Aant016175.1
Basic Information
- Insect
- Anthrax anthrax
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963971155.1
- Location
- OZ020118.1:34583150-34592210[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.21 6.8e+03 -3.1 0.3 50 75 57 82 45 101 0.45 2 4 1 3.3e+04 -6.1 10.7 32 119 181 266 169 310 0.65 3 4 2e-113 6.4e-109 364.7 35.2 1 299 336 621 336 622 0.91 4 4 0.13 4.2e+03 -2.4 4.1 220 244 650 674 626 695 0.46
Sequence Information
- Coding Sequence
- ATGgtacaattaaaattagaaaGTCCGTTAATTGGTAAATACGCAAATCGTTGGGGACCATCATTAAGTGATTGCCTTGAAATTTATGCAACTATACAAAAGGGTATTGCTAATAAAGGAACATGGAAATGTTCATTCgcatataataaaatgtcACAAGTTCAAAAAGAGCAAAAAGATTCAAATCAAATAACAGTTGTTGCATCTACAAATGTTAATAATTCAATTGCTATATCAACTGATGCACATCATAGTGATTctattgaaaatgaattacTTACAGATGTAGAAATAAAACAGGAAAATCAATTAACAATAATTAACACACCTACAACAAATGATTTGATTACAATGAATATAGATAGTGATAACCACCATGAAAAAATGCATATTGTTGATGATAGTGAAGAAatcaacaataataattacaaatcTGATAATAAATCTGATTTAGTAGAATCTGATAATGCATCAAATGAAGaattatttgattttactgataatgaattaaataatttaattaataataatgatagtgatgatgatgatgatgatgatcataATGTGAACaataaagaaatacaaaatttaaataataataataatagcaatgatcatgataataataacagtttaattacaaatgaaataaatttacaaCAATCAACAATTCAAACATCAGAACAAGAGCAACAACAACATAATCATGAGCAAAAATTACATGATTATAAAGAATATAACaatatatttgtaaataatcAACAAATCAATAATAACAATGATAATGATCAATTCAATAATGAATCGAAtcatttaaattgtaataaatttgttaCGGAAACAATTAATGATGTCATTGTGAAtgatcaaaataaaataaaagatcatttaattattaatgATACTATagaagaaaatgatgataatgatgaagatgatgatcAATATTATAGTGATcaagaaaatgaatttattgttaatttcTTAGGAACAGCTAATGAAATAgCAGAGGCTAGATTAGCAGCTAGAAGACAAGCACGTGCTGAAGCACGAGAAATACGAATGCGTGAACTAGAACGTCAACAAAAGGAACAAGAACAAAATGCTGATAGAGTATTTGATATGCAAACAGCAGCTGGTATTGATCCATTATCTAGATCTCGTCTTACAATATCAGCAACAAATTCAACACGAGGTAATTCAATGTCATCACGACGAAGTAGTGAAGATTCCTTGGAAGAAGAAGGACGGAGTTTACGTGATATTAGACatgaattaaaaGACGTTGAAGAAAGATTTCGTAAAGCCATGATAGCAAATGCCCAATTAGATAATGAAAGAGCATCACAATCTTATCAAATTCAACTACTTAAAGATAAATTAGAAGAAATGGAAGAATCATATGCTCAATTACAAAGGGAATATAAAGAGAAATGTCGTGATCATAATGCCTTAAAACGTAATTTGGATAAATTAGatgaagaattaaaattagTACGTGGGCAATTAGAAGAACGTGATACACTTATTACTGAACAAGGATTAGTTATAGTGTTAGTAGAAAATGAAGATGGTACAGATGCTAAACGTGCTCTAGTCACTATGGAAAATGCACAATTATTAGGTTCTGTTCAAGGTTCTTTAGATGTACGACTTAAGAGATTTACTGAAGAAAAACAGCAGTTACAAAAAGAAGTCCAAAGTCTTCAACAGcaattaaatgatttaaaaacCCAAGGTAGAAGAGGTAGCTCCATGAATGGTCCATTAGGAACAGATGACGATTACGATGCTCAGAGAGAggcaaataaaattatagcagattataaatataaattacaaaaagcTGAACAAGAAATAGCTAGTCTACAAGCAAGTTTAGCTAGATCAGAAACGCAAGTAATACGTTATAAGAGTACAGCTGAAGCAGCCGAAAAAGCTGAAGCTGAACTAAAAATTGAACGTAGGAAACTTCAAAGAGAGAATCGTGAAGCAATGGAACGCCTAGAAGAATTAGAAACAACAAATAATCATTTATTAAAACGTttagataaattaaaaaatgcTAAAAGTGCATTATTAAAAGATCTCTGA
- Protein Sequence
- MVQLKLESPLIGKYANRWGPSLSDCLEIYATIQKGIANKGTWKCSFAYNKMSQVQKEQKDSNQITVVASTNVNNSIAISTDAHHSDSIENELLTDVEIKQENQLTIINTPTTNDLITMNIDSDNHHEKMHIVDDSEEINNNNYKSDNKSDLVESDNASNEELFDFTDNELNNLINNNDSDDDDDDDHNVNNKEIQNLNNNNNSNDHDNNNSLITNEINLQQSTIQTSEQEQQQHNHEQKLHDYKEYNNIFVNNQQINNNNDNDQFNNESNHLNCNKFVTETINDVIVNDQNKIKDHLIINDTIEENDDNDEDDDQYYSDQENEFIVNFLGTANEIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQTAAGIDPLSRSRLTISATNSTRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESYAQLQREYKEKCRDHNALKRNLDKLDEELKLVRGQLEERDTLITEQGLVIVLVENEDGTDAKRALVTMENAQLLGSVQGSLDVRLKRFTEEKQQLQKEVQSLQQQLNDLKTQGRRGSSMNGPLGTDDDYDAQREANKIIADYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETTNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -