATACATGATGAATCACTACCGACACGTGCATATGAATCAGTCAAAATACTACTGCTTGGAATGTGATAGACATTTTCTGAACAGAACGCGGTACGTAGACCACATGCGGTTCAATCACGAAGGAGTAAAAAAAGACAAGAATAAACTTTGTAATATTTGTGGAAGAGGATTCGCTGCAAACCGTACTCTTCTTAACCACATGCGGACGCACTCGGGCGAGCGGCCGTACGAGTGCGAATACTGTGCCGCTAAGTTCACCCAACGAACTTCCATGTTGTCACATGTCAAGTATATACATATGAAGAGTAAGCGAAGGCAGCAGTGGCAGCAGTGA
- Protein Sequence
- MYEIEELKYDFAFTSSGSFCKACLSSDRSLSPIGEYADVFSNISNIILPQPLFLCWECLAMLKNIKIFKNKLEEAQRILTYHYLNKQKLLLKTLSKLTKTYTDHTIFITHTEEEDDCKQKVIIKQENEHFNDSFHNYDENNDFSPQEIKKENETETKVATKKEKSLHYRIVYEKNAKKVLRKKFAIQPGDSQIWLDSERKCDFYMEFKYKCKLCVNGFNTKDKLKTHILKYHDESAGSHICPTCNIRFNSEASLSAHIDAHKFAWECARCGFKCYTVRRFKAHINTHSAVQCVYCEAKFQDLATFYTHYKSLHSIFLCDHCGKRCKTKHMLEKHMSRHLDTHTCSTCSRHYKSRAALRKHFSLKHSSCVAEQAYCVLCDKQYESEYVYRRHVHTSAAHRRERESQVKKKFPCPECSNTYSRRAYMMNHYRHVHMNQSKYYCLECDRHFLNRTRYVDHMRFNHEGVKKDKNKLCNICGRGFAANRTLLNHMRTHSGERPYECEYCAAKFTQRTSMLSHVKYIHMKSKRRQQWQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00238170;
- 90% Identity
- iTF_01093510;
- 80% Identity
- -