Aant015923.1
Basic Information
- Insect
- Anthrax anthrax
- Gene Symbol
- -
- Assembly
- GCA_963971155.1
- Location
- OZ020118.1:30698402-30699997[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.02 2.2e+02 2.9 0.2 21 43 245 267 239 272 0.84 2 9 0.001 11 7.0 0.2 21 50 273 301 269 304 0.85 3 9 0.001 11 7.0 0.4 18 45 297 324 295 327 0.87 4 9 0.0073 80 4.3 0.1 21 52 328 359 324 360 0.87 5 9 0.0081 88 4.2 0.1 21 46 356 381 352 388 0.85 6 9 0.0023 25 5.9 0.1 21 46 412 437 404 445 0.85 7 9 0.26 2.8e+03 -0.6 0.0 21 43 440 462 436 470 0.85 8 9 0.0038 41 5.2 0.1 23 52 470 499 465 500 0.88 9 9 5.9e-08 0.00064 20.6 0.1 21 49 496 524 494 528 0.91
Sequence Information
- Coding Sequence
- ATGGCTGGTAAAATGTTAGAAATGAAAAGTATTTTATTGGCTGATTTTATAGCAGAGAGTTGTAGTAATTTTTCAACTGAGGATGATGAGGATAATGAGgaagaagaaaataatgatgataatacTAATGAAAATAACCATGAAAATGAAAGTGTAACAGATCTGGAATCATTATCTGATAATGAAGAACAGTTTTTAACAGAGGATATGATTAAAGAAGAAccaaaatgtatgtatgaagATGATACAGAacgtaataaaatttataaatatttgaaacaaaataatttaaatgaatatgaagaaaataaattaaattggCATACATGTGTTATTTGTGAAGAACGATTTTTAGATATTGAAGAATTATCAAAACATATTAAAgaacatattaaaaatgaaaaaaatcaattatcATTACAATtatcgaaaaaaaatttactagAAAGACATTGTACACCAAAGACAAAACAATTAACTGGTTTTAAACGTGAAGAATTATTTCGTGATTATATTcaaattgatgaaaatttaaatggtGATACAGTATATTCATGTAAATTATGTTTAATAACAAATCCagataatgataaattttttacaacaTTAACTGGTGTACGTAATCATATGCGAATTCATGAGAATCCTGTTTATAAAGAACGTAATTGTCATATATGTAAAAGATCATTTTTACGACGTGACACATTACTTGTACATTTAAGAACTCATACACAAGAACGTCCATACaaatgtaatgtatgtaaaGCAACATTTTCGCATTCAAGTTCATTGGTATCACATAAACGTATTCATACTGGTGAAAAACCATATGAATGTGATATATGTAATAATCGATTTCGTGAATCTGGACAAATGCGTGCACATCGTCGTAcacattttgaaaaaaatttagaatGTTCATTATGTCAACAATTATTTGTATCATCAAAAAATTTACGTGCACATTTACGTACGCATACTGGCGAAAGACCATATAAATGCTCTAATTGTAATAAAACATTTCGTACATCTACTGGTTTAACAACACATTTACGTATTCATACTGGTGAGAAACCATATAAATGTTCATATTGTTCATATGCATCAAAACAATCTAGTACATTAAAATCTCATATGCGTACACATACTGGAGaaaaaccatttaaatgtgatcGTTGTGATAAACGATATGCTAATAAAAAACGTTTAACAACACATTATCGTACACATACCGGTGAAAGACCATATAAGTGTTCTTATTGTGATTCAACATTTATACGTAGTGATAATCTTCGTTTACATATTCGTACGCATACAGGTGaaaaaccatttaaatgtaatgCTTGTAATAAATCATTTGCACAAAAGACAACACTTAAAACACATGAAAAAGTTCATACTGGTGAAAAACGTTTTAAATGTCCACATTgtcaattaaaatttacacaGTCTGGTACATTAGCAACACATTTACGTCttcataataatgaaaaaccATATGAATGTCAATTATGTGATAAAGCATTTAGACAAAGCGGTAATTTGAAAAGGCATATTGAAATTGATCATAATAAAATACcagaaaatttgtattaa
- Protein Sequence
- MAGKMLEMKSILLADFIAESCSNFSTEDDEDNEEEENNDDNTNENNHENESVTDLESLSDNEEQFLTEDMIKEEPKCMYEDDTERNKIYKYLKQNNLNEYEENKLNWHTCVICEERFLDIEELSKHIKEHIKNEKNQLSLQLSKKNLLERHCTPKTKQLTGFKREELFRDYIQIDENLNGDTVYSCKLCLITNPDNDKFFTTLTGVRNHMRIHENPVYKERNCHICKRSFLRRDTLLVHLRTHTQERPYKCNVCKATFSHSSSLVSHKRIHTGEKPYECDICNNRFRESGQMRAHRRTHFEKNLECSLCQQLFVSSKNLRAHLRTHTGERPYKCSNCNKTFRTSTGLTTHLRIHTGEKPYKCSYCSYASKQSSTLKSHMRTHTGEKPFKCDRCDKRYANKKRLTTHYRTHTGERPYKCSYCDSTFIRSDNLRLHIRTHTGEKPFKCNACNKSFAQKTTLKTHEKVHTGEKRFKCPHCQLKFTQSGTLATHLRLHNNEKPYECQLCDKAFRQSGNLKRHIEIDHNKIPENLY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118886;
- 90% Identity
- iTF_00118886;
- 80% Identity
- iTF_00118886;