Basic Information

Insect: Anthophora plumipes
Gene Symbol: RFX7_1
Assembly: GCA_951804975.1
Location: OX638122.1:4365101-4373099[-]

Transcription Factor Domain

TF Family: RFX
Domain: RFX domain
PFAM: PF02257
TF Group: Basic Domians group
Description: RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.6e-33 1.7e-28 101.7 0.1 3 78 172 247 170 248 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.6e-33	1.7e-28	101.7	0.1	3	78	172	247	170	248	0.97

Sequence Information

Coding Sequence: ATGAGTACTGATAACCATGATCAAACTAAACCCTGCGTCAGCAAACCACCCGCAAGAATCGAGCTTAATGCCGACGAAAGCGCGTTCGACGGCAGGCGAATCAAGAAGGAACGAACTGACGTTTCTCTGGAGAATGATGACGGTAGCATCAATGCCGGCATTAATGATAATAACAAGCAATTACAGCCGAGTCAGCGACCGGCTGCCGGTAGATTTTCAAACGGCTTCCACGACGACGACCTACTTCAAGATATCATCGCGGCCAAGTTCACGGCCCTGGCGAATCATGGCACAACCACCAAATACGACAAAATCCGGCTCATGATTGAAGACAGCATCAGtgAAGAATCAAAAACGCATATTCAAgaaattttttcacaaattgaaCAACTgaaagtagaagaaaaattgttgttGTACCTGAAACTTCCATTATCATTGAGTAATACAGGAGGAGCGGTTGATCCTTTGAGACAACCATTAAATCCATTAGGAAATCGTTATGAGATTCATCAAACTATCATGTGGATTAAAACACATTTAGAAGAAGATCCAGATGTTTCTTTACCAAAACAAGAAGTTTATGATGAATATAATATGTATTGCATGCGGAATTCTATGAAACCGTTATCGACTGCTGATTTTGGAAAAGTTATGAAACAAGTATATCCAAGAGTTCGACCACGTAGGCTAGGCACACGAGGCAATTCGCGATACTGTTATGCCGGAATGCGTAAAAGAGTTAAATTGGATCCTCCAACATTGCCTAATATATCTGGCACTCAAACCGGTGATGAAGTAGATGAAAATATTACCGAAGAAATGTTGGGAGCTGCATCTACATTAATCAGAGAATGGGCAGAAAGCCTCTTGGGCTTGAAATTTCCAACTTTGAGTGCCTTAGCACGTCATCTtgttgataatctttgtgttgatACTCGATCTCTATCTGCTGTGTGCATACTATGTGCTTCAGGAAATTCTAATACATCAACAAATAAagAGTCGAATACAGATGTGCGTGTAACATCTATAAGTGGAAAATCTGGAAAACTCAGAGAAGCGCAATtacaattgcaaagaaaattgcAACAACGTGAACATATAAGGGATCAAAAGCACCGTCATCTTGATGCTGTCATACAGAATCAGAACAAAGAGAAGACTGTCGATAATAAAATGGGGACAAATAAGGGAAATAAGAAAACTAAATCCAATCAGTCGTCTCAAGGTGCAAATGTATCAACTGGACAGAATGTGTtaactaaattaaatttatctgcTGTAGTAACCAATCGACACAAAAAAGTTCTTAAAGCTAGTAGTCAGCCATGTAACATCTCCCTGGAATCCAACTGTGATAATATAGTGGTACAATCGATTGAAGATGTACAGAATAATAGCAACCCTAGTGTAGTGATGACCAACTGCGTAAATACACAGCGAGATATCAAACCCAAAATTTCCAGAAAGCGTGCCAATCCAATTCTATTGAACCAACCATCAGAAACCAGTcctgaaaaattaacaaaacttACAGAACAACAAATACAAGAGAATGTAGAGCATTCCAATGTATTGTTGCCTAAGCTCACATCCATACAACGCCCCGGaaaaatttcggtgattctagctGGTAATCTGAAACCTACCAAGTGCAAAGTGAGTGAAGCTGCCAACAATCAGCCTACTAAAAACTGTGATAACGAACCATCAACATACTCCAAAAGTTGCATTAAAGTAAATGGTTGTCCTAACAGTTTTGATACTAATTCAAATACAACAGAGGAATCTACAGTTTTAACTAAAGACCAAATTCGATTATTACAAGAAAATTCAAATCTCGCTGGTAAAACCGGAAAACTTGGCTCAATTGATTCGGATACTTTAGATGATTACTTGAATGGAGGTAACAACTCTCAAGAACAAGAGGAAGAATTATTACAGTATTTTCAACAAAGTAATTCATCGAGTTCAGATGTGGAAGCAAATACTATTGCCATTGATGAACAAATATCAAGATCTGATAAAGTTTCGCAGTTAAGATTAATATTACAACAGAATTTGAAAGGAACTGTACATGCACCCGCTGATGTACTATCTACTACTATCATCagacaaaatgttgaaaaacgtgaaattactcAAAAGCATAACTTGATACTACCAACTTTATTAAACCATTCAACTCAAAGTAACACTAGACGTAGAGTTAGTTTTGAAACTAACGTTGTAGAACATGTACAAGATTCAAGTATTATTACTAATACAGTTCCACAAAGTCCAAATACACGCCgtcgaatatttaattttacgcCAATATCGCCAGGCCCGCATTCACCCATTAATGGTCGCGCTTCCAAGTCTAATTCTGCGAACGCCAGTCCATTTGTTTCACCACGAAATACGCCTGTGCCACGCTCGAGGAGTAATTTGCAAGCAAGTAGCTCTAGAGCTCGCGCTCATAAATCCTTGTCACGTTCAATATCTTGCAGCATGCCTTACACTAGTAAGAATGATACCTTCGTTGTTCCCACAAGTGGTCCGGATTTAGTTAGACAAACATCATCTACGCCACAGTTACCGTTGATTTCTACCAAATCGTCGGAAGTGCAGGTAGATACCAACACAACGCAAATTTCCGTTACACCAAAAAGAGAAGGACAAGGACCACAGTGTGCTGCATTTTTATCTTCCGATTTAGTACCGCAAAAACAATTACTTATTAATTATCCAAGTCAGGAAAATTTACAAGAAATTAAGAATGTTTATCAAAAAAATCAGCCTGATCAAGAAATTAGCGAATTGTTTCATAATAACAAACAATTTACCAATGAACTTTACAGATCGCAATCAGTTCCGTTACACAGAATGGTTAACCCTGCGTTAATGTCACCTATTTCGACACAACATTGCTTGTCATCCTTTCAGAGTCAGAGTTTTAATGCGTCTACAAGCAGTTCTGTAGCACCTACACCAGTCCCTAGTGAATTCAATGATTTTGGATCAATAGGTCAACCAGAAGGAACTTCAACGTACTTACTCGATGATGTTGATCCAAATTTTATATCAGATGACCAAAATTTCTTAATGGGTGACAAAGAAATTACGCCTGAAAACATAACaaatatattgaatattttagatGAAGAAGGAACACAAAGTTTGCAAATACTGCCAGAACAACCTGCAGAAGAAGGCTTAATAGAAAACAATTCAATAGTGTTGGATGCTTTGCCAAATTCAAACTTAAACTTATCAGAAGAAGATATGTTAGATCCATCAAATGTACTTGATATTCCAGTAGGTGGAGCTTTACAGAAAATGATACAGTCACGTTCTTATCCTAATACACCACTACCTGTGCCAGTATCTACATATACACCATCTTATACAGAAGATAGTAATGGATCAAGATCGTATCCTTCAACACCATTGCATACAGTTCAATCACAAGAAACTTATCAGGAGACTACTGAACCAATGCTTTCAAGTCCTACTTTGAACTCTTTAAATTTACACAGTGAAACTGCAAACGAATCTGTTTCTAACAGTTTATGTAGAAATGTTGTGGATTTGCTAGAAGCCAATTTTCTTGGAGAAACTGATACCGAAACAAATGATTTGGACCCACTTGGTAATTTTGATGGATTACAGGATGTTGATTCATTAACACCTTTATTTAATGAAGTGACAGAGCCTAATCGTTGA
