Basic Information

Insect: Anthophora plumipes
Gene Symbol: -
Assembly: GCA_951804975.1
Location: OX638117.1:15141880-15144647[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 9.7 4.9e+03 1.0 0.0 1 8 356 363 356 374 0.88

2 12 8.2 4.1e+03 1.2 3.8 1 20 379 398 379 404 0.88

3 12 5.9e-06 0.003 20.6 3.2 2 23 444 465 443 465 0.97

4 12 9.6e-05 0.049 16.7 0.2 1 23 471 493 471 493 0.98

5 12 3.3e-06 0.0016 21.4 0.9 1 23 499 521 499 521 0.98

6 12 2.2e-05 0.011 18.8 3.3 1 23 527 549 527 549 0.98

7 12 0.00017 0.086 15.9 1.0 1 23 555 577 555 577 0.98

8 12 5.7e-07 0.00029 23.7 0.5 1 23 585 607 585 607 0.98

9 12 0.0052 2.6 11.3 0.2 1 23 613 635 613 635 0.94

10 12 3e-05 0.015 18.4 1.9 1 23 641 663 641 663 0.98

11 12 9.1e-05 0.046 16.8 0.6 1 23 669 691 669 691 0.97

12 12 0.025 13 9.1 5.3 1 23 697 719 697 720 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	9.7	4.9e+03	1.0	0.0	1	8	356	363	356	374	0.88
2	12	8.2	4.1e+03	1.2	3.8	1	20	379	398	379	404	0.88
3	12	5.9e-06	0.003	20.6	3.2	2	23	444	465	443	465	0.97
4	12	9.6e-05	0.049	16.7	0.2	1	23	471	493	471	493	0.98
5	12	3.3e-06	0.0016	21.4	0.9	1	23	499	521	499	521	0.98
6	12	2.2e-05	0.011	18.8	3.3	1	23	527	549	527	549	0.98
7	12	0.00017	0.086	15.9	1.0	1	23	555	577	555	577	0.98
8	12	5.7e-07	0.00029	23.7	0.5	1	23	585	607	585	607	0.98
9	12	0.0052	2.6	11.3	0.2	1	23	613	635	613	635	0.94
10	12	3e-05	0.015	18.4	1.9	1	23	641	663	641	663	0.98
11	12	9.1e-05	0.046	16.8	0.6	1	23	669	691	669	691	0.97
12	12	0.025	13	9.1	5.3	1	23	697	719	697	720	0.95

Sequence Information

Coding Sequence: ATGGCCGTCGTTGAGGAATTTGATTATTTATGCCGTCTATGTGCAACTAAAACGGGGATTTTAATGGGATTACCGATCTTCGAAGCCGGTGATCAAATGCGGAACATTGACAAGAAAATAGCCGCGTGTTTGCCAGTGCAGGTGTCTATGACTGATCAATTACCAAAAGTGGTGTGCGAAGAGTGTGCTTATAAATTAGATCAGTTGTTTGACTTTCGTGAAAAGTGTTTACATACCGAGGGTATGTTCATGGAAATGTTAAAAGAGATTGCCAAGGAAGAGGTTGTTCGTATATCAAAGCAGGActtagaagaagtagaagaaatgAATAGAATTCAAAggaatattaatagaatacagaataatattgaagatgtACAAAACCATGTAACTCCTCGAGAAACAGGAGAAACCACTATACATACTATGCAAGTTATGGATGAGATGGATTTGACAGGTGGTGAACAGGTTGTTACGCAAGAGGAGATAGGCCAACAAGATACTGACATTGAGGTTACTGGTATCGACTGTTTAGATGGTGATACTGTCAGAATGGTGGATGAACATATAAGAGAAGTTTCTAATCATCAAATAGCGATGCATCTAGAAGGAGACATGGCTGTGGTTGGAAATTTAACAGTCAGTGGTCACTTGAGTCAGTTAGGAATAAATTATGTAACTTCGATAAATCCTGAAGATCAGAACCGAGAACCAATAGTACATTATTGTGACAGTGTAAAGTATGAATCTGTACCGATAAAACAAGAATACCATAGGCTACAGGACAGATTAGCCACAGAAGATCCTGCAAATGTACTTGAGAATAATGTATCACATGAGAATTTTCCTTCTACTCAACCGGAAACTGGGAGTGATATAGAGGAAACACATGTAGTTGAAAATGAAATTAGGCATACAACTTCTCAGGCAAATACTATGGCATCAACAAGCCAAGTAACAGCtggaaattctaatattttagtAGAATATACAAAAGGAGCTAAGCATACACTGTTAGAGACAACACTAAATAATCCAACAATCGATGAGACGGGATCACACTGGTATGTGTGTCCGTTTTGTAATGAAGCAATATTAGGTTCGAATAATATGATAGCACATTTTGAACAGTACTTCTGTTGCTGCCCTTGTGGTTTATATTTTACGAGTGTAGACGCGTTAAATGTACATAAGGAACGATGCGATGtacataaaagtaaaataatcagcaaggaaaaagaaattatagaatCAGAATTAACTCCTTCGCAAAATGACGGAAATATAGATGAAAAGAAGCAAACAGTGAGGCAGAAATGGACACCGAAAGTTTGTGCTCATTGTGGAAAGCAATACAGAACGAATTATAAGCTACAGGAACACATGCGAAAACATACCGGGGAAAAACCTTTTCAGTGTGTGACTTGCGAGAAAGCGTTTCGTAGTAAAATAGGACTCGCACAACACACAGCCACTCATACAGGACAGTTCGATTACAATTGTTCAACGTGTGGTAAAGGTTTCCAATCGAAAAGTTATCTCGTTCTTCACCAAAGAGTACATTCAGATCTAAAGCCGTTTCCATGCAACACTTGCGGACaacatttcaaaacgaaacAATCTTTGTTAGATCATCAAAACAGGCATCTCGGAGTTAAGCCTTATGTCTGTGAAATCTGTGGCAGAGGTTTCATAACTAAAGGACTTTGTAAAAGTCATCAAAAGATACATTCGGGTATGGATAATCGTCAGTATCCGTGCGTGGTATGCAATAAGATGTTTGTTAGTAAAAGTTATCTCAACACACATTTACGTATTCATACTGGCGAGAAGCCGTATTTGTGCGAAGTTTGTGGCAAAGGATTTTTAACACGAGTCGATCTCAAAATTCATTCGACGATGCACACCGGAGAAAAAAGCTTTAAATGTGATATGTGCGGAAAAGTATTCGCCAGGAGAGCAGCGTTAAGGTGTCATAGAAGGTTGCACACCGGAGAACGGCCTTACAGATGTGATGTGTGCGGCAAAACGTTTACACAATTCACTCCTATGGCCATTCACAAAAGATTGCATACCGGAGAACGACCATACGAATGTGACGCGTGCGGCAAAACATTCGTATCAAGATCAACCATGATGtgtcataaaaaaaaacacCATGGTGCACCTGTGCAAAAAGATGATCCAGTTCCTCGACAAAGtgagataaaaaatattttaccagCTGAAATTGTACTTCGAGACTCCCAAGAGGGGATACAAATTACCGCAGATTGA
Protein Sequence: MAVVEEFDYLCRLCATKTGILMGLPIFEAGDQMRNIDKKIAACLPVQVSMTDQLPKVVCEECAYKLDQLFDFREKCLHTEGMFMEMLKEIAKEEVVRISKQDLEEVEEMNRIQRNINRIQNNIEDVQNHVTPRETGETTIHTMQVMDEMDLTGGEQVVTQEEIGQQDTDIEVTGIDCLDGDTVRMVDEHIREVSNHQIAMHLEGDMAVVGNLTVSGHLSQLGINYVTSINPEDQNREPIVHYCDSVKYESVPIKQEYHRLQDRLATEDPANVLENNVSHENFPSTQPETGSDIEETHVVENEIRHTTSQANTMASTSQVTAGNSNILVEYTKGAKHTLLETTLNNPTIDETGSHWYVCPFCNEAILGSNNMIAHFEQYFCCCPCGLYFTSVDALNVHKERCDVHKSKIISKEKEIIESELTPSQNDGNIDEKKQTVRQKWTPKVCAHCGKQYRTNYKLQEHMRKHTGEKPFQCVTCEKAFRSKIGLAQHTATHTGQFDYNCSTCGKGFQSKSYLVLHQRVHSDLKPFPCNTCGQHFKTKQSLLDHQNRHLGVKPYVCEICGRGFITKGLCKSHQKIHSGMDNRQYPCVVCNKMFVSKSYLNTHLRIHTGEKPYLCEVCGKGFLTRVDLKIHSTMHTGEKSFKCDMCGKVFARRAALRCHRRLHTGERPYRCDVCGKTFTQFTPMAIHKRLHTGERPYECDACGKTFVSRSTMMCHKKKHHGAPVQKDDPVPRQSEIKNILPAEIVLRDSQEGIQITAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00761134;
90% Identity: iTF_01123217;
80% Identity: -