Basic Information

Insect: Anticlea derivata
Gene Symbol: lolal
Assembly: GCA_947579855.1
Location: OX388257.1:10653845-10658538[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.1e-16 3.1e-13 49.3 0.0 1 42 343 385 343 388 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.1e-16	3.1e-13	49.3	0.0	1	42	343	385	343	388	0.94

Sequence Information

Coding Sequence: ATGGCCCAGCAATACAGTCTGAAATGGAACAACCACCAGCCGAACTTCATCTCGATGTTCGCGATGCTGCGGAACACGCAGGCGCTGGTGGACGTCACCCTGGCGGCGGAGGGCCGGCACCTACACGCCCACAAGATGGTGCTCTCAGCCTGCAGCCCTTACTTTCACTCACTGTTCGTTGAGAACCCATCTCGGCACCCGATAGTGATTCTGAAGGATGTCGCGTTCTCAGACCTGCGCACTATCGTCGACTTCATGTACTACGGCGAAGTCAACATTACGCAAGAGGAACTGCCTCAGATGCTGCACTCCGCAAAGTCCCTCAAAGTGAAAGGTCTCACAGAAACAGAATCAACATCAGTAATGCGTTCACAGTCGTCCGACTTCCCGTACGAAGCGTCCGGAGAAGCGTCCGGCGAGCAGCCCGGGGAGCCGTCCGGTGAACAACCCGGGGAGCAGGCGAATGAGCCTTCTAATGAGCCGACCAACGAGCCGTCGGGAGAAGGCGAGCCGCAAAGGCGGACGTCGGCCTCACCCGCCAACTCACCCTCTGCGAAACGACGACGGCGCAGAAGAAGTTCAAACGGATCGACGTCTCTCAACATGGTGGGCGAGGAGAACCGAGACGATCAAACAATGGAAATAATCAGAGATGGCATCACATTAAGCAGCGTGCCGCGCCGCCGGGAATTCTCACACGATGAAAACAACACGCAACAGAATACAGAGCCACAAAACATTAGTATAGACGACCTGAACGTCGACCACAATACCGCAGGAATGCCTCAAGGAGGTCAGTGGAGTATGATGGAGCACACATACCCGCGGTATACGAACTCGTGCTTCGGCGGCGCGCTGGGGGGCGAGGGCGGCGGCATGTACATGGGCGGCATGATGCACGCGCAGCACATGGAGGGCGAGCTGTACGTGCCGCCGGCCGGGCCCAGCTGCGCCCCGCCCGCCGCGCCGGCGCCCGAGCAGCCACCCGCCGCGCCCGCCAAGCGGCGCCGCACCACCAACCCCCAGTCCGAGGAGAACTTCCAGCGCGCGCTCGAGGCGGTGCGCATCGGCGGCATCGGCTTCTGCAAGGCGGCGCGCATGTTCGGCGTCAACAACCGCACGCTCTGGCTCGAGTACAAGAAGAAGGGCTACCCCAACAACCGGCCGAGCATCAAGAGCCGCATCAAGCGCGAGCACGCGACGCCGCCGCCGCCGCACAAGGAGGAGCTGCCGCCGGCGGACCACCACATGGCGCTGCTGTGCCACACGGCGCACCCGCACGCCGCGCACCAGCTCTCCGTCGGCTTCGTGGACTCGCGCCCGCTCGACCTGCCGCTGCAGGGCATGAACATCCTCGGCGGGCTCAACTTCAACTCGATGCAATAG
Protein Sequence: MAQQYSLKWNNHQPNFISMFAMLRNTQALVDVTLAAEGRHLHAHKMVLSACSPYFHSLFVENPSRHPIVILKDVAFSDLRTIVDFMYYGEVNITQEELPQMLHSAKSLKVKGLTETESTSVMRSQSSDFPYEASGEASGEQPGEPSGEQPGEQANEPSNEPTNEPSGEGEPQRRTSASPANSPSAKRRRRRRSSNGSTSLNMVGEENRDDQTMEIIRDGITLSSVPRRREFSHDENNTQQNTEPQNISIDDLNVDHNTAGMPQGGQWSMMEHTYPRYTNSCFGGALGGEGGGMYMGGMMHAQHMEGELYVPPAGPSCAPPAAPAPEQPPAAPAKRRRTTNPQSEENFQRALEAVRIGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHATPPPPHKEELPPADHHMALLCHTAHPHAAHQLSVGFVDSRPLDLPLQGMNILGGLNFNSMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00119714; iTF_00377221; iTF_00377026; iTF_00638576; iTF_00638761; iTF_01336048; iTF_01335850; iTF_01428977; iTF_01429166; iTF_01183026; iTF_01182594; iTF_00686259; iTF_00686477; iTF_01509715; iTF_01509511; iTF_00632887; iTF_00632683; iTF_00318200; iTF_00318035; iTF_00361754; iTF_00361538; iTF_01219708; iTF_01219885; iTF_01171390; iTF_01171577; iTF_00663008; iTF_00663202; iTF_01170496; iTF_01170707;
90% Identity: iTF_00119714;
80% Identity: iTF_00119714;