Protein Sequence: MSTDNHDQTKPCVSKPPARIELNADESAFDGRRIKKERTDVSLENDDGSINAGINDNNKQLQPSQRPAAGRFSNGFHDDDLLQDIIAAKFTALANHGTTTKYDKIRLMIEDSISEESKTHIQEIFSQIEQLKVEEKLLLYLKLPLSLSNTGGAVDPLRQPLNPLGNRYEIHQTIMWIKTHLEEDPDVSLPKQEVYDEYNMYCMRNSMKPLSTADFGKVMKQVYPRVRPRRLGTRGNSRYCYAGMRKRVKLDPPTLPNISGTQTGDEVDENITEEMLGAASTLIREWAESLLGLKFPTLSALARHLVDNLCVDTRSLSAVCILCASGNSNTSTNKESNTDVRVTSISGKSGKLREAQLQLQRKLQQREHIRDQKHRHLDAVIQNQNKEKTVDNKMGTNKGNKKTKSNQSSQGANVSTGQNVLTKLNLSAVVTNRHKKVLKASSQPCNISLESNCDNIVVQSIEDVQNNSNPSVVMTNCVNTQRDIKPKISRKRANPILLNQPSETSPEKLTKLTEQQIQENVEHSNVLLPKLTSIQRPGKISVILAGNLKPTKCKVSEAANNQPTKNCDNEPSTYSKSCIKVNGCPNSFDTNSNTTEESTVLTKDQIRLLQENSNLAGKTGKLGSIDSDTLDDYLNGGNNSQEQEEELLQYFQQSNSSSSDVEANTIAIDEQISRSDKVSQLRLILQQNLKGTVHAPADVLSTTIIRQNVEKREITQKHNLILPTLLNHSTQSNTRRRVSFETNVVEHVQDSSIITNTVPQSPNTRRRIFNFTPISPGPHSPINGRASKSNSANASPFVSPRNTPVPRSRSNLQASSSRARAHKSLSRSISCSMPYTSKNDTFVVPTSGPDLVRQTSSTPQLPLISTKSSEVQVDTNTTQISVTPKREGQGPQCAAFLSSDLVPQKQLLINYPSQENLQEIKNVYQKNQPDQEISELFHNNKQFTNELYRSQSVPLHRMVNPALMSPISTQHCLSSFQSQSFNASTSSSVAPTPVPSEFNDFGSIGQPEGTSTYLLDDVDPNFISDDQNFLMGDKEITPENITNILNILDEEGTQSLQILPEQPAEEGLIENNSIVLDALPNSNLNLSEEDMLDPSNVLDIPVGGALQKMIQSRSYPNTPLPVPVSTYTPSYTEDSNGSRSYPSTPLHTVQSQETYQETTEPMLSSPTLNSLNLHSETANESVSNSLCRNVVDLLEANFLGETDTETNDLDPLGNFDGLQDVDSLTPLFNEVTEPNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141013;
90% Identity: iTF_01066691; iTF_01065988; iTF_01070091; iTF_01068720; iTF_01065297; iTF_01069393; iTF_01067354; iTF_01068029; iTF_00223619; iTF_00226340; iTF_00216133; iTF_00218854; iTF_00221002; iTF_00222282; iTF_00227021; iTF_00229101; iTF_00229774; iTF_00224303; iTF_00218161; iTF_00221681; iTF_00232977; iTF_00214770; iTF_00216818; iTF_00231059; iTF_00227700; iTF_00228404; iTF_00222935; iTF_00217496; iTF_00224984; iTF_00225656; iTF_00230456; iTF_00215450; iTF_00220218; iTF_00219547; iTF_00684557; iTF_00683914; iTF_00982030; iTF_00733733; iTF_01417450; iTF_00983377; iTF_00982707; iTF_01539347; iTF_00873560; iTF_01418114; iTF_01420038; iTF_01420679; iTF_01419392; iTF_00760733; iTF_00085028; iTF_00085908; iTF_00086844; iTF_00084273; iTF_00087672; iTF_00088525; iTF_00141013; iTF_00141579; iTF_00142227; iTF_00140329; iTF_00359959; iTF_00360653;
80% Identity: -